RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 IGHV4-30-2A0A087WSY4 118 aa19.25■□□□□ 0.67
SF1-220ENST00000626028 LOC390937A0A1W2PQ73 354 aa19.25■□□□□ 0.67
SF1-220ENST00000626028 UNC119BA6NIH7 251 aa19.25■□□□□ 0.67
SF1-220ENST00000626028 C12orf71A8MTZ7 269 aa19.25■□□□□ 0.67
SF1-220ENST00000626028 TXNDC12O95881 172 aa19.25■□□□□ 0.67
SF1-220ENST00000626028 T-ENOLP0DO92 83 aa19.25■□□□□ 0.67
SF1-220ENST00000626028 MSR1P21757 451 aa19.25■□□□□ 0.67
SF1-220ENST00000626028 FPR3P25089 353 aa19.25■□□□□ 0.67
SF1-220ENST00000626028 APLNRP35414 380 aa19.25■□□□□ 0.67
SF1-220ENST00000626028 RPS6KA3P51812 740 aa19.25■□□□□ 0.67
SF1-220ENST00000626028 SGCAQ16586 387 aa19.25■□□□□ 0.67
SF1-220ENST00000626028 LCN8Q6JVE9 175 aa19.25■□□□□ 0.67
SF1-220ENST00000626028 SMARCD3Q6STE5 483 aa19.25■□□□□ 0.67
SF1-220ENST00000626028 ZNF540Q8NDQ6 660 aa19.25■□□□□ 0.67
SF1-220ENST00000626028 HTRA1Q92743 480 aa19.25■□□□□ 0.67
SF1-220ENST00000626028 Q96M85 177 aa19.25■□□□□ 0.67
SF1-220ENST00000626028 DYNLRB1Q9NP97 96 aa19.25■□□□□ 0.67
SF1-220ENST00000626028 TIMM10BQ9Y5J6 103 aa19.25■□□□□ 0.67
SF1-220ENST00000626028 A0A096LNT2 108 aa19.24■□□□□ 0.67
SF1-220ENST00000626028 IMPA2O14732 288 aa19.24■□□□□ 0.67
SF1-220ENST00000626028 TP53P04637 393 aaPredicted RBP19.24■□□□□ 0.67
SF1-220ENST00000626028 ZNF32P17041 273 aa19.24■□□□□ 0.67
SF1-220ENST00000626028 HOXB4P17483 251 aaPredicted RBP19.24■□□□□ 0.67
SF1-220ENST00000626028 RRM2P31350 389 aa19.24■□□□□ 0.67
SF1-220ENST00000626028 MAGEA2P43356 314 aa19.24■□□□□ 0.67
SF1-220ENST00000626028 SELENOVP59797 346 aa19.24■□□□□ 0.67
SF1-220ENST00000626028 MESTQ5EB52 335 aa19.24■□□□□ 0.67
SF1-220ENST00000626028 PABPC1L2AQ5JQF8 200 aa19.24■□□□□ 0.67
SF1-220ENST00000626028 ZER1Q7Z7L7 766 aa19.24■□□□□ 0.67
SF1-220ENST00000626028 MRPL37Q9BZE1 423 aaKnown RBP19.24■□□□□ 0.67
SF1-220ENST00000626028 VSX1Q9NZR4 365 aaPredicted RBP19.24■□□□□ 0.67
SF1-220ENST00000626028 GPR160Q9UJ42 338 aa19.24■□□□□ 0.67
SF1-220ENST00000626028 TEX13CA0A0J9YWL9 993 aa19.23■□□□□ 0.67
SF1-220ENST00000626028 M0R233 179 aa19.23■□□□□ 0.67
SF1-220ENST00000626028 TLX2O43763 284 aaPredicted RBP19.23■□□□□ 0.67
SF1-220ENST00000626028 GPRIN2O60269 458 aa19.23■□□□□ 0.67
SF1-220ENST00000626028 ICMTO60725 284 aa19.23■□□□□ 0.67
SF1-220ENST00000626028 ZNF250P15622 560 aa19.23■□□□□ 0.67
SF1-220ENST00000626028 HOXB6P17509 224 aaKnown RBP19.23■□□□□ 0.67
SF1-220ENST00000626028 STOMP27105 288 aa19.23■□□□□ 0.67
SF1-220ENST00000626028 UCP2P55851 309 aa19.23■□□□□ 0.67
SF1-220ENST00000626028 FXYD6P3P58550 94 aa19.23■□□□□ 0.67
SF1-220ENST00000626028 KRR1Q13601 381 aaKnown RBP19.23■□□□□ 0.67
SF1-220ENST00000626028 RGS7BPQ6MZT1 257 aaPredicted RBP19.23■□□□□ 0.67
SF1-220ENST00000626028 C1orf94Q6P1W5 598 aa19.23■□□□□ 0.67
SF1-220ENST00000626028 DHFR2Q86XF0 187 aa19.23■□□□□ 0.67
SF1-220ENST00000626028 CLDN22Q8N7P3 220 aa19.23■□□□□ 0.67
SF1-220ENST00000626028 ASB9Q96DX5 294 aa19.23■□□□□ 0.67
SF1-220ENST00000626028 PIMREGQ9BSJ6 248 aa19.23■□□□□ 0.67
SF1-220ENST00000626028 TRIM15Q9C019 465 aa19.23■□□□□ 0.67
SF1-220ENST00000626028 VWC2LB2RUY7 222 aa19.22■□□□□ 0.67
SF1-220ENST00000626028 ARPC3O15145 178 aa19.22■□□□□ 0.67
SF1-220ENST00000626028 OR10H3O60404 316 aa19.22■□□□□ 0.67
SF1-220ENST00000626028 LAP3P28838 519 aa19.22■□□□□ 0.67
SF1-220ENST00000626028 GSSP48637 474 aa19.22■□□□□ 0.67
SF1-220ENST00000626028 PSG4Q00888 419 aa19.22■□□□□ 0.67
SF1-220ENST00000626028 KRTAP1-1Q07627 177 aa19.22■□□□□ 0.67
SF1-220ENST00000626028 RFX4Q33E94 735 aa19.22■□□□□ 0.67
SF1-220ENST00000626028 RPL13AP3Q6NVV1 102 aa19.22■□□□□ 0.67
SF1-220ENST00000626028 CYP2R1Q6VVX0 501 aa19.22■□□□□ 0.67
SF1-220ENST00000626028 THSD4Q6ZMP0 1018 aa19.22■□□□□ 0.67
SF1-220ENST00000626028 Q71RC1 249 aaPredicted RBP19.22■□□□□ 0.67
SF1-220ENST00000626028 CPEB3Q8NE35 698 aaKnown RBP19.22■□□□□ 0.67
SF1-220ENST00000626028 FANK1Q8TC84 345 aa19.22■□□□□ 0.67
SF1-220ENST00000626028 C11orf40Q8WZ69 217 aa19.22■□□□□ 0.67
SF1-220ENST00000626028 POM121L2Q96KW2 1035 aa19.22■□□□□ 0.67
SF1-220ENST00000626028 SNX18Q96RF0 628 aa19.22■□□□□ 0.67
SF1-220ENST00000626028 OR2H1Q9GZK4 316 aa19.22■□□□□ 0.67
SF1-220ENST00000626028 POLE4Q9NR33 117 aa19.22■□□□□ 0.67
SF1-220ENST00000626028 TAS2R1Q9NYW7 299 aa19.22■□□□□ 0.67
SF1-220ENST00000626028 REV1Q9UBZ9 1251 aa19.22■□□□□ 0.67
SF1-220ENST00000626028 IGLV3-9A0A075B6K5 115 aa19.21■□□□□ 0.67
SF1-220ENST00000626028 A0A1W2PPL8 197 aa19.21■□□□□ 0.67
SF1-220ENST00000626028 TCRBV5S2A0A599 114 aa19.21■□□□□ 0.67
SF1-220ENST00000626028 IDH3BO43837 385 aa19.21■□□□□ 0.67
SF1-220ENST00000626028 CD5LO43866 347 aa19.21■□□□□ 0.67
SF1-220ENST00000626028 STAMBPO95630 424 aa19.21■□□□□ 0.67
SF1-220ENST00000626028 COX5BP10606 129 aa19.21■□□□□ 0.67
SF1-220ENST00000626028 ATP6V1B2P21281 511 aa19.21■□□□□ 0.67
SF1-220ENST00000626028 GIFP27352 417 aa19.21■□□□□ 0.67
SF1-220ENST00000626028 APEX1P27695 318 aaKnown RBP19.21■□□□□ 0.67
SF1-220ENST00000626028 SLC6A6P31641 620 aa19.21■□□□□ 0.67
SF1-220ENST00000626028 LSM6P62312 80 aaKnown RBP19.21■□□□□ 0.67
SF1-220ENST00000626028 PPP2R2BQ00005 443 aa19.21■□□□□ 0.67
SF1-220ENST00000626028 TSPAN31Q12999 210 aa19.21■□□□□ 0.67
SF1-220ENST00000626028 GK3PQ14409 553 aa19.21■□□□□ 0.67
SF1-220ENST00000626028 MOGQ16653 247 aa19.21■□□□□ 0.67
SF1-220ENST00000626028 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.21■□□□□ 0.675e-11■■■■■ 37.8
SF1-220ENST00000626028 PGM2L1Q6PCE3 622 aa19.21■□□□□ 0.67
SF1-220ENST00000626028 DNM1P34Q6PK57 102 aa19.21■□□□□ 0.67
SF1-220ENST00000626028 RINLQ6ZS11 566 aa19.21■□□□□ 0.67
SF1-220ENST00000626028 TRPM8Q7Z2W7 1104 aa19.21■□□□□ 0.67
SF1-220ENST00000626028 BCAS4Q8TDM0 211 aa19.21■□□□□ 0.67
SF1-220ENST00000626028 GNPDA2Q8TDQ7 276 aa19.21■□□□□ 0.67
SF1-220ENST00000626028 EIF3KQ9UBQ5 218 aaKnown RBP19.21■□□□□ 0.67
SF1-220ENST00000626028 IER3IP1Q9Y5U9 82 aa19.21■□□□□ 0.67
SF1-220ENST00000626028 SONP18583 2426 aaKnown RBP19.2■□□□□ 0.66
SF1-220ENST00000626028 ADRA2AP08913 450 aa19.2■□□□□ 0.66
SF1-220ENST00000626028 USF1P22415 310 aaPredicted RBP19.2■□□□□ 0.66
SF1-220ENST00000626028 CRABP1P29762 137 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms