RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 LOC100506127A0A0U1RQW1 187 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 ACOT7O00154 380 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 SMAD9O15198 467 aaKnown RBP8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 HLA-DQA2P01906 255 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 ENPP1P22413 925 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 RPS27P42677 84 aaKnown RBP8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 CARD18P57730 90 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 OR12D2P58182 307 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 RPS3AP61247 264 aaKnown RBP8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 PPIAP62937 165 aaKnown RBP8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 BDH1Q02338 343 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 HSF2Q03933 536 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 GLO1Q04760 184 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 LSAMPQ13449 338 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 PDSS1Q5T2R2 415 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 SLC16A9Q7RTY1 509 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 FJX1Q86VR8 437 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 KLBQ86Z14 1044 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 ZNF808Q8N4W9 903 aaPredicted RBP8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 OR2V1Q8NHB1 315 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 SLC25A44Q96H78 314 aaPredicted RBP8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 C4orf36Q96KX1 117 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 FOXN4Q96NZ1 517 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 DCLRE1CQ96SD1 692 aaKnown RBP8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 MNTQ99583 582 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 TRIM36Q9NQ86 728 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 BABAM2Q9NXR7 383 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 ZGRF1Q86YA3 2104 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 PNMA8CA0A1B0GUJ8 204 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 SLC35F4A4IF30 521 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 TVP23AA6NH52 213 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 ZNF726A6NNF4 738 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 CENPBD1B2RD01 187 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 NPIPA2E9PIF3 369 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 ZNF670-ZNF695F2Z2N8 137 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 NPIPA3F8WFD2 350 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 J3QLW9 94 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 IGHG1P01857 330 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 PGA4P0DJD7 388 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 PGA3P0DJD8 388 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 ZNF19P17023 458 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 PAX7P23759 505 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 NTF4P34130 210 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 PTGS2P35354 604 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 EIF1AXP47813 144 aaKnown RBP8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 LHX2P50458 406 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 AGFG1P52594 562 aaKnown RBP8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 CASP6P55212 293 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 CLRN1P58418 232 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 TAS2R43P59537 309 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 POU4F3Q15319 338 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 HIST3H3Q16695 136 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 CDONQ4KMG0 1287 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 XKRXQ6PP77 449 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 GFRALQ6UXV0 394 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 CDC20BQ86Y33 519 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 SYS1Q8N2H4 156 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 FAM109AQ8N4B1 249 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 ZIC4Q8N9L1 334 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 OR6N2Q8NGY6 317 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 OR6X1Q8NH79 312 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 DYNC2LI1Q8TCX1 351 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 SNX33Q8WV41 574 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 ADAD1Q96M93 576 aaKnown RBP8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 RBP7Q96R05 134 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 INTS14Q96SY0 518 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 CHCHD6Q9BRQ6 235 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 SLC6A15Q9H2J7 730 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 TIGARQ9NQ88 270 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 STUB1Q9UNE7 303 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 TMEM14AQ9Y6G1 99 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 PMF1-BGLAPU3KQ54 211 aa8.43□□□□□ -1.06
PDLIM5-223ENST00000627587 DVL2O14641 736 aa8.42□□□□□ -1.06
PDLIM5-223ENST00000627587 CXCL13O43927 109 aa8.42□□□□□ -1.06
PDLIM5-223ENST00000627587 KHDRBS3O75525 346 aaKnown RBP8.42□□□□□ -1.06
PDLIM5-223ENST00000627587 MPZL1O95297 269 aa8.42□□□□□ -1.06
PDLIM5-223ENST00000627587 NR2C1P13056 603 aa8.42□□□□□ -1.06
PDLIM5-223ENST00000627587 PRF1P14222 555 aa8.42□□□□□ -1.06
PDLIM5-223ENST00000627587 CELP19835 753 aa8.42□□□□□ -1.06
PDLIM5-223ENST00000627587 AGAP20933 346 aa8.42□□□□□ -1.06
PDLIM5-223ENST00000627587 GABRA5P31644 462 aa8.42□□□□□ -1.06
PDLIM5-223ENST00000627587 TDGF1P3P51864 188 aa8.42□□□□□ -1.06
PDLIM5-223ENST00000627587 CLDN17P56750 224 aa8.42□□□□□ -1.06
PDLIM5-223ENST00000627587 CLDN18P56856 261 aa8.42□□□□□ -1.06
PDLIM5-223ENST00000627587 RPS25P62851 125 aaKnown RBP8.42□□□□□ -1.06
PDLIM5-223ENST00000627587 CAMK2DQ13557 499 aa8.42□□□□□ -1.06
PDLIM5-223ENST00000627587 SLC17A1Q14916 467 aa8.42□□□□□ -1.06
PDLIM5-223ENST00000627587 SLC10A1Q14973 349 aa8.42□□□□□ -1.06
PDLIM5-223ENST00000627587 MEP1BQ16820 701 aa8.42□□□□□ -1.06
PDLIM5-223ENST00000627587 CD200R1LQ6Q8B3 271 aa8.42□□□□□ -1.06
PDLIM5-223ENST00000627587 GDPGP1Q6ZNW5 385 aa8.42□□□□□ -1.06
PDLIM5-223ENST00000627587 ZNF454Q8N9F8 522 aa8.42□□□□□ -1.06
PDLIM5-223ENST00000627587 NOXO1Q8NFA2 376 aa8.42□□□□□ -1.06
PDLIM5-223ENST00000627587 OR10D3Q8NH80 312 aa8.42□□□□□ -1.06
PDLIM5-223ENST00000627587 FNDC8Q8TC99 324 aa8.42□□□□□ -1.06
PDLIM5-223ENST00000627587 CPNE4Q96A23 557 aaPredicted RBP8.42□□□□□ -1.06
PDLIM5-223ENST00000627587 PELI1Q96FA3 418 aa8.42□□□□□ -1.06
PDLIM5-223ENST00000627587 ZNF385AQ96PM9 386 aaKnown RBP8.42□□□□□ -1.06
PDLIM5-223ENST00000627587 AMELYQ99218 206 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms