RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 ZFPL1O95159 310 aa10.9□□□□□ -0.66
CHPF2-201ENST00000035307 HLA-AP01891 365 aaKnown RBP10.9□□□□□ -0.66
CHPF2-201ENST00000035307 HOXB5P09067 269 aa10.9□□□□□ -0.66
CHPF2-201ENST00000035307 ENDOUP21128 410 aaKnown RBP10.9□□□□□ -0.66
CHPF2-201ENST00000035307 PUDPQ08623 228 aa10.9□□□□□ -0.66
CHPF2-201ENST00000035307 BCL2A1Q16548 175 aa10.9□□□□□ -0.66
CHPF2-201ENST00000035307 METTL11BQ5VVY1 283 aa10.9□□□□□ -0.66
CHPF2-201ENST00000035307 ZNF574Q6ZN55 896 aaPredicted RBP10.9□□□□□ -0.66
CHPF2-201ENST00000035307 SCARF2Q96GP6 870 aaPredicted RBP10.9□□□□□ -0.66
CHPF2-201ENST00000035307 SMIM3Q9BZL3 60 aa10.9□□□□□ -0.66
CHPF2-201ENST00000035307 ACTR6Q9GZN1 396 aa10.9□□□□□ -0.66
CHPF2-201ENST00000035307 ERVMER34-1Q9H9K5 563 aa10.9□□□□□ -0.66
CHPF2-201ENST00000035307 KIAA1671Q9BY89 1806 aa10.9□□□□□ -0.66
CHPF2-201ENST00000035307 PLXND1Q9Y4D7 1925 aa10.9□□□□□ -0.66
CHPF2-201ENST00000035307 A0A0A6YYJ9 748 aa10.9□□□□□ -0.66
CHPF2-201ENST00000035307 ARRDC5A6NEK1 342 aa10.9□□□□□ -0.66
CHPF2-201ENST00000035307 ZNHIT1O43257 154 aa10.9□□□□□ -0.66
CHPF2-201ENST00000035307 ZNF35P13682 527 aa10.9□□□□□ -0.66
CHPF2-201ENST00000035307 EDN3P14138 238 aa10.9□□□□□ -0.66
CHPF2-201ENST00000035307 CDKN2AP42771 156 aaKnown RBP10.9□□□□□ -0.66
CHPF2-201ENST00000035307 RHOUQ7L0Q8 258 aa10.9□□□□□ -0.66
CHPF2-201ENST00000035307 TMPRSS7Q7RTY8 843 aa10.9□□□□□ -0.66
CHPF2-201ENST00000035307 CLEC1AQ8NC01 280 aa10.9□□□□□ -0.66
CHPF2-201ENST00000035307 ZPLD1Q8TCW7 415 aa10.9□□□□□ -0.66
CHPF2-201ENST00000035307 ELP5Q8TE02 316 aa10.9□□□□□ -0.66
CHPF2-201ENST00000035307 PTPMT1Q8WUK0 201 aaPredicted RBP10.9□□□□□ -0.66
CHPF2-201ENST00000035307 C15orf40Q8WUR7 153 aa10.9□□□□□ -0.66
CHPF2-201ENST00000035307 PIGTQ969N2 578 aa10.9□□□□□ -0.66
CHPF2-201ENST00000035307 FAM3DQ96BQ1 224 aa10.9□□□□□ -0.66
CHPF2-201ENST00000035307 C3orf49Q96BT1 292 aa10.9□□□□□ -0.66
CHPF2-201ENST00000035307 DHRS1Q96LJ7 313 aa10.9□□□□□ -0.66
CHPF2-201ENST00000035307 ABHD1Q96SE0 405 aa10.9□□□□□ -0.66
CHPF2-201ENST00000035307 MFRPQ9BY79 579 aa10.9□□□□□ -0.66
CHPF2-201ENST00000035307 DNAJB12Q9NXW2 375 aaKnown RBP10.9□□□□□ -0.66
CHPF2-201ENST00000035307 ASH2LQ9UBL3 628 aa10.9□□□□□ -0.66
CHPF2-201ENST00000035307 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.9□□□□□ -0.67
CHPF2-201ENST00000035307 A0A0B4J2E0 115 aa10.9□□□□□ -0.67
CHPF2-201ENST00000035307 A0A1B0GX12 115 aa10.9□□□□□ -0.67
CHPF2-201ENST00000035307 SP9P0CG40 484 aa10.9□□□□□ -0.67
CHPF2-201ENST00000035307 DPP4P27487 766 aa10.9□□□□□ -0.67
CHPF2-201ENST00000035307 PPICP45877 212 aa10.9□□□□□ -0.67
CHPF2-201ENST00000035307 POLR2HP52434 150 aaKnown RBP10.9□□□□□ -0.67
CHPF2-201ENST00000035307 FZD5Q13467 585 aa10.9□□□□□ -0.67
CHPF2-201ENST00000035307 TNK1Q13470 666 aa10.9□□□□□ -0.67
CHPF2-201ENST00000035307 ASAH1Q13510 395 aa10.9□□□□□ -0.67
CHPF2-201ENST00000035307 ATP1A1-AS1Q5TC04 95 aa10.9□□□□□ -0.67
CHPF2-201ENST00000035307 RABEPKQ7Z6M1 372 aa10.9□□□□□ -0.67
CHPF2-201ENST00000035307 GPR137CQ8N3F9 429 aa10.9□□□□□ -0.67
CHPF2-201ENST00000035307 ZNF611Q8N823 705 aa10.9□□□□□ -0.67
CHPF2-201ENST00000035307 ZNF501Q96CX3 271 aaPredicted RBP10.9□□□□□ -0.67
CHPF2-201ENST00000035307 SMIM19Q96E16 107 aa10.9□□□□□ -0.67
CHPF2-201ENST00000035307 GIMAP5Q96F15 307 aa10.9□□□□□ -0.67
CHPF2-201ENST00000035307 TWSG1Q9GZX9 223 aa10.9□□□□□ -0.67
CHPF2-201ENST00000035307 RNF32Q9H0A6 362 aa10.9□□□□□ -0.67
CHPF2-201ENST00000035307 MIXL1Q9H2W2 232 aa10.9□□□□□ -0.67
CHPF2-201ENST00000035307 MCCC2Q9HCC0 563 aa10.9□□□□□ -0.67
CHPF2-201ENST00000035307 MMACHCQ9Y4U1 282 aa10.9□□□□□ -0.67
CHPF2-201ENST00000035307 NPIPB8E9PQR5 432 aa10.89□□□□□ -0.67
CHPF2-201ENST00000035307 TBXA2RP21731 343 aa10.89□□□□□ -0.67
CHPF2-201ENST00000035307 CDAP32320 146 aa10.89□□□□□ -0.67
CHPF2-201ENST00000035307 CSNK1A1P48729 337 aa10.89□□□□□ -0.67
CHPF2-201ENST00000035307 ZNF84P51523 738 aa10.89□□□□□ -0.67
CHPF2-201ENST00000035307 ACTBP60709 375 aa10.89□□□□□ -0.67
CHPF2-201ENST00000035307 ACTG1P63261 375 aa10.89□□□□□ -0.67
CHPF2-201ENST00000035307 CDK10Q15131 360 aa10.89□□□□□ -0.67
CHPF2-201ENST00000035307 ARSKQ6UWY0 536 aa10.89□□□□□ -0.67
CHPF2-201ENST00000035307 COPZ2Q9P299 210 aa10.89□□□□□ -0.67
CHPF2-201ENST00000035307 A0A1W2PPC1 479 aa10.89□□□□□ -0.67
CHPF2-201ENST00000035307 ZNF705EA8MWA4 302 aaPredicted RBP10.89□□□□□ -0.67
CHPF2-201ENST00000035307 SCO1O75880 301 aa10.89□□□□□ -0.67
CHPF2-201ENST00000035307 DBHP09172 617 aa10.89□□□□□ -0.67
CHPF2-201ENST00000035307 HTR2CP28335 458 aa10.89□□□□□ -0.67
CHPF2-201ENST00000035307 RBMXP38159 391 aaKnown RBP10.89□□□□□ -0.67
CHPF2-201ENST00000035307 RAD52P43351 418 aa10.89□□□□□ -0.67
CHPF2-201ENST00000035307 PER3P56645 1201 aa10.89□□□□□ -0.67
CHPF2-201ENST00000035307 IL13RA1P78552 427 aa10.89□□□□□ -0.67
CHPF2-201ENST00000035307 UBE2NLQ5JXB2 153 aa10.89□□□□□ -0.67
CHPF2-201ENST00000035307 C6orf15Q6UXA7 325 aaPredicted RBP10.89□□□□□ -0.67
CHPF2-201ENST00000035307 BAIAP2L2Q6UXY1 529 aa10.89□□□□□ -0.67
CHPF2-201ENST00000035307 C17orf107Q6ZR85 190 aa10.89□□□□□ -0.67
CHPF2-201ENST00000035307 P4HA3Q7Z4N8 544 aa10.89□□□□□ -0.67
CHPF2-201ENST00000035307 ZNF845Q96IR2 970 aaPredicted RBP10.89□□□□□ -0.67
CHPF2-201ENST00000035307 URM1Q9BTM9 101 aaKnown RBP10.89□□□□□ -0.67
CHPF2-201ENST00000035307 ZNF700Q9H0M5 742 aa10.89□□□□□ -0.67
CHPF2-201ENST00000035307 C20orf85Q9H1P6 137 aa10.89□□□□□ -0.67
CHPF2-201ENST00000035307 A0A087WV62 115 aa10.89□□□□□ -0.67
CHPF2-201ENST00000035307 A8MVM7 634 aa10.89□□□□□ -0.67
CHPF2-201ENST00000035307 TNFRSF10AO00220 468 aa10.89□□□□□ -0.67
CHPF2-201ENST00000035307 CT45A8P0DMV1 189 aa10.89□□□□□ -0.67
CHPF2-201ENST00000035307 CT45A9P0DMV2 189 aa10.89□□□□□ -0.67
CHPF2-201ENST00000035307 EPXP11678 715 aa10.89□□□□□ -0.67
CHPF2-201ENST00000035307 DAP3P51398 398 aaKnown RBP10.89□□□□□ -0.67
CHPF2-201ENST00000035307 C21orf58P58505 322 aa10.89□□□□□ -0.67
CHPF2-201ENST00000035307 CT45A2Q5DJT8 189 aa10.89□□□□□ -0.67
CHPF2-201ENST00000035307 HOXB13Q92826 284 aaPredicted RBP10.89□□□□□ -0.67
CHPF2-201ENST00000035307 TAAR8Q969N4 342 aa10.89□□□□□ -0.67
CHPF2-201ENST00000035307 MIB2Q96AX9 1013 aa10.89□□□□□ -0.67
CHPF2-201ENST00000035307 TM4SF19Q96DZ7 209 aa10.89□□□□□ -0.67
CHPF2-201ENST00000035307 ULBP2Q9BZM5 246 aa10.89□□□□□ -0.67
CHPF2-201ENST00000035307 KCNE5Q9UJ90 142 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms