RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 DEFB132Q7Z7B7 95 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 DUSP18Q8NEJ0 188 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 OR52E1Q8NGJ3 308 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 ZNF426Q9BUY5 554 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 SFXN1Q9H9B4 322 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 H3BQ06 376 aaPredicted RBP7.55□□□□□ -1.2
APOB-201ENST00000233242 TRAF3IP2O43734 574 aaPredicted RBP7.55□□□□□ -1.2
APOB-201ENST00000233242 SPNP16150 400 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 OR4F5Q8NH21 305 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 OR4F4Q96R69 305 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 SLC35B3Q9H1N7 401 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 LYRM4Q9HD34 91 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 NPIPA5A0A0B4J1W7 369 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 PJVKQ0ZLH3 352 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 IGSF11Q5DX21 431 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 PLPP7Q8NBV4 271 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 KLF16Q9BXK1 252 aaPredicted RBP7.55□□□□□ -1.2
APOB-201ENST00000233242 RIMS4Q9H426 269 aaPredicted RBP7.55□□□□□ -1.2
APOB-201ENST00000233242 CHST2Q9Y4C5 530 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 ANKUB1A6NFN9 424 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 LY86O95711 162 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 IQCF3P0C7M6 154 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 HOXD9P28356 352 aaPredicted RBP7.55□□□□□ -1.2
APOB-201ENST00000233242 ESPNLQ6ZVH7 1005 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 DTWD2Q8NBA8 298 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 DMBX1Q8NFW5 382 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 LHX4Q969G2 390 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 PLK3Q9H4B4 646 aa7.55□□□□□ -1.2
APOB-201ENST00000233242 GDF2Q9UK05 429 aaPredicted RBP7.55□□□□□ -1.2
APOB-201ENST00000233242 EPHA4P54764 986 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 WDR89Q96FK6 387 aaPredicted RBP7.54□□□□□ -1.2
APOB-201ENST00000233242 SLC25A37Q9NYZ2 338 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 NDUFB6O95139 128 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 CST4P01036 141 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 ARNTP27540 789 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 OR10A3P58181 314 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 CMTM2Q8TAZ6 248 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 FLVCR1Q9Y5Y0 555 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 A0A1B0GTW7 788 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 RAB27BO00194 218 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 SMAD6O43541 496 aaKnown RBP7.54□□□□□ -1.2
APOB-201ENST00000233242 LIMS3P0CW19 117 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 LIMS4P0CW20 117 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 PLGLAQ15195 96 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 TMEM183BQ1AE95 376 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 TMEM128Q5BJH2 165 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 FAM74A1Q5RGS3 127 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 MOB3CQ70IA8 216 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 SLC35D1Q9NTN3 355 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 GPR160Q9UJ42 338 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 PCDHGA1Q9Y5H4 931 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 TMEM88BA6NKF7 163 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 NQO2P16083 231 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 EGR3Q06889 387 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 PRR18Q8N4B5 295 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 TMEM229BQ8NBD8 167 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 OR5AP2Q8NGF4 316 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 SAT2Q96F10 170 aaPredicted RBP7.54□□□□□ -1.2
APOB-201ENST00000233242 HINT3Q9NQE9 182 aaKnown RBP7.54□□□□□ -1.2
APOB-201ENST00000233242 GNG12Q9UBI6 72 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 NUP98P52948 1817 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 YY2O15391 372 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 COX5AP20674 150 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 CDK5R1Q15078 307 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 GJC3Q8NFK1 279 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 INTS12Q96CB8 462 aaKnown RBP7.54□□□□□ -1.2
APOB-201ENST00000233242 TRAF4Q9BUZ4 470 aaPredicted RBP7.54□□□□□ -1.2
APOB-201ENST00000233242 FER1L6Q2WGJ9 1857 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 M0R143 59 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 HNRNPA2B1P22626 353 aaKnown RBP7.54□□□□□ -1.2
APOB-201ENST00000233242 JAG1P78504 1218 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 TMEM71Q6P5X7 295 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 RHOUQ7L0Q8 258 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 PRSS45Q7RTY3 260 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 ULBP2Q9BZM5 246 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 TRAPPC2LQ9UL33 140 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 IGLV3-10A0A075B6K4 115 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 AP4M1O00189 453 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 GSTP1P09211 210 aaKnown RBP7.54□□□□□ -1.2
APOB-201ENST00000233242 TAS2R45P59539 299 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 HIST1H3AP68431 136 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 ARHGEF39Q8N4T4 335 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 TMEM99Q8N816 258 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 ZDHHC22Q8N966 263 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 SLC38A9Q8NBW4 561 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 DHODHQ02127 395 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 BCDIN3DQ7Z5W3 292 aaKnown RBP7.54□□□□□ -1.2
APOB-201ENST00000233242 MCATQ8IVS2 390 aaKnown RBP7.54□□□□□ -1.2
APOB-201ENST00000233242 NXF5Q9H1B4 397 aaKnown RBP7.54□□□□□ -1.2
APOB-201ENST00000233242 ZDHHC11Q9H8X9 412 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 LAMB4A4D0S4 1761 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 LOC107986453A0A1B0GWG9 222 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 IL10RAQ13651 578 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 VWA2Q5GFL6 755 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 GAS2L1Q99501 681 aaPredicted RBP7.54□□□□□ -1.2
APOB-201ENST00000233242 CRLF2Q9HC73 371 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 MMACHCQ9Y4U1 282 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 LDB3O75112 727 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 NTSR1P30989 418 aa7.54□□□□□ -1.2
APOB-201ENST00000233242 NCR3LG1Q68D85 454 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms