RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 MPTX1A8MV57 137 aa11.16□□□□□ -0.62
NUP88-201ENST00000225696 F12P00748 615 aaPredicted RBP11.16□□□□□ -0.62
NUP88-201ENST00000225696 APEHP13798 732 aaKnown RBP11.16□□□□□ -0.62
NUP88-201ENST00000225696 BDKRB2P30411 391 aa11.16□□□□□ -0.62
NUP88-201ENST00000225696 SCAND1P57086 179 aa11.16□□□□□ -0.62
NUP88-201ENST00000225696 TAS2R19P59542 299 aa11.16□□□□□ -0.62
NUP88-201ENST00000225696 SPOCK1Q08629 439 aa11.16□□□□□ -0.62
NUP88-201ENST00000225696 SERTAD2Q14140 314 aa11.16□□□□□ -0.62
NUP88-201ENST00000225696 STK11Q15831 433 aa11.16□□□□□ -0.62
NUP88-201ENST00000225696 C11orf87Q6NUJ2 197 aa11.16□□□□□ -0.62
NUP88-201ENST00000225696 PARM1Q6UWI2 310 aa11.16□□□□□ -0.62
NUP88-201ENST00000225696 PRR22Q8IZ63 422 aa11.16□□□□□ -0.62
NUP88-201ENST00000225696 PUSL1Q8N0Z8 303 aaKnown RBP11.16□□□□□ -0.62
NUP88-201ENST00000225696 BPIFB2Q8N4F0 458 aa11.16□□□□□ -0.62
NUP88-201ENST00000225696 GVQW1Q8N7I0 195 aa11.16□□□□□ -0.62
NUP88-201ENST00000225696 OR8B4Q96RC9 309 aa11.16□□□□□ -0.62
NUP88-201ENST00000225696 CST11Q9H112 138 aa11.16□□□□□ -0.62
NUP88-201ENST00000225696 TMED7Q9Y3B3 224 aa11.16□□□□□ -0.62
NUP88-201ENST00000225696 NOP16Q9Y3C1 178 aaKnown RBP11.16□□□□□ -0.62
NUP88-201ENST00000225696 FAM25EA8MYX2 175 aa11.16□□□□□ -0.62
NUP88-201ENST00000225696 ABCD4O14678 606 aa11.16□□□□□ -0.62
NUP88-201ENST00000225696 ZNF432O94892 652 aa11.16□□□□□ -0.62
NUP88-201ENST00000225696 GUSBP08236 651 aa11.16□□□□□ -0.62
NUP88-201ENST00000225696 MELTFP08582 738 aa11.16□□□□□ -0.62
NUP88-201ENST00000225696 SPARCP09486 303 aa11.16□□□□□ -0.62
NUP88-201ENST00000225696 CFPP27918 469 aa11.16□□□□□ -0.62
NUP88-201ENST00000225696 CD34P28906 385 aa11.16□□□□□ -0.62
NUP88-201ENST00000225696 OR52W1Q6IF63 320 aa11.16□□□□□ -0.62
NUP88-201ENST00000225696 MARCH3Q86UD3 253 aa11.16□□□□□ -0.62
NUP88-201ENST00000225696 TMEM229BQ8NBD8 167 aa11.16□□□□□ -0.62
NUP88-201ENST00000225696 ACBD4Q8NC06 268 aa11.16□□□□□ -0.62
NUP88-201ENST00000225696 SLC37A2Q8TED4 501 aa11.16□□□□□ -0.62
NUP88-201ENST00000225696 BADQ92934 168 aa11.16□□□□□ -0.62
NUP88-201ENST00000225696 NKD1Q969G9 470 aa11.16□□□□□ -0.62
NUP88-201ENST00000225696 DGAT2Q96PD7 388 aa11.16□□□□□ -0.62
NUP88-201ENST00000225696 CMKLR1Q99788 373 aa11.16□□□□□ -0.62
NUP88-201ENST00000225696 PDCD10Q9BUL8 212 aa11.16□□□□□ -0.62
NUP88-201ENST00000225696 EDEM2Q9BV94 578 aa11.16□□□□□ -0.62
NUP88-201ENST00000225696 DNTTIP1Q9H147 329 aa11.16□□□□□ -0.62
NUP88-201ENST00000225696 PURGQ9UJV8 347 aaKnown RBP11.16□□□□□ -0.62
NUP88-201ENST00000225696 A0A0D9SG52 128 aa11.15□□□□□ -0.62
NUP88-201ENST00000225696 KANTRA0A1W2PQU2 76 aa11.15□□□□□ -0.62
NUP88-201ENST00000225696 CPED1A4D0V7 1026 aa11.15□□□□□ -0.62
NUP88-201ENST00000225696 ZNF736B4DX44 427 aaPredicted RBP11.15□□□□□ -0.62
NUP88-201ENST00000225696 BCL2L11O43521 198 aa11.15□□□□□ -0.62
NUP88-201ENST00000225696 IFI6P09912 130 aa11.15□□□□□ -0.62
NUP88-201ENST00000225696 PNMTP11086 282 aa11.15□□□□□ -0.62
NUP88-201ENST00000225696 HTR2CP28335 458 aa11.15□□□□□ -0.62
NUP88-201ENST00000225696 DLSTP36957 453 aa11.15□□□□□ -0.62
NUP88-201ENST00000225696 ACTBP60709 375 aa11.15□□□□□ -0.62
NUP88-201ENST00000225696 ACTG1P63261 375 aa11.15□□□□□ -0.62
NUP88-201ENST00000225696 PPP1R1AQ13522 171 aa11.15□□□□□ -0.62
NUP88-201ENST00000225696 OR7A5Q15622 319 aa11.15□□□□□ -0.62
NUP88-201ENST00000225696 CBLN2Q8IUK8 224 aa11.15□□□□□ -0.62
NUP88-201ENST00000225696 FAM219AQ8IW50 185 aa11.15□□□□□ -0.62
NUP88-201ENST00000225696 YAF2Q8IY57 180 aa11.15□□□□□ -0.62
NUP88-201ENST00000225696 CCDC107Q8WV48 283 aa11.15□□□□□ -0.62
NUP88-201ENST00000225696 POTEKPQ9BYX7 375 aa11.15□□□□□ -0.62
NUP88-201ENST00000225696 PRMT8Q9NR22 394 aaPredicted RBP11.15□□□□□ -0.62
NUP88-201ENST00000225696 GPN3Q9UHW5 284 aaPredicted RBP11.15□□□□□ -0.62
NUP88-201ENST00000225696 PRELID3BQ9Y3B1 194 aa11.15□□□□□ -0.62
NUP88-201ENST00000225696 WDR87Q6ZQQ6 2873 aa11.15□□□□□ -0.62
NUP88-201ENST00000225696 CDC14CA4D256 554 aa11.14□□□□□ -0.63
NUP88-201ENST00000225696 OR14I1A6ND48 311 aa11.14□□□□□ -0.63
NUP88-201ENST00000225696 OR6C76A6NM76 312 aa11.14□□□□□ -0.63
NUP88-201ENST00000225696 SULT2B1O00204 365 aa11.14□□□□□ -0.63
NUP88-201ENST00000225696 SLC16A7O60669 478 aa11.14□□□□□ -0.63
NUP88-201ENST00000225696 ATG12O94817 140 aa11.14□□□□□ -0.63
NUP88-201ENST00000225696 CYB5AP00167 134 aa11.14□□□□□ -0.63
NUP88-201ENST00000225696 RENP00797 406 aa11.14□□□□□ -0.63
NUP88-201ENST00000225696 HPGDP15428 266 aa11.14□□□□□ -0.63
NUP88-201ENST00000225696 CTLA4P16410 223 aa11.14□□□□□ -0.63
NUP88-201ENST00000225696 INSM1Q01101 510 aaPredicted RBP11.14□□□□□ -0.63
NUP88-201ENST00000225696 PMPCAQ10713 525 aa11.14□□□□□ -0.63
NUP88-201ENST00000225696 FUT7Q11130 342 aa11.14□□□□□ -0.63
NUP88-201ENST00000225696 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.14□□□□□ -0.63
NUP88-201ENST00000225696 TEX30Q5JUR7 227 aa11.14□□□□□ -0.63
NUP88-201ENST00000225696 MANEAQ5SRI9 462 aa11.14□□□□□ -0.63
NUP88-201ENST00000225696 TMEM240Q5SV17 173 aa11.14□□□□□ -0.63
NUP88-201ENST00000225696 CLVS2Q5SYC1 327 aa11.14□□□□□ -0.63
NUP88-201ENST00000225696 TMPPEQ6ZT21 453 aa11.14□□□□□ -0.63
NUP88-201ENST00000225696 LDLRAD3Q86YD5 345 aa11.14□□□□□ -0.63
NUP88-201ENST00000225696 SLC22A18ASQ8N1D0 253 aa11.14□□□□□ -0.63
NUP88-201ENST00000225696 OR4D6Q8NGJ1 314 aa11.14□□□□□ -0.63
NUP88-201ENST00000225696 RNF128Q8TEB7 428 aa11.14□□□□□ -0.63
NUP88-201ENST00000225696 ZBTB8AQ96BR9 441 aa11.14□□□□□ -0.63
NUP88-201ENST00000225696 C8orf44Q96CB5 159 aa11.14□□□□□ -0.63
NUP88-201ENST00000225696 SLC25A36Q96CQ1 311 aa11.14□□□□□ -0.63
NUP88-201ENST00000225696 NRSN2Q9GZP1 204 aa11.14□□□□□ -0.63
NUP88-201ENST00000225696 NXF5Q9H1B4 397 aaKnown RBP11.14□□□□□ -0.63
NUP88-201ENST00000225696 SLC6A15Q9H2J7 730 aa11.14□□□□□ -0.63
NUP88-201ENST00000225696 PRTFDC1Q9NRG1 225 aa11.14□□□□□ -0.63
NUP88-201ENST00000225696 ASF1BQ9NVP2 202 aa11.14□□□□□ -0.63
NUP88-201ENST00000225696 DHDHQ9UQ10 334 aa11.14□□□□□ -0.63
NUP88-201ENST00000225696 RP1P56715 2156 aa11.14□□□□□ -0.63
NUP88-201ENST00000225696 SIGLEC6O43699 453 aa11.14□□□□□ -0.63
NUP88-201ENST00000225696 ACTL6AO96019 429 aa11.14□□□□□ -0.63
NUP88-201ENST00000225696 RNH1P13489 461 aaKnown RBP11.14□□□□□ -0.63
NUP88-201ENST00000225696 NTSR1P30989 418 aa11.14□□□□□ -0.63
NUP88-201ENST00000225696 CASRP41180 1078 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms