RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 HS3ST1O14792 307 aa17.64■□□□□ 0.41
PTCD3-220ENST00000627371 IFNGP01579 166 aa17.64■□□□□ 0.41
PTCD3-220ENST00000627371 CST2P09228 141 aa17.64■□□□□ 0.41
PTCD3-220ENST00000627371 MMP7P09237 267 aaPredicted RBP17.64■□□□□ 0.41
PTCD3-220ENST00000627371 NAAAQ02083 359 aa17.64■□□□□ 0.41
PTCD3-220ENST00000627371 TMEM53Q6P2H8 277 aa17.64■□□□□ 0.41
PTCD3-220ENST00000627371 SLC22A25Q6T423 547 aa17.64■□□□□ 0.41
PTCD3-220ENST00000627371 ZBTB46Q86UZ6 589 aa17.64■□□□□ 0.41
PTCD3-220ENST00000627371 DEPDC4Q8N2C3 294 aa17.64■□□□□ 0.41
PTCD3-220ENST00000627371 SLC37A3Q8NCC5 494 aa17.64■□□□□ 0.41
PTCD3-220ENST00000627371 LIME1Q9H400 295 aa17.64■□□□□ 0.41
PTCD3-220ENST00000627371 FN3KQ9H479 309 aa17.64■□□□□ 0.41
PTCD3-220ENST00000627371 RNF121Q9H920 327 aa17.64■□□□□ 0.41
PTCD3-220ENST00000627371 CMC2Q9NRP2 79 aa17.64■□□□□ 0.41
PTCD3-220ENST00000627371 B9D1Q9UPM9 204 aa17.64■□□□□ 0.41
PTCD3-220ENST00000627371 NAV2Q8IVL1 2488 aa17.64■□□□□ 0.41
PTCD3-220ENST00000627371 SAC3D1A6NKF1 404 aa17.63■□□□□ 0.41
PTCD3-220ENST00000627371 ANKRD65E5RJM6 399 aa17.63■□□□□ 0.41
PTCD3-220ENST00000627371 CRYAAP02489 173 aa17.63■□□□□ 0.41
PTCD3-220ENST00000627371 SCG5P05408 212 aa17.63■□□□□ 0.41
PTCD3-220ENST00000627371 CDH11P55287 796 aa17.63■□□□□ 0.41
PTCD3-220ENST00000627371 PPP2R2BQ00005 443 aa17.63■□□□□ 0.41
PTCD3-220ENST00000627371 CDK5Q00535 292 aa17.63■□□□□ 0.41
PTCD3-220ENST00000627371 ENDOGQ14249 297 aaKnown RBP17.63■□□□□ 0.41
PTCD3-220ENST00000627371 GINS1Q14691 196 aa17.63■□□□□ 0.41
PTCD3-220ENST00000627371 C20orf204Q6ZNR8 217 aa17.63■□□□□ 0.41
PTCD3-220ENST00000627371 CDH24Q86UP0 819 aa17.63■□□□□ 0.41
PTCD3-220ENST00000627371 ZNF584Q8IVC4 421 aa17.63■□□□□ 0.41
PTCD3-220ENST00000627371 CYB561A3Q8NBI2 242 aa17.63■□□□□ 0.41
PTCD3-220ENST00000627371 IL17RDQ8NFM7 739 aa17.63■□□□□ 0.41
PTCD3-220ENST00000627371 NEUROG1Q92886 237 aa17.63■□□□□ 0.41
PTCD3-220ENST00000627371 STMN2Q93045 179 aa17.63■□□□□ 0.41
PTCD3-220ENST00000627371 FBXO17Q96EF6 278 aa17.63■□□□□ 0.41
PTCD3-220ENST00000627371 MS4A3Q96HJ5 214 aa17.63■□□□□ 0.41
PTCD3-220ENST00000627371 FOXN4Q96NZ1 517 aa17.63■□□□□ 0.41
PTCD3-220ENST00000627371 KCNS3Q9BQ31 491 aa17.63■□□□□ 0.41
PTCD3-220ENST00000627371 RBM4Q9BWF3 364 aaKnown RBP17.63■□□□□ 0.41
PTCD3-220ENST00000627371 OSBPL10Q9BXB5 764 aa17.63■□□□□ 0.41
PTCD3-220ENST00000627371 SLC25A19Q9HC21 320 aa17.63■□□□□ 0.41
PTCD3-220ENST00000627371 SRA1Q9HD15 236 aaKnown RBP17.63■□□□□ 0.41
PTCD3-220ENST00000627371 CCNB1IP1Q9NPC3 277 aa17.63■□□□□ 0.41
PTCD3-220ENST00000627371 ST6GALNAC2Q9UJ37 374 aa17.63■□□□□ 0.41
PTCD3-220ENST00000627371 EDARQ9UNE0 448 aa17.63■□□□□ 0.41
PTCD3-220ENST00000627371 MOKQ9UQ07 419 aa17.63■□□□□ 0.41
PTCD3-220ENST00000627371 RTTNQ86VV8 2226 aa17.63■□□□□ 0.41
PTCD3-220ENST00000627371 ERICH4A6NGS2 130 aa17.62■□□□□ 0.41
PTCD3-220ENST00000627371 RIIAD1A6NNX1 92 aa17.62■□□□□ 0.41
PTCD3-220ENST00000627371 ATP6V1G2-DDX39BF2Z307 99 aa17.62■□□□□ 0.41
PTCD3-220ENST00000627371 MITFO75030 526 aaPredicted RBP17.62■□□□□ 0.41
PTCD3-220ENST00000627371 SERPINA5P05154 406 aa17.62■□□□□ 0.41
PTCD3-220ENST00000627371 GAAP10253 952 aa17.62■□□□□ 0.41
PTCD3-220ENST00000627371 ZNF3P17036 446 aa17.62■□□□□ 0.41
PTCD3-220ENST00000627371 ZNF32P17041 273 aa17.62■□□□□ 0.41
PTCD3-220ENST00000627371 CRISP1P54107 249 aa17.62■□□□□ 0.41
PTCD3-220ENST00000627371 ESRRGP62508 458 aa17.62■□□□□ 0.41
PTCD3-220ENST00000627371 GLO1Q04760 184 aa17.62■□□□□ 0.41
PTCD3-220ENST00000627371 CRMP1Q14194 572 aa17.62■□□□□ 0.41
PTCD3-220ENST00000627371 RAB39AQ14964 217 aa17.62■□□□□ 0.41
PTCD3-220ENST00000627371 ACSM5Q6NUN0 579 aa17.62■□□□□ 0.41
PTCD3-220ENST00000627371 UGT2A3Q6UWM9 527 aa17.62■□□□□ 0.41
PTCD3-220ENST00000627371 SYT9Q86SS6 491 aa17.62■□□□□ 0.41
PTCD3-220ENST00000627371 PQLC1Q8N2U9 271 aa17.62■□□□□ 0.41
PTCD3-220ENST00000627371 ZNF611Q8N823 705 aa17.62■□□□□ 0.41
PTCD3-220ENST00000627371 FBXW5Q969U6 566 aa17.62■□□□□ 0.41
PTCD3-220ENST00000627371 WACQ9BTA9 647 aa17.62■□□□□ 0.41
PTCD3-220ENST00000627371 ZNF416Q9BWM5 594 aa17.62■□□□□ 0.41
PTCD3-220ENST00000627371 EMC7Q9NPA0 242 aa17.62■□□□□ 0.41
PTCD3-220ENST00000627371 ENOPH1Q9UHY7 261 aa17.62■□□□□ 0.41
PTCD3-220ENST00000627371 TMEFF2Q9UIK5 374 aaPredicted RBP17.62■□□□□ 0.41
PTCD3-220ENST00000627371 POU2F3Q9UKI9 436 aa17.62■□□□□ 0.41
PTCD3-220ENST00000627371 IGHV2OR16-5A0A0B4J2B6 119 aa17.61■□□□□ 0.41
PTCD3-220ENST00000627371 C12orf71A8MTZ7 269 aa17.61■□□□□ 0.41
PTCD3-220ENST00000627371 IGFBP5P24593 272 aa17.61■□□□□ 0.41
PTCD3-220ENST00000627371 CALCRP30988 508 aa17.61■□□□□ 0.41
PTCD3-220ENST00000627371 SLC25A1P53007 311 aa17.61■□□□□ 0.41
PTCD3-220ENST00000627371 PCBD1P61457 104 aa17.61■□□□□ 0.41
PTCD3-220ENST00000627371 LSM6P62312 80 aaKnown RBP17.61■□□□□ 0.41
PTCD3-220ENST00000627371 KCNMB1Q16558 191 aa17.61■□□□□ 0.41
PTCD3-220ENST00000627371 B3GLCTQ6Y288 498 aa17.61■□□□□ 0.41
PTCD3-220ENST00000627371 OR2T4Q8NH00 348 aa17.61■□□□□ 0.41
PTCD3-220ENST00000627371 C11orf40Q8WZ69 217 aa17.61■□□□□ 0.41
PTCD3-220ENST00000627371 NINJ1Q92982 152 aa17.61■□□□□ 0.41
PTCD3-220ENST00000627371 CIB1Q99828 191 aa17.61■□□□□ 0.41
PTCD3-220ENST00000627371 RBM4BQ9BQ04 359 aaKnown RBP17.61■□□□□ 0.41
PTCD3-220ENST00000627371 NMNAT2Q9BZQ4 307 aa17.61■□□□□ 0.41
PTCD3-220ENST00000627371 C1orf198Q9H425 327 aa17.61■□□□□ 0.41
PTCD3-220ENST00000627371 CISD1Q9NZ45 108 aaKnown RBP17.61■□□□□ 0.41
PTCD3-220ENST00000627371 SURF4O15260 269 aa17.6■□□□□ 0.41
PTCD3-220ENST00000627371 MPZL1O95297 269 aa17.6■□□□□ 0.41
PTCD3-220ENST00000627371 GPANK1O95872 356 aa17.6■□□□□ 0.41
PTCD3-220ENST00000627371 RAF1P04049 648 aa17.6■□□□□ 0.41
PTCD3-220ENST00000627371 HMGN1P05114 100 aa17.6■□□□□ 0.41
PTCD3-220ENST00000627371 CENPAP49450 140 aa17.6■□□□□ 0.41
PTCD3-220ENST00000627371 HSF2Q03933 536 aa17.6■□□□□ 0.41
PTCD3-220ENST00000627371 PLP2Q04941 152 aa17.6■□□□□ 0.41
PTCD3-220ENST00000627371 DBPQ10586 325 aaPredicted RBP17.6■□□□□ 0.41
PTCD3-220ENST00000627371 PABPC1L2AQ5JQF8 200 aa17.6■□□□□ 0.41
PTCD3-220ENST00000627371 SLC26A10Q8NG04 563 aa17.6■□□□□ 0.41
PTCD3-220ENST00000627371 TEX12Q9BXU0 123 aa17.6■□□□□ 0.41
PTCD3-220ENST00000627371 PLEKHA6Q9Y2H5 1048 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms