RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 SEH1LQ96EE3 360 aa13.11□□□□□ -0.31
CLN6-215ENST00000636674 SLC25A32Q9H2D1 315 aa13.11□□□□□ -0.31
CLN6-215ENST00000636674 LDAHQ9H6V9 325 aa13.11□□□□□ -0.31
CLN6-215ENST00000636674 TMEM138Q9NPI0 162 aa13.11□□□□□ -0.31
CLN6-215ENST00000636674 TRAV14DV4A0A0A6YYC5 116 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 IGLV1-36A0A0B4J1U3 117 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 TMEM82A0PJX8 343 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 PRSS37A4D1T9 235 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 A8MUA0 341 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 GPANK1O95872 356 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 HPP00738 406 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 IGHMP01871 453 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 UBBP0CG47 229 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 UBCP0CG48 685 aaKnown RBP13.1□□□□□ -0.31
CLN6-215ENST00000636674 AGTR1P30556 359 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 RPS27AP62979 156 aaKnown RBP13.1□□□□□ -0.31
CLN6-215ENST00000636674 UBA52P62987 128 aaKnown RBP13.1□□□□□ -0.31
CLN6-215ENST00000636674 ZNF117Q03924 483 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 C4orf46Q504U0 113 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.1□□□□□ -0.31
CLN6-215ENST00000636674 LPCAT3Q6P1A2 487 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 C8orf44Q96CB5 159 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 MMABQ96EY8 250 aaPredicted RBP13.1□□□□□ -0.31
CLN6-215ENST00000636674 KLHDC3Q9BQ90 382 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 EDEM2Q9BV94 578 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 MFFQ9GZY8 342 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 POFUT1Q9H488 388 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 PRMT8Q9NR22 394 aaPredicted RBP13.1□□□□□ -0.31
CLN6-215ENST00000636674 DHDHQ9UQ10 334 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 MMACHCQ9Y4U1 282 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 TMEM184BQ9Y519 407 aaPredicted RBP13.1□□□□□ -0.31
CLN6-215ENST00000636674 A0A1B0GTI1 187 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 A0A1W2PQD3 144 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 LDLRAD4O15165 306 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 PNPP00491 289 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 CD74P04233 296 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 CD2P06729 351 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 OR4E1P0C645 316 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 MGMTP16455 207 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 GABRG2P18507 467 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 RORAP35398 523 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 CAPZBP47756 277 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 CCR5P51681 352 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 RPL27P61353 136 aaKnown RBP13.1□□□□□ -0.31
CLN6-215ENST00000636674 SORDQ00796 357 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 ODF4Q2M2E3 257 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 CLVS2Q5SYC1 327 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 ARHGAP40Q5TG30 622 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 KCTD18Q6PI47 426 aaPredicted RBP13.1□□□□□ -0.31
CLN6-215ENST00000636674 C11orf88Q6PI97 169 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 TMEM205Q6UW68 189 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 MAMDC2Q7Z304 686 aaPredicted RBP13.1□□□□□ -0.31
CLN6-215ENST00000636674 CATSPERDQ86XM0 798 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 C12orf45Q8N5I9 185 aaPredicted RBP13.1□□□□□ -0.31
CLN6-215ENST00000636674 ASB5Q8WWX0 329 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 METTL21AQ8WXB1 218 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 SLC41A2Q96JW4 573 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 ELF4Q99607 663 aaPredicted RBP13.1□□□□□ -0.31
CLN6-215ENST00000636674 MAP3K3Q99759 626 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 PTDSS2Q9BVG9 487 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 CHST6Q9GZX3 395 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 ATG5Q9H1Y0 275 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 KCNK15Q9H427 330 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 LANCL2Q9NS86 450 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 MRPL22Q9NWU5 206 aaKnown RBP13.1□□□□□ -0.31
CLN6-215ENST00000636674 CKLFQ9UBR5 152 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 PLCL2Q9UPR0 1127 aa13.1□□□□□ -0.31
CLN6-215ENST00000636674 A0A1B0GW55 424 aa13.09□□□□□ -0.31
CLN6-215ENST00000636674 FITM1A5D6W6 292 aa13.09□□□□□ -0.31
CLN6-215ENST00000636674 POM121CA8CG34 1229 aa13.09□□□□□ -0.31
CLN6-215ENST00000636674 CHURC1-FNTBB4DL54 471 aa13.09□□□□□ -0.31
CLN6-215ENST00000636674 D6RAR5 112 aa13.09□□□□□ -0.31
CLN6-215ENST00000636674 EIF4E2O60573 245 aaKnown RBP13.09□□□□□ -0.31
CLN6-215ENST00000636674 SDC3O75056 442 aa13.09□□□□□ -0.31
CLN6-215ENST00000636674 RAB3DO95716 219 aa13.09□□□□□ -0.31
CLN6-215ENST00000636674 IGKV3-11P04433 115 aa13.09□□□□□ -0.31
CLN6-215ENST00000636674 DUX4L2P0CJ85 424 aa13.09□□□□□ -0.31
CLN6-215ENST00000636674 DUX4L3P0CJ86 424 aa13.09□□□□□ -0.31
CLN6-215ENST00000636674 DUX4L4P0CJ87 422 aa13.09□□□□□ -0.31
CLN6-215ENST00000636674 DUX4L5P0CJ88 424 aa13.09□□□□□ -0.31
CLN6-215ENST00000636674 DUX4L6P0CJ89 424 aa13.09□□□□□ -0.31
CLN6-215ENST00000636674 DUX4L7P0CJ90 424 aa13.09□□□□□ -0.31
CLN6-215ENST00000636674 CTSEP14091 401 aa13.09□□□□□ -0.31
CLN6-215ENST00000636674 ATF4P18848 351 aaPredicted RBP13.09□□□□□ -0.31
CLN6-215ENST00000636674 CXCR1P25024 350 aa13.09□□□□□ -0.31
CLN6-215ENST00000636674 HTR2CP28335 458 aa13.09□□□□□ -0.31
CLN6-215ENST00000636674 LTBRP36941 435 aa13.09□□□□□ -0.31
CLN6-215ENST00000636674 CD96P40200 585 aa13.09□□□□□ -0.31
CLN6-215ENST00000636674 FNTBP49356 437 aa13.09□□□□□ -0.31
CLN6-215ENST00000636674 MAZP56270 477 aaKnown RBP13.09□□□□□ -0.31
CLN6-215ENST00000636674 FGL1Q08830 312 aa13.09□□□□□ -0.31
CLN6-215ENST00000636674 ZNF345Q14585 488 aa13.09□□□□□ -0.31
CLN6-215ENST00000636674 ZNF273Q14593 569 aa13.09□□□□□ -0.31
CLN6-215ENST00000636674 KCNAB1Q14722 419 aa13.09□□□□□ -0.31
CLN6-215ENST00000636674 ZNF542PQ5EBM4 170 aa13.09□□□□□ -0.31
CLN6-215ENST00000636674 ARSKQ6UWY0 536 aa13.09□□□□□ -0.31
CLN6-215ENST00000636674 ADGRE4PQ86SQ3 457 aa13.09□□□□□ -0.31
CLN6-215ENST00000636674 ZBTB44Q8NCP5 570 aa13.09□□□□□ -0.31
CLN6-215ENST00000636674 DUSP19Q8WTR2 217 aa13.09□□□□□ -0.31
CLN6-215ENST00000636674 ADIPOR1Q96A54 375 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms