RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 ZNF254O75437 659 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 OPRM1P35372 400 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 WNT4P56705 351 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 RAB4BP61018 213 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 GSG1Q2KHT4 349 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 PLA1AQ53H76 456 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 CXorf67Q86X51 503 aaPredicted RBP12.47□□□□□ -0.41
SIX4-201ENST00000216513 ANKRD13BQ86YJ7 626 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 PELI3Q8N2H9 469 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 FAM109AQ8N4B1 249 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 RGCCQ9H4X1 137 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 LPAR2Q9HBW0 351 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 HSPB2A8KAH6 182 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 PNLIPP16233 465 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 GIFP27352 417 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 DIO1P49895 249 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 F2RL1P55085 397 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 HSPB2Q16082 182 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 MEP1BQ16820 701 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 LIMS2Q7Z4I7 341 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 SEMA6DQ8NFY4 1073 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 OR1S1Q8NH92 325 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 BORCS7-ASMTA0A0B4J1R7 106 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 HMGN4O00479 90 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 SELENOFO60613 162 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 SLC2A10O95528 541 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 PEX11BO96011 259 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 HOXB5P09067 269 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 CLEC2LP0C7M8 214 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 GPR176Q14439 515 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 ACKR1Q16570 336 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 CLDN22Q8N7P3 220 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 ZNF441Q8N8Z8 693 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 AKR7LQ8NHP1 331 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 FBXO8Q9NRD0 319 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 HDGFL3Q9Y3E1 203 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 CRMP1Q14194 572 aa12.46□□□□□ -0.41
SIX4-201ENST00000216513 SELENOIQ9C0D9 397 aa12.46□□□□□ -0.41
SIX4-201ENST00000216513 SAXO2Q658L1 398 aa12.46□□□□□ -0.41
SIX4-201ENST00000216513 TSPYL5Q86VY4 417 aaPredicted RBP12.46□□□□□ -0.41
SIX4-201ENST00000216513 ZNF454Q8N9F8 522 aa12.46□□□□□ -0.41
SIX4-201ENST00000216513 KIAA1456Q9P272 454 aa12.46□□□□□ -0.41
SIX4-201ENST00000216513 GLI4P10075 376 aa12.46□□□□□ -0.41
SIX4-201ENST00000216513 FOXK2Q01167 660 aa12.46□□□□□ -0.41
SIX4-201ENST00000216513 TMEM205Q6UW68 189 aa12.46□□□□□ -0.41
SIX4-201ENST00000216513 BHLHA15Q7RTS1 189 aaPredicted RBP12.46□□□□□ -0.41
SIX4-201ENST00000216513 TFAP2CQ92754 450 aa12.46□□□□□ -0.41
SIX4-201ENST00000216513 SORCS2Q96PQ0 1159 aa12.46□□□□□ -0.41
SIX4-201ENST00000216513 RAB1AP62820 205 aa12.46□□□□□ -0.42
SIX4-201ENST00000216513 RTP5Q14D33 572 aa12.46□□□□□ -0.42
SIX4-201ENST00000216513 FGGYQ96C11 551 aa12.46□□□□□ -0.42
SIX4-201ENST00000216513 SLC26A1Q9H2B4 701 aa12.46□□□□□ -0.42
SIX4-201ENST00000216513 A3GALT2U3KPV4 340 aa12.46□□□□□ -0.42
SIX4-201ENST00000216513 TRPM7Q96QT4 1865 aa12.46□□□□□ -0.42
SIX4-201ENST00000216513 CEBPZOSA8MTT3 80 aa12.46□□□□□ -0.42
SIX4-201ENST00000216513 SMAD7O15105 426 aaKnown RBP12.46□□□□□ -0.42
SIX4-201ENST00000216513 VEGFCP49767 419 aa12.46□□□□□ -0.42
SIX4-201ENST00000216513 DUSP8Q13202 625 aa12.46□□□□□ -0.42
SIX4-201ENST00000216513 ZNF321PQ8N8H1 164 aa12.46□□□□□ -0.42
SIX4-201ENST00000216513 CHDHQ8NE62 594 aaPredicted RBP12.46□□□□□ -0.42
SIX4-201ENST00000216513 OR2A5Q96R48 311 aa12.46□□□□□ -0.42
SIX4-201ENST00000216513 SIRPB1O00241 398 aa12.45□□□□□ -0.42
SIX4-201ENST00000216513 OMGP23515 440 aa12.45□□□□□ -0.42
SIX4-201ENST00000216513 ZNF45Q02386 682 aa12.45□□□□□ -0.42
SIX4-201ENST00000216513 C19orf57Q0VDD7 668 aa12.45□□□□□ -0.42
SIX4-201ENST00000216513 LAX1Q8IWV1 398 aa12.45□□□□□ -0.42
SIX4-201ENST00000216513 HAS2Q92819 552 aa12.45□□□□□ -0.42
SIX4-201ENST00000216513 ZNF696Q9H7X3 374 aa12.45□□□□□ -0.42
SIX4-201ENST00000216513 A0A0A6YYD5 115 aa12.45□□□□□ -0.42
SIX4-201ENST00000216513 A0A1B0GTL3 188 aa12.45□□□□□ -0.42
SIX4-201ENST00000216513 UBL3O95164 117 aa12.45□□□□□ -0.42
SIX4-201ENST00000216513 ZFP36L2P47974 494 aaKnown RBP12.45□□□□□ -0.42
SIX4-201ENST00000216513 ZNF92Q03936 586 aa12.45□□□□□ -0.42
SIX4-201ENST00000216513 PRSS45Q7RTY3 260 aa12.45□□□□□ -0.42
SIX4-201ENST00000216513 PRSS48Q7RTY5 328 aa12.45□□□□□ -0.42
SIX4-201ENST00000216513 EGFL6Q8IUX8 553 aa12.45□□□□□ -0.42
SIX4-201ENST00000216513 NKAIN4Q8IVV8 208 aa12.45□□□□□ -0.42
SIX4-201ENST00000216513 LILRB2Q8N423 598 aa12.45□□□□□ -0.42
SIX4-201ENST00000216513 ORAI1Q96D31 301 aa12.45□□□□□ -0.42
SIX4-201ENST00000216513 CNRIP1Q96F85 164 aaPredicted RBP12.45□□□□□ -0.42
SIX4-201ENST00000216513 FBXO34Q9NWN3 711 aa12.45□□□□□ -0.42
SIX4-201ENST00000216513 PET100P0DJ07 73 aa12.45□□□□□ -0.42
SIX4-201ENST00000216513 THEM4Q5T1C6 240 aa12.45□□□□□ -0.42
SIX4-201ENST00000216513 CAMKMTQ7Z624 323 aa12.45□□□□□ -0.42
SIX4-201ENST00000216513 ZNF683Q8IZ20 524 aa12.45□□□□□ -0.42
SIX4-201ENST00000216513 OR5M11Q96RB7 305 aa12.45□□□□□ -0.42
SIX4-201ENST00000216513 OCSTAMPQ9BR26 566 aa12.45□□□□□ -0.42
SIX4-201ENST00000216513 SLCO5A1Q9H2Y9 848 aa12.45□□□□□ -0.42
SIX4-201ENST00000216513 UBQLN2Q9UHD9 624 aa12.45□□□□□ -0.42
SIX4-201ENST00000216513 SCN1AP35498 2009 aa12.45□□□□□ -0.42
SIX4-201ENST00000216513 PRR35P0CG20 571 aa12.45□□□□□ -0.42
SIX4-201ENST00000216513 BMP2P12643 396 aa12.45□□□□□ -0.42
SIX4-201ENST00000216513 ZNF14P17017 642 aaPredicted RBP12.45□□□□□ -0.42
SIX4-201ENST00000216513 TNFRSF1AP19438 455 aa12.45□□□□□ -0.42
SIX4-201ENST00000216513 MPEG1Q2M385 716 aa12.45□□□□□ -0.42
SIX4-201ENST00000216513 PLEKHN1Q494U1 663 aaPredicted RBP12.45□□□□□ -0.42
SIX4-201ENST00000216513 KCTD20Q7Z5Y7 419 aa12.45□□□□□ -0.42
SIX4-201ENST00000216513 TRUB1Q8WWH5 349 aaKnown RBP12.45□□□□□ -0.42
SIX4-201ENST00000216513 SSX3Q99909 188 aa12.45□□□□□ -0.42
SIX4-201ENST00000216513 TMEM100Q9NV29 134 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms