RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 KDM4DQ6B0I6 523 aa7.58□□□□□ -1.2
SPARC-201ENST00000231061 ZNF705AQ6ZN79 300 aaPredicted RBP7.58□□□□□ -1.2
SPARC-201ENST00000231061 LRRC28Q86X40 367 aaPredicted RBP7.58□□□□□ -1.2
SPARC-201ENST00000231061 VN1R3Q9BXE9 311 aa7.58□□□□□ -1.2
SPARC-201ENST00000231061 TPT1P8Q9HAU6 139 aa7.58□□□□□ -1.2
SPARC-201ENST00000231061 SPHK2Q9NRA0 654 aa7.58□□□□□ -1.2
SPARC-201ENST00000231061 PLEKHJ1Q9NW61 149 aa7.58□□□□□ -1.2
SPARC-201ENST00000231061 OR52A1Q9UKL2 312 aa7.58□□□□□ -1.2
SPARC-201ENST00000231061 FBXO7Q9Y3I1 522 aa7.58□□□□□ -1.2
SPARC-201ENST00000231061 KIAA0100Q14667 2235 aaKnown RBP7.58□□□□□ -1.2
SPARC-201ENST00000231061 LOC105371242A0A075B767 164 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 A0A1W2PQU0 124 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 FITM1A5D6W6 292 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 TBC1D3BA6NDS4 549 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 ZNF705GA8MUZ8 300 aaPredicted RBP7.57□□□□□ -1.2
SPARC-201ENST00000231061 EFCAB9A8MZ26 197 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 C9orf172C9J069 976 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 GGCTO75223 188 aaKnown RBP7.57□□□□□ -1.2
SPARC-201ENST00000231061 HOXB6P17509 224 aaKnown RBP7.57□□□□□ -1.2
SPARC-201ENST00000231061 TNFRSF1BP20333 461 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 TIMP3P35625 211 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 UBXN2BQ14CS0 331 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 PCK2Q16822 640 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 ZNF404Q494X3 552 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 TBC1D3GQ6DHY5 549 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 CAPN13Q6MZZ7 669 aaPredicted RBP7.57□□□□□ -1.2
SPARC-201ENST00000231061 SIGLEC15Q6ZMC9 328 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 SERPINA11Q86U17 422 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 CMTM8Q8IZV2 173 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 OR4F15Q8NGB8 312 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 OR52B4Q8NGK2 314 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 SLC7A13Q8TCU3 470 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 OSTF1Q92882 214 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 SCAMP4Q969E2 229 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 POP5Q969H6 163 aaKnown RBP7.57□□□□□ -1.2
SPARC-201ENST00000231061 SLC6A18Q96N87 628 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 RIOK2Q9BVS4 552 aaKnown RBP7.57□□□□□ -1.2
SPARC-201ENST00000231061 ACOT13Q9NPJ3 140 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 NECTIN3Q9NQS3 549 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 VPS29Q9UBQ0 182 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 TMEM184BQ9Y519 407 aaPredicted RBP7.57□□□□□ -1.2
SPARC-201ENST00000231061 SEMA7AO75326 666 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 LALBAP00709 142 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 GTF2F2P13984 249 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 SMAGPQ0VAQ4 97 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 CPTPQ5TA50 214 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 LIPKQ5VXJ0 399 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 WDR25Q64LD2 544 aaPredicted RBP7.57□□□□□ -1.2
SPARC-201ENST00000231061 ALKAL2Q6UX46 152 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 SVBPQ8N300 66 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 ZNF664Q8N3J9 261 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 ZFP41Q8N8Y5 198 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 ZNF480Q8WV37 535 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 MRPS31Q92665 395 aaKnown RBP7.57□□□□□ -1.2
SPARC-201ENST00000231061 TCTN2Q96GX1 697 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 WWTR1Q9GZV5 400 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 GABARAPL1Q9H0R8 117 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 SMG9Q9H0W8 520 aaKnown RBP7.57□□□□□ -1.2
SPARC-201ENST00000231061 DUSP21Q9H596 190 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 SGK2Q9HBY8 427 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 MRPL17Q9NRX2 175 aaKnown RBP7.57□□□□□ -1.2
SPARC-201ENST00000231061 RHCGQ9UBD6 479 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 E7EQ34 232 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 BHLHE40O14503 412 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 SLC19A2O60779 497 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 ATP1B2P14415 290 aaPredicted RBP7.57□□□□□ -1.2
SPARC-201ENST00000231061 CD22P20273 847 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 TMPRSS3P57727 454 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 IKZF1Q13422 519 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 POM121L1PQ3SYA9 428 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 GGTA1PQ4G0N0 100 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 ZNF766Q5HY98 468 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 PNCKQ6P2M8 343 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 C5orf24Q7Z6I8 188 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 PTOV1Q86YD1 416 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 LGALS12Q96DT0 336 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 YIPF6Q96EC8 236 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 HRASLS5Q96KN8 279 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 METTL17Q9H7H0 456 aaPredicted RBP7.57□□□□□ -1.2
SPARC-201ENST00000231061 THSD1Q9NS62 852 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 ADAM29Q9UKF5 820 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 PIKFYVEQ9Y2I7 2098 aa7.57□□□□□ -1.2
SPARC-201ENST00000231061 TNFRSF11BO00300 401 aa7.56□□□□□ -1.2
SPARC-201ENST00000231061 ITGB2P05107 769 aa7.56□□□□□ -1.2
SPARC-201ENST00000231061 DPP4P27487 766 aa7.56□□□□□ -1.2
SPARC-201ENST00000231061 SLC6A12P48065 614 aa7.56□□□□□ -1.2
SPARC-201ENST00000231061 MMP16P51512 607 aa7.56□□□□□ -1.2
SPARC-201ENST00000231061 TMEM115Q12893 351 aaPredicted RBP7.56□□□□□ -1.2
SPARC-201ENST00000231061 GUCA2BQ16661 112 aa7.56□□□□□ -1.2
SPARC-201ENST00000231061 BSXQ3C1V8 233 aa7.56□□□□□ -1.2
SPARC-201ENST00000231061 TPRG1LQ5T0D9 272 aa7.56□□□□□ -1.2
SPARC-201ENST00000231061 ZNF585AQ6P3V2 769 aa7.56□□□□□ -1.2
SPARC-201ENST00000231061 C22orf39Q6P5X5 142 aa7.56□□□□□ -1.2
SPARC-201ENST00000231061 LINC00299Q6ZSB3 139 aa7.56□□□□□ -1.2
SPARC-201ENST00000231061 CBLL1Q75N03 491 aa7.56□□□□□ -1.2
SPARC-201ENST00000231061 GAREM2Q75VX8 874 aa7.56□□□□□ -1.2
SPARC-201ENST00000231061 KCNG3Q8TAE7 436 aa7.56□□□□□ -1.2
SPARC-201ENST00000231061 HPSE2Q8WWQ2 592 aa7.56□□□□□ -1.2
SPARC-201ENST00000231061 C11orf40Q8WZ69 217 aa7.56□□□□□ -1.2
SPARC-201ENST00000231061 FAM3CQ92520 227 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms