RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 A0A1W2PR64 198 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 A0A1W2PRV1 198 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 F6UZH7 168 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 GJB3O75712 270 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 FURINP09958 794 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 ATXN1LP0C7T5 689 aaKnown RBP9.59□□□□□ -0.87
VCL-201ENST00000211998 USF1P22415 310 aaPredicted RBP9.59□□□□□ -0.87
VCL-201ENST00000211998 ECI1P42126 302 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 TPBGQ13641 420 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 NCR3LG1Q68D85 454 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 PARS2Q7L3T8 475 aaKnown RBP9.59□□□□□ -0.87
VCL-201ENST00000211998 ZNF429Q86V71 674 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 OR9A4Q8NGU2 314 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 OR4F5Q8NH21 305 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 PPP1R35Q8TAP8 253 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 TMEM37Q8WXS4 190 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 DYRK2Q92630 601 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 GNPNAT1Q96EK6 184 aaPredicted RBP9.59□□□□□ -0.87
VCL-201ENST00000211998 CMTM3Q96MX0 182 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 OR4F4Q96R69 305 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 METTL9Q9H1A3 318 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 OR10A2Q9H208 303 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 B3GALT5Q9Y2C3 310 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 KDM3BQ7LBC6 1761 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 TRAV34A0A0B4J273 112 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 ZNF816-ZNF321PA0A0X1KG74 233 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 FOXE1O00358 373 aaPredicted RBP9.59□□□□□ -0.87
VCL-201ENST00000211998 PKIAP61925 76 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 ZNF765Q7L2R6 523 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 FAM160A2Q8N612 972 aaPredicted RBP9.59□□□□□ -0.87
VCL-201ENST00000211998 ZNF321PQ8N8H1 164 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 NAT6Q93015 286 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 CLCF1Q9UBD9 225 aa9.59□□□□□ -0.87
VCL-201ENST00000211998 XKRY2A2RUG3 117 aa9.59□□□□□ -0.88
VCL-201ENST00000211998 FXYD1O00168 92 aa9.59□□□□□ -0.88
VCL-201ENST00000211998 RPLP1P05386 114 aaKnown RBP9.59□□□□□ -0.88
VCL-201ENST00000211998 FCGR2AP12318 317 aa9.59□□□□□ -0.88
VCL-201ENST00000211998 TMEM183BQ1AE95 376 aa9.59□□□□□ -0.88
VCL-201ENST00000211998 HSF5Q4G112 596 aaPredicted RBP9.59□□□□□ -0.88
VCL-201ENST00000211998 C5orf46Q6UWT4 87 aa9.59□□□□□ -0.88
VCL-201ENST00000211998 TRILQ7L0X0 811 aa9.59□□□□□ -0.88
VCL-201ENST00000211998 LYG2Q86SG7 212 aa9.59□□□□□ -0.88
VCL-201ENST00000211998 ZNF511Q8NB15 262 aa9.59□□□□□ -0.88
VCL-201ENST00000211998 OR52E1Q8NGJ3 308 aa9.59□□□□□ -0.88
VCL-201ENST00000211998 OR5D18Q8NGL1 313 aa9.59□□□□□ -0.88
VCL-201ENST00000211998 EDEM2Q9BV94 578 aa9.59□□□□□ -0.88
VCL-201ENST00000211998 OR10A5Q9H207 317 aa9.59□□□□□ -0.88
VCL-201ENST00000211998 MOB1AQ9H8S9 216 aa9.59□□□□□ -0.88
VCL-201ENST00000211998 OR52A1Q9UKL2 312 aa9.59□□□□□ -0.88
VCL-201ENST00000211998 PPT2Q9UMR5 302 aa9.59□□□□□ -0.88
VCL-201ENST00000211998 TRAF3IP2O43734 574 aaPredicted RBP9.58□□□□□ -0.88
VCL-201ENST00000211998 DUSP1P28562 367 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 TM4SF4P48230 202 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 PRLHRP49683 370 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 DVL1P1P54792 670 aaPredicted RBP9.58□□□□□ -0.88
VCL-201ENST00000211998 HIST1H3AP68431 136 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 MZT1Q08AG7 82 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 PMS2P11Q13670 270 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 LBHQ53QV2 105 aaPredicted RBP9.58□□□□□ -0.88
VCL-201ENST00000211998 PLAC9Q5JTB6 97 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 TMEM65Q6PI78 240 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 TMEM207Q6UWW9 146 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 WDR5BQ86VZ2 330 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 ZNF761Q86XN6 746 aaPredicted RBP9.58□□□□□ -0.88
VCL-201ENST00000211998 PRSS35Q8N3Z0 413 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 FAM71CQ8NEG0 241 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 OR4C16Q8NGL9 310 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 RHBDD1Q8TEB9 315 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 DPF1Q92782 380 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 MSI2Q96DH6 328 aaKnown RBP9.58□□□□□ -0.88
VCL-201ENST00000211998 SMAD6O43541 496 aaKnown RBP9.58□□□□□ -0.88
VCL-201ENST00000211998 TIMP2P16035 220 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 SDHBP21912 280 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 P2RX1P51575 399 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 MRPS21P82921 87 aaKnown RBP9.58□□□□□ -0.88
VCL-201ENST00000211998 GSG1Q2KHT4 349 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 SLC25A35Q3KQZ1 300 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 ZNF362Q5T0B9 420 aaPredicted RBP9.58□□□□□ -0.88
VCL-201ENST00000211998 MRPL43Q8N983 215 aaKnown RBP9.58□□□□□ -0.88
VCL-201ENST00000211998 IKZF5Q9H5V7 419 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 PLEKHA2Q9HB19 425 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 PRSS16Q9NQE7 514 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 CYSLTR2Q9NS75 346 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 NXT1Q9UKK6 140 aaKnown RBP9.58□□□□□ -0.88
VCL-201ENST00000211998 MCTS1Q9ULC4 181 aaKnown RBP9.58□□□□□ -0.88
VCL-201ENST00000211998 USP3Q9Y6I4 520 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 TMEM218A2RU14 115 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 P2RY10O00398 339 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 TCF21O43680 179 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 CER1O95813 267 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 APLNRP35414 380 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 NKX2-1P43699 371 aaPredicted RBP9.58□□□□□ -0.88
VCL-201ENST00000211998 CXCL12P48061 93 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 MIDNQ504T8 468 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 FAM57BQ71RH2 274 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 C22orf15Q8WYQ4 148 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 EXTL1Q92935 676 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 ELOVL1Q9BW60 279 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 TNFRSF12AQ9NP84 129 aa9.58□□□□□ -0.88
VCL-201ENST00000211998 SLC23A2Q9UGH3 650 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms