RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 BRICD5Q6PL45 260 aa16.93■□□□□ 0.3
TARDBP-228ENST00000629725 HIST3H2AQ7L7L0 130 aa16.93■□□□□ 0.3
TARDBP-228ENST00000629725 C10orf111Q8N326 155 aa16.93■□□□□ 0.3
TARDBP-228ENST00000629725 ZNF283Q8N7M2 679 aa16.93■□□□□ 0.3
TARDBP-228ENST00000629725 NOXO1Q8NFA2 376 aa16.93■□□□□ 0.3
TARDBP-228ENST00000629725 ABHD4Q8TB40 342 aa16.93■□□□□ 0.3
TARDBP-228ENST00000629725 HIST1H2ACQ93077 130 aa16.93■□□□□ 0.3
TARDBP-228ENST00000629725 ZBTB9Q96C00 473 aa16.93■□□□□ 0.3
TARDBP-228ENST00000629725 MAELQ96JY0 434 aaKnown RBP16.93■□□□□ 0.3
TARDBP-228ENST00000629725 MCHR1Q99705 422 aa16.93■□□□□ 0.3
TARDBP-228ENST00000629725 ARHGDIGQ99819 225 aa16.93■□□□□ 0.3
TARDBP-228ENST00000629725 PAIP2Q9BPZ3 127 aaKnown RBP16.93■□□□□ 0.3
TARDBP-228ENST00000629725 MRPL13Q9BYD1 178 aaKnown RBP16.93■□□□□ 0.3
TARDBP-228ENST00000629725 SLCO1B3Q9NPD5 702 aa16.93■□□□□ 0.3
TARDBP-228ENST00000629725 ZNF229Q9UJW7 825 aa16.93■□□□□ 0.3
TARDBP-228ENST00000629725 DOCK11Q5JSL3 2073 aa16.92■□□□□ 0.3
TARDBP-228ENST00000629725 FAM181BA6NEQ2 426 aa16.92■□□□□ 0.3
TARDBP-228ENST00000629725 F5H0A9 414 aaPredicted RBP16.92■□□□□ 0.3
TARDBP-228ENST00000629725 H3BSA7 217 aa16.92■□□□□ 0.3
TARDBP-228ENST00000629725 PLATP00750 562 aa16.92■□□□□ 0.3
TARDBP-228ENST00000629725 SLC6A2P23975 617 aa16.92■□□□□ 0.3
TARDBP-228ENST00000629725 AQP1P29972 269 aa16.92■□□□□ 0.3
TARDBP-228ENST00000629725 PPP1CBP62140 327 aa16.92■□□□□ 0.3
TARDBP-228ENST00000629725 SCARB2Q14108 478 aa16.92■□□□□ 0.3
TARDBP-228ENST00000629725 MPP2Q14168 576 aa16.92■□□□□ 0.3
TARDBP-228ENST00000629725 MTX3Q5HYI7 312 aa16.92■□□□□ 0.3
TARDBP-228ENST00000629725 TTC33Q6PID6 262 aaPredicted RBP16.92■□□□□ 0.3
TARDBP-228ENST00000629725 RFPL4BQ6ZWI9 263 aa16.92■□□□□ 0.3
TARDBP-228ENST00000629725 ARMC8Q8IUR7 673 aa16.92■□□□□ 0.3
TARDBP-228ENST00000629725 OR4F5Q8NH21 305 aa16.92■□□□□ 0.3
TARDBP-228ENST00000629725 CITED1Q99966 193 aa16.92■□□□□ 0.3
TARDBP-228ENST00000629725 KCNK9Q9NPC2 374 aa16.92■□□□□ 0.3
TARDBP-228ENST00000629725 SLC25A37Q9NYZ2 338 aa16.92■□□□□ 0.3
TARDBP-228ENST00000629725 IL20RAQ9UHF4 553 aa16.92■□□□□ 0.3
TARDBP-228ENST00000629725 MDFIC2A0A1B0GVS7 189 aa16.91■□□□□ 0.3
TARDBP-228ENST00000629725 MCIDASD6RGH6 385 aa16.91■□□□□ 0.3
TARDBP-228ENST00000629725 BLOC1S5-TXNDC5H3BN57 136 aa16.91■□□□□ 0.3
TARDBP-228ENST00000629725 KPNA4O00629 521 aaPredicted RBP16.91■□□□□ 0.3
TARDBP-228ENST00000629725 UBDO15205 165 aa16.91■□□□□ 0.3
TARDBP-228ENST00000629725 TIMM8AO60220 97 aaPredicted RBP16.91■□□□□ 0.3
TARDBP-228ENST00000629725 FMO6PO60774 539 aa16.91■□□□□ 0.3
TARDBP-228ENST00000629725 CRYBA1P05813 215 aa16.91■□□□□ 0.3
TARDBP-228ENST00000629725 ASAH2BP0C7U1 165 aa16.91■□□□□ 0.3
TARDBP-228ENST00000629725 UMPSP11172 480 aa16.91■□□□□ 0.3
TARDBP-228ENST00000629725 TNFRSF1AP19438 455 aa16.91■□□□□ 0.3
TARDBP-228ENST00000629725 TNFSF4P23510 183 aa16.91■□□□□ 0.3
TARDBP-228ENST00000629725 CDAP32320 146 aa16.91■□□□□ 0.3
TARDBP-228ENST00000629725 RAG2P55895 527 aa16.91■□□□□ 0.3
TARDBP-228ENST00000629725 MRPS34P82930 218 aaKnown RBP16.91■□□□□ 0.3
TARDBP-228ENST00000629725 CDK5R2Q13319 367 aa16.91■□□□□ 0.3
TARDBP-228ENST00000629725 ZMYND11Q15326 602 aa16.91■□□□□ 0.3
TARDBP-228ENST00000629725 C10orf128Q5T292 105 aa16.91■□□□□ 0.3
TARDBP-228ENST00000629725 BTNL3Q6UXE8 466 aa16.91■□□□□ 0.3
TARDBP-228ENST00000629725 LRRN1Q6UXK5 716 aa16.91■□□□□ 0.3
TARDBP-228ENST00000629725 AKR7LQ8NHP1 331 aa16.91■□□□□ 0.3
TARDBP-228ENST00000629725 SAMD8Q96LT4 415 aa16.91■□□□□ 0.3
TARDBP-228ENST00000629725 SEPHS2Q99611 448 aa16.91■□□□□ 0.3
TARDBP-228ENST00000629725 PARD6BQ9BYG5 372 aa16.91■□□□□ 0.3
TARDBP-228ENST00000629725 NANOGQ9H9S0 305 aa16.91■□□□□ 0.3
TARDBP-228ENST00000629725 THAP1Q9NVV9 213 aa16.91■□□□□ 0.3
TARDBP-228ENST00000629725 TRAV40A0A0B4J280 105 aa16.9■□□□□ 0.3
TARDBP-228ENST00000629725 A0A1W2PRG6 482 aa16.9■□□□□ 0.3
TARDBP-228ENST00000629725 CPSF4LA6NMK7 179 aaKnown RBP16.9■□□□□ 0.3
TARDBP-228ENST00000629725 CENPBD1B2RD01 187 aa16.9■□□□□ 0.3
TARDBP-228ENST00000629725 M0R3H8 397 aa16.9■□□□□ 0.3
TARDBP-228ENST00000629725 TIMM23O14925 209 aa16.9■□□□□ 0.3
TARDBP-228ENST00000629725 TGDSO95455 350 aa16.9■□□□□ 0.3
TARDBP-228ENST00000629725 NGFP01138 241 aa16.9■□□□□ 0.3
TARDBP-228ENST00000629725 ZNF133P52736 654 aaPredicted RBP16.9■□□□□ 0.3
TARDBP-228ENST00000629725 PSG4Q00888 419 aa16.9■□□□□ 0.3
TARDBP-228ENST00000629725 ENTPD8Q5MY95 495 aa16.9■□□□□ 0.3
TARDBP-228ENST00000629725 OLFML2AQ68BL7 652 aa16.9■□□□□ 0.3
TARDBP-228ENST00000629725 NANOGNBQ7Z5D8 188 aa16.9■□□□□ 0.3
TARDBP-228ENST00000629725 ZER1Q7Z7L7 766 aa16.9■□□□□ 0.3
TARDBP-228ENST00000629725 MSRB3Q8IXL7 192 aa16.9■□□□□ 0.3
TARDBP-228ENST00000629725 SMYD1Q8NB12 490 aa16.9■□□□□ 0.3
TARDBP-228ENST00000629725 UPRTQ96BW1 309 aa16.9■□□□□ 0.3
TARDBP-228ENST00000629725 SIGLEC11Q96RL6 698 aa16.9■□□□□ 0.3
TARDBP-228ENST00000629725 TMEM38AQ9H6F2 299 aa16.9■□□□□ 0.3
TARDBP-228ENST00000629725 SLAMF8Q9P0V8 285 aa16.9■□□□□ 0.3
TARDBP-228ENST00000629725 LRCH1Q9Y2L9 728 aa16.9■□□□□ 0.3
TARDBP-228ENST00000629725 SRRM5B3KS81 715 aa16.89■□□□□ 0.29
TARDBP-228ENST00000629725 TRMUO75648 421 aaKnown RBP16.89■□□□□ 0.29
TARDBP-228ENST00000629725 SLC2A10O95528 541 aa16.89■□□□□ 0.29
TARDBP-228ENST00000629725 F13BP05160 661 aa16.89■□□□□ 0.29
TARDBP-228ENST00000629725 ACADSP16219 412 aa16.89■□□□□ 0.29
TARDBP-228ENST00000629725 PPIBP23284 216 aaKnown RBP16.89■□□□□ 0.29
TARDBP-228ENST00000629725 MDH2P40926 338 aaKnown RBP16.89■□□□□ 0.29
TARDBP-228ENST00000629725 ARHGDIAP52565 204 aa16.89■□□□□ 0.29
TARDBP-228ENST00000629725 ERVK-25P63136 954 aa16.89■□□□□ 0.29
TARDBP-228ENST00000629725 PSG7Q13046 419 aa16.89■□□□□ 0.29
TARDBP-228ENST00000629725 SGCAQ16586 387 aa16.89■□□□□ 0.29
TARDBP-228ENST00000629725 TNFAIP8L3Q5GJ75 292 aa16.89■□□□□ 0.29
TARDBP-228ENST00000629725 LRIF1Q5T3J3 769 aa16.89■□□□□ 0.29
TARDBP-228ENST00000629725 HDDC2Q7Z4H3 204 aa16.89■□□□□ 0.29
TARDBP-228ENST00000629725 ALDH16A1Q8IZ83 802 aa16.89■□□□□ 0.29
TARDBP-228ENST00000629725 MUC20Q8N307 709 aaPredicted RBP16.89■□□□□ 0.29
TARDBP-228ENST00000629725 OR2Z1Q8NG97 314 aa16.89■□□□□ 0.29
TARDBP-228ENST00000629725 ADAMTS16Q8TE57 1224 aa16.89■□□□□ 0.29
TARDBP-228ENST00000629725 ASB10Q8WXI3 467 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms