RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 C10orf53Q8N6V4 93 aa12.61□□□□□ -0.39
SCNN1A-201ENST00000228916 OR4A4PQ8NGN8 299 aa12.61□□□□□ -0.39
SCNN1A-201ENST00000228916 FAM174AQ8TBP5 190 aa12.61□□□□□ -0.39
SCNN1A-201ENST00000228916 FAM3CQ92520 227 aa12.61□□□□□ -0.39
SCNN1A-201ENST00000228916 MRGPRFQ96AM1 343 aa12.61□□□□□ -0.39
SCNN1A-201ENST00000228916 SPACA7Q96KW9 195 aa12.61□□□□□ -0.39
SCNN1A-201ENST00000228916 SEC11CQ9BY50 192 aa12.61□□□□□ -0.39
SCNN1A-201ENST00000228916 ELOVL3Q9HB03 270 aa12.61□□□□□ -0.39
SCNN1A-201ENST00000228916 FANCFQ9NPI8 374 aa12.61□□□□□ -0.39
SCNN1A-201ENST00000228916 C2orf16Q68DN1 1984 aa12.61□□□□□ -0.39
SCNN1A-201ENST00000228916 A0A1W2PPC1 479 aa12.61□□□□□ -0.39
SCNN1A-201ENST00000228916 MEX3AA1L020 520 aaKnown RBP12.61□□□□□ -0.39
SCNN1A-201ENST00000228916 HRKO00198 91 aa12.61□□□□□ -0.39
SCNN1A-201ENST00000228916 RAD1O60671 282 aa12.61□□□□□ -0.39
SCNN1A-201ENST00000228916 CRYBA1P05813 215 aa12.61□□□□□ -0.39
SCNN1A-201ENST00000228916 PNMTP11086 282 aa12.61□□□□□ -0.39
SCNN1A-201ENST00000228916 LIPCP11150 499 aa12.61□□□□□ -0.39
SCNN1A-201ENST00000228916 TACR3P29371 465 aa12.61□□□□□ -0.39
SCNN1A-201ENST00000228916 NPBWR1P48145 328 aa12.61□□□□□ -0.39
SCNN1A-201ENST00000228916 NAAAQ02083 359 aa12.61□□□□□ -0.39
SCNN1A-201ENST00000228916 PMPCAQ10713 525 aa12.61□□□□□ -0.39
SCNN1A-201ENST00000228916 GPR18Q14330 331 aa12.61□□□□□ -0.39
SCNN1A-201ENST00000228916 MEF2DQ14814 521 aa12.61□□□□□ -0.39
SCNN1A-201ENST00000228916 SLC17A1Q14916 467 aa12.61□□□□□ -0.39
SCNN1A-201ENST00000228916 HYAL4Q2M3T9 481 aa12.61□□□□□ -0.39
SCNN1A-201ENST00000228916 PLEKHN1Q494U1 663 aaPredicted RBP12.61□□□□□ -0.39
SCNN1A-201ENST00000228916 PRRT3Q5FWE3 981 aa12.61□□□□□ -0.39
SCNN1A-201ENST00000228916 TEX30Q5JUR7 227 aa12.61□□□□□ -0.39
SCNN1A-201ENST00000228916 PAPD4Q6PIY7 484 aaKnown RBP12.61□□□□□ -0.39
SCNN1A-201ENST00000228916 OR14C36Q8NHC7 312 aa12.61□□□□□ -0.39
SCNN1A-201ENST00000228916 PAQR8Q8TEZ7 354 aa12.61□□□□□ -0.39
SCNN1A-201ENST00000228916 SFT2D1Q8WV19 159 aa12.61□□□□□ -0.39
SCNN1A-201ENST00000228916 PRRT1Q99946 306 aa12.61□□□□□ -0.39
SCNN1A-201ENST00000228916 SLC22A13Q9Y226 551 aa12.61□□□□□ -0.39
SCNN1A-201ENST00000228916 SLC31A1O15431 190 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 GPANK1O95872 356 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 ADH1BP00325 375 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 TPT1P13693 172 aaKnown RBP12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 IGFBP3P17936 291 aaPredicted RBP12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 NR0B1P51843 470 aaKnown RBP12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 RAB38P57729 211 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 RPL18Q07020 188 aaKnown RBP12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 GLYATL3Q5SZD4 288 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 AVPI1Q5T686 147 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 TMEM184AQ6ZMB5 413 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 RNF44Q7L0R7 432 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 CNTNAP3BQ96NU0 1288 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 CMSS1Q9BQ75 279 aaKnown RBP12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 PRMT8Q9NR22 394 aaPredicted RBP12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 MRPS18BQ9Y676 258 aaKnown RBP12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 EYSQ5T1H1 3165 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 TRBV6-7A0A0A0MS04 114 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 TEX13DA0A0J9YY54 714 aaPredicted RBP12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 RENP00797 406 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 DCNP07585 359 aaKnown RBP12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 KCNJ3P48549 501 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 EGR4Q05215 589 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 MEP1BQ16820 701 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 PNLIPRP3Q17RR3 467 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 WBP2NLQ6ICG8 309 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 CORO6Q6QEF8 472 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 RD3Q7Z3Z2 195 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 ADGRE4PQ86SQ3 457 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 ZNF440Q8IYI8 595 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 ZDHHC22Q8N966 263 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 RNF141Q8WVD5 230 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 ASB5Q8WWX0 329 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 ZNF587Q96SQ5 575 aaPredicted RBP12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 PHB2Q99623 299 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 SYT4Q9H2B2 425 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 Q9N2J8 555 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 MMP26Q9NRE1 261 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 POM121BA6NF01 834 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 ZNF208O43345 1280 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 PNPP00491 289 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 F12P00748 615 aaPredicted RBP12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 CT45A8P0DMV1 189 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 CT45A9P0DMV2 189 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 PGAM2P15259 253 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 ABOP16442 354 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 FSTP19883 344 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 MOGAT2Q3SYC2 334 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 CT45A2Q5DJT8 189 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 FAHD2BQ6P2I3 314 aaPredicted RBP12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 OR4S1Q8NGB4 309 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 OR4K17Q8NGC6 315 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 RXFP4Q8TDU9 374 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 RNF128Q8TEB7 428 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 FOXRED1Q96CU9 486 aaPredicted RBP12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 FAHD2AQ96GK7 314 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 GAL3ST1Q99999 423 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 ZMAT3Q9HA38 289 aaKnown RBP12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 ACKR4Q9NPB9 350 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 GDE1Q9NZC3 331 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 PCOLCE2Q9UKZ9 415 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 DHDHQ9UQ10 334 aa12.6□□□□□ -0.39
SCNN1A-201ENST00000228916 FAM25EA8MYX2 175 aa12.59□□□□□ -0.39
SCNN1A-201ENST00000228916 CRHP06850 196 aa12.59□□□□□ -0.39
SCNN1A-201ENST00000228916 AVPR2P30518 371 aa12.59□□□□□ -0.39
SCNN1A-201ENST00000228916 PHF19Q5T6S3 580 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms