RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 DOCK11Q5JSL3 2073 aa9.32□□□□□ -0.92
DDX41-218ENST00000625286 PPIAL4EA0A075B759 164 aa9.31□□□□□ -0.92
DDX41-218ENST00000625286 PPIAL4CA0A0B4J2A2 164 aa9.31□□□□□ -0.92
DDX41-218ENST00000625286 C5orf49A4QMS7 147 aa9.31□□□□□ -0.92
DDX41-218ENST00000625286 PPIAL4DF5H284 164 aa9.31□□□□□ -0.92
DDX41-218ENST00000625286 PTHP01270 115 aa9.31□□□□□ -0.92
DDX41-218ENST00000625286 PPIAL4FP0DN26 164 aa9.31□□□□□ -0.92
DDX41-218ENST00000625286 UMPSP11172 480 aa9.31□□□□□ -0.92
DDX41-218ENST00000625286 TNFRSF1BP20333 461 aa9.31□□□□□ -0.92
DDX41-218ENST00000625286 DRD4P21917 467 aa9.31□□□□□ -0.92
DDX41-218ENST00000625286 FPR2P25090 351 aa9.31□□□□□ -0.92
DDX41-218ENST00000625286 APLNRP35414 380 aa9.31□□□□□ -0.92
DDX41-218ENST00000625286 ERVK-25P63136 954 aa9.31□□□□□ -0.92
DDX41-218ENST00000625286 DEFA6Q01524 100 aa9.31□□□□□ -0.92
DDX41-218ENST00000625286 PLP2Q04941 152 aa9.31□□□□□ -0.92
DDX41-218ENST00000625286 FOXL1Q12952 345 aa9.31□□□□□ -0.92
DDX41-218ENST00000625286 ZNF718Q3SXZ3 478 aa9.31□□□□□ -0.92
DDX41-218ENST00000625286 PDLIM3Q53GG5 364 aaPredicted RBP9.31□□□□□ -0.92
DDX41-218ENST00000625286 SLC25A47Q6Q0C1 308 aa9.31□□□□□ -0.92
DDX41-218ENST00000625286 Q6ZR03 302 aa9.31□□□□□ -0.92
DDX41-218ENST00000625286 JAZF1Q86VZ6 243 aa9.31□□□□□ -0.92
DDX41-218ENST00000625286 TEX29Q8N6K0 151 aa9.31□□□□□ -0.92
DDX41-218ENST00000625286 TMEM255BQ8WV15 326 aa9.31□□□□□ -0.92
DDX41-218ENST00000625286 NSMAFQ92636 917 aa9.31□□□□□ -0.92
DDX41-218ENST00000625286 TIMD4Q96H15 378 aa9.31□□□□□ -0.92
DDX41-218ENST00000625286 C7orf26Q96N11 449 aa9.31□□□□□ -0.92
DDX41-218ENST00000625286 DCLRE1CQ96SD1 692 aaKnown RBP9.31□□□□□ -0.92
DDX41-218ENST00000625286 SLC19A3Q9BZV2 496 aa9.31□□□□□ -0.92
DDX41-218ENST00000625286 EVA1AQ9H8M9 152 aa9.31□□□□□ -0.92
DDX41-218ENST00000625286 NTN4Q9HB63 628 aa9.31□□□□□ -0.92
DDX41-218ENST00000625286 TMBIM4Q9HC24 238 aa9.31□□□□□ -0.92
DDX41-218ENST00000625286 DDX28Q9NUL7 540 aaKnown RBP9.31□□□□□ -0.92
DDX41-218ENST00000625286 PURGQ9UJV8 347 aaKnown RBP9.31□□□□□ -0.92
DDX41-218ENST00000625286 ANGPT4Q9Y264 503 aa9.31□□□□□ -0.92
DDX41-218ENST00000625286 POLR3KQ9Y2Y1 108 aaPredicted RBP9.31□□□□□ -0.92
DDX41-218ENST00000625286 ISPDA4D126 451 aa9.3□□□□□ -0.92
DDX41-218ENST00000625286 EVPLLA8MZ36 301 aa9.3□□□□□ -0.92
DDX41-218ENST00000625286 ICMTO60725 284 aa9.3□□□□□ -0.92
DDX41-218ENST00000625286 OR7A10O76100 309 aa9.3□□□□□ -0.92
DDX41-218ENST00000625286 MT-ND1P03886 318 aa9.3□□□□□ -0.92
DDX41-218ENST00000625286 HIST1H2ABP04908 130 aa9.3□□□□□ -0.92
DDX41-218ENST00000625286 CD55P08174 381 aa9.3□□□□□ -0.92
DDX41-218ENST00000625286 SBK2P0C263 348 aa9.3□□□□□ -0.92
DDX41-218ENST00000625286 ZNF12P17014 697 aa9.3□□□□□ -0.92
DDX41-218ENST00000625286 SLC6A9P48067 706 aa9.3□□□□□ -0.92
DDX41-218ENST00000625286 ZNF84P51523 738 aa9.3□□□□□ -0.92
DDX41-218ENST00000625286 STX1BP61266 288 aa9.3□□□□□ -0.92
DDX41-218ENST00000625286 PAX2Q02962 417 aa9.3□□□□□ -0.92
DDX41-218ENST00000625286 HSF2Q03933 536 aa9.3□□□□□ -0.92
DDX41-218ENST00000625286 PSG7Q13046 419 aa9.3□□□□□ -0.92
DDX41-218ENST00000625286 ZNF154Q13106 437 aa9.3□□□□□ -0.92
DDX41-218ENST00000625286 SGCAQ16586 387 aa9.3□□□□□ -0.92
DDX41-218ENST00000625286 MOGQ16653 247 aa9.3□□□□□ -0.92
DDX41-218ENST00000625286 FAM27BQ5VT28 67 aa9.3□□□□□ -0.92
DDX41-218ENST00000625286 ZNF774Q6NX45 483 aa9.3□□□□□ -0.92
DDX41-218ENST00000625286 HIST3H2AQ7L7L0 130 aa9.3□□□□□ -0.92
DDX41-218ENST00000625286 NANOGNBQ7Z5D8 188 aa9.3□□□□□ -0.92
DDX41-218ENST00000625286 C11orf65Q8NCR3 313 aa9.3□□□□□ -0.92
DDX41-218ENST00000625286 HIST1H2ACQ93077 130 aa9.3□□□□□ -0.92
DDX41-218ENST00000625286 MPP4Q96JB8 637 aa9.3□□□□□ -0.92
DDX41-218ENST00000625286 SIGLEC11Q96RL6 698 aa9.3□□□□□ -0.92
DDX41-218ENST00000625286 CCDC28BQ9BUN5 200 aa9.3□□□□□ -0.92
DDX41-218ENST00000625286 OR2H1Q9GZK4 316 aa9.3□□□□□ -0.92
DDX41-218ENST00000625286 LRMDAQ9H2I8 198 aa9.3□□□□□ -0.92
DDX41-218ENST00000625286 KAT8Q9H7Z6 458 aaKnown RBP9.3□□□□□ -0.92
DDX41-218ENST00000625286 UNKLQ9H9P5 680 aaKnown RBP9.3□□□□□ -0.92
DDX41-218ENST00000625286 NANOGQ9H9S0 305 aa9.3□□□□□ -0.92
DDX41-218ENST00000625286 INIPQ9NRY2 104 aa9.3□□□□□ -0.92
DDX41-218ENST00000625286 NKIRAS1Q9NYS0 192 aa9.3□□□□□ -0.92
DDX41-218ENST00000625286 NUP50Q9UKX7 468 aa9.3□□□□□ -0.92
DDX41-218ENST00000625286 CORO2BQ9UQ03 480 aa9.3□□□□□ -0.92
DDX41-218ENST00000625286 NPTNQ9Y639 398 aa9.3□□□□□ -0.92
DDX41-218ENST00000625286 A0A1W2PRG6 482 aa9.29□□□□□ -0.92
DDX41-218ENST00000625286 CENPBD1B2RD01 187 aa9.29□□□□□ -0.92
DDX41-218ENST00000625286 F5H0A9 414 aaPredicted RBP9.29□□□□□ -0.92
DDX41-218ENST00000625286 POLR3GO15318 223 aaPredicted RBP9.29□□□□□ -0.92
DDX41-218ENST00000625286 SHOX2O60902 331 aaPredicted RBP9.29□□□□□ -0.92
DDX41-218ENST00000625286 ENTPD5O75356 428 aa9.29□□□□□ -0.92
DDX41-218ENST00000625286 TGDSO95455 350 aa9.29□□□□□ -0.92
DDX41-218ENST00000625286 IGHV4-38-2P0DP08 117 aa9.29□□□□□ -0.92
DDX41-218ENST00000625286 LAP3P28838 519 aa9.29□□□□□ -0.92
DDX41-218ENST00000625286 GCH1P30793 250 aa9.29□□□□□ -0.92
DDX41-218ENST00000625286 CD80P33681 288 aa9.29□□□□□ -0.92
DDX41-218ENST00000625286 ERFP50548 548 aa9.29□□□□□ -0.92
DDX41-218ENST00000625286 ATP4BP51164 291 aa9.29□□□□□ -0.92
DDX41-218ENST00000625286 PPP1CBP62140 327 aa9.29□□□□□ -0.92
DDX41-218ENST00000625286 SRSF4Q08170 494 aaKnown RBP9.29□□□□□ -0.92
DDX41-218ENST00000625286 CDK5R2Q13319 367 aa9.29□□□□□ -0.92
DDX41-218ENST00000625286 PIN1Q13526 163 aaPredicted RBP9.29□□□□□ -0.92
DDX41-218ENST00000625286 FHL1Q13642 323 aa9.29□□□□□ -0.92
DDX41-218ENST00000625286 ENDOGQ14249 297 aaKnown RBP9.29□□□□□ -0.92
DDX41-218ENST00000625286 ZMYND11Q15326 602 aa9.29□□□□□ -0.92
DDX41-218ENST00000625286 SLC9A3R2Q15599 337 aa9.29□□□□□ -0.92
DDX41-218ENST00000625286 CYP51A1Q16850 503 aa9.29□□□□□ -0.92
DDX41-218ENST00000625286 TREML4Q6UXN2 200 aa9.29□□□□□ -0.92
DDX41-218ENST00000625286 DHDDSQ86SQ9 333 aa9.29□□□□□ -0.92
DDX41-218ENST00000625286 LRRC28Q86X40 367 aaPredicted RBP9.29□□□□□ -0.92
DDX41-218ENST00000625286 DPP10Q8N608 796 aa9.29□□□□□ -0.92
DDX41-218ENST00000625286 ZNF283Q8N7M2 679 aa9.29□□□□□ -0.92
DDX41-218ENST00000625286 ABHD4Q8TB40 342 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms