RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 MAMSTRQ6ZN01 415 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 ZNF679Q8IYX0 411 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 OR6M1Q8NGM8 313 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 ASF1BQ9NVP2 202 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 MRPS18AQ9NVS2 196 aaKnown RBP11.66□□□□□ -0.54
MSH6-215ENST00000622629 B3GNT2Q9NY97 397 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 SDK2Q58EX2 2172 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 LOC107986453A0A1B0GWG9 222 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 H0YIG0 161 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 FARS2O95363 451 aaKnown RBP11.66□□□□□ -0.54
MSH6-215ENST00000622629 GALP22466 123 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 S100A11P31949 105 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 CSNK1A1P48729 337 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 AFF3P51826 1226 aaKnown RBP11.66□□□□□ -0.54
MSH6-215ENST00000622629 MEF2DQ14814 521 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 NKAIN1Q4KMZ8 207 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 FAM76BQ5HYJ3 339 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 DMKNQ6E0U4 476 aaPredicted RBP11.66□□□□□ -0.54
MSH6-215ENST00000622629 LRRC18Q8N456 261 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 DUSP18Q8NEJ0 188 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 TMEM185AQ8NFB2 350 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 OR14L1PQ8NHC6 308 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 C8orf44Q96CB5 159 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 SIGLEC11Q96RL6 698 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 CDC6Q99741 560 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 PRSS27Q9BQR3 290 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 LAT2Q9GZY6 243 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 PPP1R3EQ9H7J1 279 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 CHRNA9Q9UGM1 479 aa11.66□□□□□ -0.54
MSH6-215ENST00000622629 PRSS37A4D1T9 235 aa11.65□□□□□ -0.54
MSH6-215ENST00000622629 CCSO14618 274 aa11.65□□□□□ -0.54
MSH6-215ENST00000622629 CD3DP04234 171 aa11.65□□□□□ -0.54
MSH6-215ENST00000622629 SERPINA5P05154 406 aa11.65□□□□□ -0.54
MSH6-215ENST00000622629 SERPINA2P20848 420 aa11.65□□□□□ -0.54
MSH6-215ENST00000622629 SLC6A1P30531 599 aa11.65□□□□□ -0.54
MSH6-215ENST00000622629 SLC36A2Q495M3 483 aa11.65□□□□□ -0.54
MSH6-215ENST00000622629 C16orf47Q6ZP98 133 aaPredicted RBP11.65□□□□□ -0.54
MSH6-215ENST00000622629 H1FNTQ75WM6 255 aaPredicted RBP11.65□□□□□ -0.54
MSH6-215ENST00000622629 EID2Q8N6I1 236 aa11.65□□□□□ -0.54
MSH6-215ENST00000622629 ZNF454Q8N9F8 522 aa11.65□□□□□ -0.54
MSH6-215ENST00000622629 FOXRED1Q96CU9 486 aaPredicted RBP11.65□□□□□ -0.54
MSH6-215ENST00000622629 NAA11Q9BSU3 229 aaPredicted RBP11.65□□□□□ -0.54
MSH6-215ENST00000622629 NUDT9Q9BW91 350 aa11.65□□□□□ -0.54
MSH6-215ENST00000622629 DTX4Q9Y2E6 619 aa11.65□□□□□ -0.54
MSH6-215ENST00000622629 FXYD4P59646 89 aa11.65□□□□□ -0.54
MSH6-215ENST00000622629 PLGLB1Q02325 96 aa11.65□□□□□ -0.54
MSH6-215ENST00000622629 HSD17B8Q92506 261 aa11.65□□□□□ -0.54
MSH6-215ENST00000622629 MIB2Q96AX9 1013 aa11.65□□□□□ -0.54
MSH6-215ENST00000622629 EPOPA6NHQ4 379 aa11.65□□□□□ -0.54
MSH6-215ENST00000622629 RSU1Q15404 277 aa11.65□□□□□ -0.54
MSH6-215ENST00000622629 CD226Q15762 336 aa11.65□□□□□ -0.54
MSH6-215ENST00000622629 BCL2A1Q16548 175 aa11.65□□□□□ -0.54
MSH6-215ENST00000622629 ST3GAL2Q16842 350 aa11.65□□□□□ -0.54
MSH6-215ENST00000622629 C1QL3Q5VWW1 255 aa11.65□□□□□ -0.54
MSH6-215ENST00000622629 STX12Q86Y82 276 aa11.65□□□□□ -0.54
MSH6-215ENST00000622629 GPR137CQ8N3F9 429 aa11.65□□□□□ -0.54
MSH6-215ENST00000622629 STOML3Q8TAV4 291 aa11.65□□□□□ -0.54
MSH6-215ENST00000622629 YIPF5Q969M3 257 aa11.65□□□□□ -0.54
MSH6-215ENST00000622629 TAAR8Q969N4 342 aa11.65□□□□□ -0.54
MSH6-215ENST00000622629 A0A1W2PNR3 127 aa11.64□□□□□ -0.55
MSH6-215ENST00000622629 HOXB5P09067 269 aa11.64□□□□□ -0.55
MSH6-215ENST00000622629 JMJD7P0C870 316 aa11.64□□□□□ -0.55
MSH6-215ENST00000622629 GABRR1P24046 479 aa11.64□□□□□ -0.55
MSH6-215ENST00000622629 EXOSC2Q13868 293 aaKnown RBP11.64□□□□□ -0.55
MSH6-215ENST00000622629 HAGHLQ6PII5 290 aaPredicted RBP11.64□□□□□ -0.55
MSH6-215ENST00000622629 DGAT2L6Q6ZPD8 337 aa11.64□□□□□ -0.55
MSH6-215ENST00000622629 ANGPTL5Q86XS5 388 aa11.64□□□□□ -0.55
MSH6-215ENST00000622629 PTDSS2Q9BVG9 487 aa11.64□□□□□ -0.55
MSH6-215ENST00000622629 ZNF700Q9H0M5 742 aa11.64□□□□□ -0.55
MSH6-215ENST00000622629 ZNF442Q9H7R0 627 aa11.64□□□□□ -0.55
MSH6-215ENST00000622629 PLEKHJ1Q9NW61 149 aa11.64□□□□□ -0.55
MSH6-215ENST00000622629 B9D1Q9UPM9 204 aa11.64□□□□□ -0.55
MSH6-215ENST00000622629 ASXL3Q9C0F0 2248 aa11.64□□□□□ -0.55
MSH6-215ENST00000622629 PTPRDP23468 1912 aa11.64□□□□□ -0.55
MSH6-215ENST00000622629 FAM230AA0A1W2PPH8 454 aa11.64□□□□□ -0.55
MSH6-215ENST00000622629 H7C2Y5 167 aa11.64□□□□□ -0.55
MSH6-215ENST00000622629 IL33O95760 270 aa11.64□□□□□ -0.55
MSH6-215ENST00000622629 P04436 131 aa11.64□□□□□ -0.55
MSH6-215ENST00000622629 TBXA2RP21731 343 aa11.64□□□□□ -0.55
MSH6-215ENST00000622629 CLDN17P56750 224 aa11.64□□□□□ -0.55
MSH6-215ENST00000622629 PMPCAQ10713 525 aa11.64□□□□□ -0.55
MSH6-215ENST00000622629 SLC17A1Q14916 467 aa11.64□□□□□ -0.55
MSH6-215ENST00000622629 EMC4Q5J8M3 183 aa11.64□□□□□ -0.55
MSH6-215ENST00000622629 CPNE2Q96FN4 548 aaPredicted RBP11.64□□□□□ -0.55
MSH6-215ENST00000622629 VSTM2LQ96N03 204 aa11.64□□□□□ -0.55
MSH6-215ENST00000622629 PARPBPQ9NWS1 579 aa11.64□□□□□ -0.55
MSH6-215ENST00000622629 ABI3Q9P2A4 366 aa11.64□□□□□ -0.55
MSH6-215ENST00000622629 A0A1B0GV50 99 aa11.64□□□□□ -0.55
MSH6-215ENST00000622629 AGPAT2O15120 278 aa11.64□□□□□ -0.55
MSH6-215ENST00000622629 SCO1O75880 301 aa11.64□□□□□ -0.55
MSH6-215ENST00000622629 ZNF93P35789 620 aaPredicted RBP11.64□□□□□ -0.55
MSH6-215ENST00000622629 DCDP81605 110 aaKnown RBP11.64□□□□□ -0.55
MSH6-215ENST00000622629 SRYQ05066 204 aa11.64□□□□□ -0.55
MSH6-215ENST00000622629 TCEAL6Q6IPX3 200 aa11.64□□□□□ -0.55
MSH6-215ENST00000622629 RHOUQ7L0Q8 258 aa11.64□□□□□ -0.55
MSH6-215ENST00000622629 ADGRE4PQ86SQ3 457 aa11.64□□□□□ -0.55
MSH6-215ENST00000622629 ZNF565Q8N9K5 539 aa11.64□□□□□ -0.55
MSH6-215ENST00000622629 NECAB3Q96P71 396 aaPredicted RBP11.64□□□□□ -0.55
MSH6-215ENST00000622629 ABHD6Q9BV23 337 aa11.64□□□□□ -0.55
MSH6-215ENST00000622629 SLC7A11Q9UPY5 501 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms