RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 UPK3AO75631 287 aa10.4□□□□□ -0.74
CLN6-223ENST00000637823 SULT1C4O75897 302 aa10.4□□□□□ -0.74
CLN6-223ENST00000637823 HOXD4P09016 255 aaPredicted RBP10.4□□□□□ -0.74
CLN6-223ENST00000637823 SPARCP09486 303 aa10.4□□□□□ -0.74
CLN6-223ENST00000637823 GABRA1P14867 456 aa10.4□□□□□ -0.74
CLN6-223ENST00000637823 PTGER4P35408 488 aa10.4□□□□□ -0.74
CLN6-223ENST00000637823 TGFBR2P37173 567 aa10.4□□□□□ -0.74
CLN6-223ENST00000637823 GBX2P52951 348 aaPredicted RBP10.4□□□□□ -0.74
CLN6-223ENST00000637823 OR12D2P58182 307 aa10.4□□□□□ -0.74
CLN6-223ENST00000637823 LSM6P62312 80 aaKnown RBP10.4□□□□□ -0.74
CLN6-223ENST00000637823 EGR3Q06889 387 aa10.4□□□□□ -0.74
CLN6-223ENST00000637823 KLRB1Q12918 225 aa10.4□□□□□ -0.74
CLN6-223ENST00000637823 GPR50Q13585 617 aa10.4□□□□□ -0.74
CLN6-223ENST00000637823 DOC2BQ14184 412 aa10.4□□□□□ -0.74
CLN6-223ENST00000637823 MEP1BQ16820 701 aa10.4□□□□□ -0.74
CLN6-223ENST00000637823 ZNF684Q5T5D7 378 aa10.4□□□□□ -0.74
CLN6-223ENST00000637823 SLC18B1Q6NT16 456 aa10.4□□□□□ -0.74
CLN6-223ENST00000637823 KCTD18Q6PI47 426 aaPredicted RBP10.4□□□□□ -0.74
CLN6-223ENST00000637823 C19orf48Q6RUI8 117 aa10.4□□□□□ -0.74
CLN6-223ENST00000637823 VASH1Q7L8A9 365 aaPredicted RBP10.4□□□□□ -0.74
CLN6-223ENST00000637823 KLBQ86Z14 1044 aa10.4□□□□□ -0.74
CLN6-223ENST00000637823 HAVCR2Q8TDQ0 301 aa10.4□□□□□ -0.74
CLN6-223ENST00000637823 C4orf36Q96KX1 117 aa10.4□□□□□ -0.74
CLN6-223ENST00000637823 BCL7BQ9BQE9 202 aa10.4□□□□□ -0.74
CLN6-223ENST00000637823 TTYH2Q9BSA4 534 aa10.4□□□□□ -0.74
CLN6-223ENST00000637823 GPR35Q9HC97 309 aa10.4□□□□□ -0.74
CLN6-223ENST00000637823 POLE4Q9NR33 117 aa10.4□□□□□ -0.74
CLN6-223ENST00000637823 RSL24D1Q9UHA3 163 aaKnown RBP10.4□□□□□ -0.74
CLN6-223ENST00000637823 KLHDC2Q9Y2U9 406 aa10.4□□□□□ -0.74
CLN6-223ENST00000637823 ATMQ13315 3056 aa10.39□□□□□ -0.75
CLN6-223ENST00000637823 CD8B2A6NJW9 211 aa10.39□□□□□ -0.75
CLN6-223ENST00000637823 RPL36A-HNRNPH2H7BZ11 118 aa10.39□□□□□ -0.75
CLN6-223ENST00000637823 ZNHIT1O43257 154 aa10.39□□□□□ -0.75
CLN6-223ENST00000637823 NOL3O60936 208 aaKnown RBP10.39□□□□□ -0.75
CLN6-223ENST00000637823 WDR1O75083 606 aa10.39□□□□□ -0.75
CLN6-223ENST00000637823 SS18L1O75177 396 aaPredicted RBP10.39□□□□□ -0.75
CLN6-223ENST00000637823 KRT33AO76009 404 aa10.39□□□□□ -0.75
CLN6-223ENST00000637823 KRT8P05787 483 aa10.39□□□□□ -0.75
CLN6-223ENST00000637823 NPR2P20594 1047 aa10.39□□□□□ -0.75
CLN6-223ENST00000637823 MSR1P21757 451 aa10.39□□□□□ -0.75
CLN6-223ENST00000637823 AGTR1P30556 359 aa10.39□□□□□ -0.75
CLN6-223ENST00000637823 CDAP32320 146 aa10.39□□□□□ -0.75
CLN6-223ENST00000637823 GTF2A1P52655 376 aaPredicted RBP10.39□□□□□ -0.75
CLN6-223ENST00000637823 TAS2R43P59537 309 aa10.39□□□□□ -0.75
CLN6-223ENST00000637823 MRPS34P82930 218 aaKnown RBP10.39□□□□□ -0.75
CLN6-223ENST00000637823 MRPL28Q13084 256 aaKnown RBP10.39□□□□□ -0.75
CLN6-223ENST00000637823 EIF2B1Q14232 305 aaKnown RBP10.39□□□□□ -0.75
CLN6-223ENST00000637823 SGCAQ16586 387 aa10.39□□□□□ -0.75
CLN6-223ENST00000637823 ACSF3Q4G176 576 aaPredicted RBP10.39□□□□□ -0.75
CLN6-223ENST00000637823 TP53I3Q53FA7 332 aa10.39□□□□□ -0.75
CLN6-223ENST00000637823 NSUN5P2Q63ZY6 315 aa10.39□□□□□ -0.75
CLN6-223ENST00000637823 OR2A2Q6IF42 318 aa10.39□□□□□ -0.75
CLN6-223ENST00000637823 ZNF585AQ6P3V2 769 aa10.39□□□□□ -0.75
CLN6-223ENST00000637823 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.39□□□□□ -0.75
CLN6-223ENST00000637823 P2RY8Q86VZ1 359 aa10.39□□□□□ -0.75
CLN6-223ENST00000637823 PHC2Q8IXK0 858 aa10.39□□□□□ -0.75
CLN6-223ENST00000637823 ZNF100Q8IYN0 542 aa10.39□□□□□ -0.75
CLN6-223ENST00000637823 RFLNBQ8N5W9 214 aa10.39□□□□□ -0.75
CLN6-223ENST00000637823 FAM57AQ8TBR7 257 aa10.39□□□□□ -0.75
CLN6-223ENST00000637823 RAB2BQ8WUD1 216 aa10.39□□□□□ -0.75
CLN6-223ENST00000637823 UFD1Q92890 307 aa10.39□□□□□ -0.75
CLN6-223ENST00000637823 APH1AQ96BI3 265 aa10.39□□□□□ -0.75
CLN6-223ENST00000637823 ISOC1Q96CN7 298 aa10.39□□□□□ -0.75
CLN6-223ENST00000637823 PELI1Q96FA3 418 aa10.39□□□□□ -0.75
CLN6-223ENST00000637823 DOK1Q99704 481 aa10.39□□□□□ -0.75
CLN6-223ENST00000637823 TM9SF2Q99805 663 aa10.39□□□□□ -0.75
CLN6-223ENST00000637823 ABHD6Q9BV23 337 aa10.39□□□□□ -0.75
CLN6-223ENST00000637823 SLC25A18Q9H1K4 315 aa10.39□□□□□ -0.75
CLN6-223ENST00000637823 NELFAQ9H3P2 528 aa10.39□□□□□ -0.75
CLN6-223ENST00000637823 CRLF2Q9HC73 371 aa10.39□□□□□ -0.75
CLN6-223ENST00000637823 TRIM36Q9NQ86 728 aa10.39□□□□□ -0.75
CLN6-223ENST00000637823 CYB5R1Q9UHQ9 305 aa10.39□□□□□ -0.75
CLN6-223ENST00000637823 ENPP5Q9UJA9 477 aa10.39□□□□□ -0.75
CLN6-223ENST00000637823 GNG8Q9UK08 70 aa10.39□□□□□ -0.75
CLN6-223ENST00000637823 ZMIZ1Q9ULJ6 1067 aa10.39□□□□□ -0.75
CLN6-223ENST00000637823 CLEC4AQ9UMR7 237 aa10.39□□□□□ -0.75
CLN6-223ENST00000637823 DSPP15924 2871 aaKnown RBP10.38□□□□□ -0.75
CLN6-223ENST00000637823 HSPB2A8KAH6 182 aa10.38□□□□□ -0.75
CLN6-223ENST00000637823 OGG1O15527 345 aa10.38□□□□□ -0.75
CLN6-223ENST00000637823 LALBAP00709 142 aa10.38□□□□□ -0.75
CLN6-223ENST00000637823 PSKH1P11801 424 aa10.38□□□□□ -0.75
CLN6-223ENST00000637823 CD53P19397 219 aa10.38□□□□□ -0.75
CLN6-223ENST00000637823 RPS27P42677 84 aaKnown RBP10.38□□□□□ -0.75
CLN6-223ENST00000637823 TDGF1P3P51864 188 aa10.38□□□□□ -0.75
CLN6-223ENST00000637823 SIRPAP78324 504 aa10.38□□□□□ -0.75
CLN6-223ENST00000637823 ROR2Q01974 943 aaKnown RBP10.38□□□□□ -0.75
CLN6-223ENST00000637823 ROM1Q03395 351 aa10.38□□□□□ -0.75
CLN6-223ENST00000637823 HSPB2Q16082 182 aa10.38□□□□□ -0.75
CLN6-223ENST00000637823 SSX1Q16384 188 aa10.38□□□□□ -0.75
CLN6-223ENST00000637823 TIMM50Q3ZCQ8 353 aa10.38□□□□□ -0.75
CLN6-223ENST00000637823 CCDC58Q4VC31 144 aa10.38□□□□□ -0.75
CLN6-223ENST00000637823 TSPO2Q5TGU0 170 aa10.38□□□□□ -0.75
CLN6-223ENST00000637823 FAM27BQ5VT28 67 aa10.38□□□□□ -0.75
CLN6-223ENST00000637823 LIPKQ5VXJ0 399 aa10.38□□□□□ -0.75
CLN6-223ENST00000637823 DEGS2Q6QHC5 323 aa10.38□□□□□ -0.75
CLN6-223ENST00000637823 SLC16A12Q6ZSM3 486 aa10.38□□□□□ -0.75
CLN6-223ENST00000637823 LINGO2Q7L985 606 aa10.38□□□□□ -0.75
CLN6-223ENST00000637823 NUFIP2Q7Z417 695 aaKnown RBP10.38□□□□□ -0.75
CLN6-223ENST00000637823 FAM220AQ7Z4H9 259 aa10.38□□□□□ -0.75
CLN6-223ENST00000637823 ABHD12BQ7Z5M8 362 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms