RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 GLYATL3Q5SZD4 288 aa15.54■□□□□ 0.08
USB1-201ENST00000219281 MAMDC2Q7Z304 686 aaPredicted RBP15.54■□□□□ 0.08
USB1-201ENST00000219281 GALNT16Q8N428 558 aa15.54■□□□□ 0.08
USB1-201ENST00000219281 C12orf45Q8N5I9 185 aaPredicted RBP15.54■□□□□ 0.08
USB1-201ENST00000219281 BVESQ8NE79 360 aa15.54■□□□□ 0.08
USB1-201ENST00000219281 ASB5Q8WWX0 329 aa15.54■□□□□ 0.08
USB1-201ENST00000219281 OIT3Q8WWZ8 545 aa15.54■□□□□ 0.08
USB1-201ENST00000219281 ALX4Q9H161 411 aaPredicted RBP15.54■□□□□ 0.08
USB1-201ENST00000219281 C12orf4Q9NQ89 552 aa15.54■□□□□ 0.08
USB1-201ENST00000219281 LANCL2Q9NS86 450 aa15.54■□□□□ 0.08
USB1-201ENST00000219281 UPB1Q9UBR1 384 aa15.54■□□□□ 0.08
USB1-201ENST00000219281 ZNF230Q9UIE0 474 aaPredicted RBP15.54■□□□□ 0.08
USB1-201ENST00000219281 TRAV14DV4A0A0A6YYC5 116 aa15.53■□□□□ 0.08
USB1-201ENST00000219281 IGHV1OR15-9A0A0B4J2B8 117 aa15.53■□□□□ 0.08
USB1-201ENST00000219281 RFPL4AA6NLU0 287 aa15.53■□□□□ 0.08
USB1-201ENST00000219281 RFPL4AL1F8VTS6 287 aa15.53■□□□□ 0.08
USB1-201ENST00000219281 PMS2P2O95744 297 aa15.53■□□□□ 0.08
USB1-201ENST00000219281 RPA2P15927 270 aa15.53■□□□□ 0.08
USB1-201ENST00000219281 MPGP29372 298 aa15.53■□□□□ 0.08
USB1-201ENST00000219281 CAPZBP47756 277 aa15.53■□□□□ 0.08
USB1-201ENST00000219281 EIF2B1Q14232 305 aaKnown RBP15.53■□□□□ 0.08
USB1-201ENST00000219281 NUP210LQ5VU65 1888 aa15.53■□□□□ 0.08
USB1-201ENST00000219281 ZNF454Q8N9F8 522 aa15.53■□□□□ 0.08
USB1-201ENST00000219281 OR5M9Q8NGP3 310 aa15.53■□□□□ 0.08
USB1-201ENST00000219281 OR6K3Q8NGY3 331 aa15.53■□□□□ 0.08
USB1-201ENST00000219281 CCDC107Q8WV48 283 aa15.53■□□□□ 0.08
USB1-201ENST00000219281 ADIPOR1Q96A54 375 aa15.53■□□□□ 0.08
USB1-201ENST00000219281 C8orf44Q96CB5 159 aa15.53■□□□□ 0.08
USB1-201ENST00000219281 ZNF285Q96NJ3 590 aa15.53■□□□□ 0.08
USB1-201ENST00000219281 PTDSS2Q9BVG9 487 aa15.53■□□□□ 0.08
USB1-201ENST00000219281 ZMAT3Q9HA38 289 aaKnown RBP15.53■□□□□ 0.08
USB1-201ENST00000219281 CKLFQ9UBR5 152 aa15.53■□□□□ 0.08
USB1-201ENST00000219281 MRTO4Q9UKD2 239 aaKnown RBP15.53■□□□□ 0.08
USB1-201ENST00000219281 MRPS18BQ9Y676 258 aaKnown RBP15.53■□□□□ 0.08
USB1-201ENST00000219281 CACNA1CQ13936 2221 aa15.53■□□□□ 0.08
USB1-201ENST00000219281 A0A1W2PPC1 479 aa15.52■□□□□ 0.08
USB1-201ENST00000219281 H3BUI4 141 aa15.52■□□□□ 0.08
USB1-201ENST00000219281 SMAD9O15198 467 aaKnown RBP15.52■□□□□ 0.08
USB1-201ENST00000219281 AQP8O94778 261 aa15.52■□□□□ 0.08
USB1-201ENST00000219281 RLN2P04090 185 aa15.52■□□□□ 0.08
USB1-201ENST00000219281 AMY2AP04746 511 aa15.52■□□□□ 0.08
USB1-201ENST00000219281 CTLA4P16410 223 aa15.52■□□□□ 0.08
USB1-201ENST00000219281 IL12BP29460 328 aa15.52■□□□□ 0.08
USB1-201ENST00000219281 OR1D4P47884 311 aa15.52■□□□□ 0.08
USB1-201ENST00000219281 GFERP55789 205 aa15.52■□□□□ 0.08
USB1-201ENST00000219281 SMAD4Q13485 552 aaKnown RBP15.52■□□□□ 0.08
USB1-201ENST00000219281 LY6G6FQ5SQ64 297 aa15.52■□□□□ 0.08
USB1-201ENST00000219281 TMEM229BQ8NBD8 167 aa15.52■□□□□ 0.08
USB1-201ENST00000219281 RELL2Q8NC24 303 aaPredicted RBP15.52■□□□□ 0.08
USB1-201ENST00000219281 ZNF519Q8TB69 540 aa15.52■□□□□ 0.08
USB1-201ENST00000219281 SLC41A2Q96JW4 573 aa15.52■□□□□ 0.08
USB1-201ENST00000219281 TGM7Q96PF1 710 aa15.52■□□□□ 0.08
USB1-201ENST00000219281 GPR160Q9UJ42 338 aa15.52■□□□□ 0.08
USB1-201ENST00000219281 IGLV1-36A0A0B4J1U3 117 aa15.52■□□□□ 0.07
USB1-201ENST00000219281 IGHV5-51A0A0C4DH38 117 aa15.52■□□□□ 0.07
USB1-201ENST00000219281 DCDC2BA2VCK2 349 aa15.52■□□□□ 0.07
USB1-201ENST00000219281 TTLL8A6PVC2 850 aa15.52■□□□□ 0.07
USB1-201ENST00000219281 ALOX12BO75342 701 aa15.52■□□□□ 0.07
USB1-201ENST00000219281 RIDAP52758 137 aaKnown RBP15.52■□□□□ 0.07
USB1-201ENST00000219281 TDGQ13569 410 aa15.52■□□□□ 0.07
USB1-201ENST00000219281 TOMM20Q15388 145 aa15.52■□□□□ 0.07
USB1-201ENST00000219281 SGCBQ16585 318 aa15.52■□□□□ 0.07
USB1-201ENST00000219281 ARSKQ6UWY0 536 aa15.52■□□□□ 0.07
USB1-201ENST00000219281 CATSPERDQ86XM0 798 aa15.52■□□□□ 0.07
USB1-201ENST00000219281 TSTD1Q8NFU3 115 aa15.52■□□□□ 0.07
USB1-201ENST00000219281 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.52■□□□□ 0.07
USB1-201ENST00000219281 SLC25A44Q96H78 314 aaPredicted RBP15.52■□□□□ 0.07
USB1-201ENST00000219281 ABHD6Q9BV23 337 aa15.52■□□□□ 0.07
USB1-201ENST00000219281 POTEKPQ9BYX7 375 aa15.52■□□□□ 0.07
USB1-201ENST00000219281 LRP12Q9Y561 859 aa15.52■□□□□ 0.07
USB1-201ENST00000219281 VCANP13611 3396 aa15.52■□□□□ 0.07
USB1-201ENST00000219281 CACNA1IQ9P0X4 2223 aa15.51■□□□□ 0.07
USB1-201ENST00000219281 TMEM150CB9EJG8 249 aa15.51■□□□□ 0.07
USB1-201ENST00000219281 H0YIG0 161 aa15.51■□□□□ 0.07
USB1-201ENST00000219281 SULT1C2O00338 296 aa15.51■□□□□ 0.07
USB1-201ENST00000219281 SDC3O75056 442 aa15.51■□□□□ 0.07
USB1-201ENST00000219281 MPZL1O95297 269 aa15.51■□□□□ 0.07
USB1-201ENST00000219281 CD2P06729 351 aa15.51■□□□□ 0.07
USB1-201ENST00000219281 ROM1Q03395 351 aa15.51■□□□□ 0.07
USB1-201ENST00000219281 NR0B2Q15466 257 aa15.51■□□□□ 0.07
USB1-201ENST00000219281 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.51■□□□□ 0.07
USB1-201ENST00000219281 OR10K2Q6IF99 312 aa15.51■□□□□ 0.07
USB1-201ENST00000219281 KCTD18Q6PI47 426 aaPredicted RBP15.51■□□□□ 0.07
USB1-201ENST00000219281 HSD17B13Q7Z5P4 300 aaPredicted RBP15.51■□□□□ 0.07
USB1-201ENST00000219281 ZNF546Q86UE3 836 aa15.51■□□□□ 0.07
USB1-201ENST00000219281 STEAP2Q8NFT2 490 aa15.51■□□□□ 0.07
USB1-201ENST00000219281 OR51A2Q8NGJ7 313 aa15.51■□□□□ 0.07
USB1-201ENST00000219281 ZNF721Q8TF20 911 aa15.51■□□□□ 0.07
USB1-201ENST00000219281 PRMT8Q9NR22 394 aaPredicted RBP15.51■□□□□ 0.07
USB1-201ENST00000219281 FBXO4Q9UKT5 387 aa15.51■□□□□ 0.07
USB1-201ENST00000219281 CA14Q9ULX7 337 aa15.51■□□□□ 0.07
USB1-201ENST00000219281 FARSAQ9Y285 508 aaKnown RBP15.51■□□□□ 0.07
USB1-201ENST00000219281 HPP00738 406 aa15.51■□□□□ 0.07
USB1-201ENST00000219281 MELTFP08582 738 aa15.51■□□□□ 0.07
USB1-201ENST00000219281 GP1BBP13224 206 aa15.51■□□□□ 0.07
USB1-201ENST00000219281 IGFBP3P17936 291 aaPredicted RBP15.51■□□□□ 0.07
USB1-201ENST00000219281 NR0B1P51843 470 aaKnown RBP15.51■□□□□ 0.07
USB1-201ENST00000219281 ZP2Q05996 745 aa15.51■□□□□ 0.07
USB1-201ENST00000219281 SPOCK1Q08629 439 aa15.51■□□□□ 0.07
USB1-201ENST00000219281 TTLL10Q6ZVT0 673 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms