RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 TBX5Q99593 518 aa15.71■□□□□ 0.11
PTCHD3-202ENST00000622555 WDR76Q9H967 626 aa15.71■□□□□ 0.11
PTCHD3-202ENST00000622555 MARCH7Q9H992 704 aa15.71■□□□□ 0.11
PTCHD3-202ENST00000622555 MRPL22Q9NWU5 206 aaKnown RBP15.71■□□□□ 0.11
PTCHD3-202ENST00000622555 PRSS50Q9UI38 385 aa15.71■□□□□ 0.11
PTCHD3-202ENST00000622555 UGT2A1Q9Y4X1 527 aa15.71■□□□□ 0.11
PTCHD3-202ENST00000622555 POLEQ07864 2286 aa15.71■□□□□ 0.11
PTCHD3-202ENST00000622555 TRGV8A0A0C4DH27 118 aa15.71■□□□□ 0.1
PTCHD3-202ENST00000622555 ZNF587BE7ETH6 402 aa15.71■□□□□ 0.1
PTCHD3-202ENST00000622555 CEACAM8P31997 349 aaPredicted RBP15.71■□□□□ 0.1
PTCHD3-202ENST00000622555 GUCA1AP43080 201 aaPredicted RBP15.71■□□□□ 0.1
PTCHD3-202ENST00000622555 TMBIM6P55061 237 aa15.71■□□□□ 0.1
PTCHD3-202ENST00000622555 ADAM8P78325 824 aa15.71■□□□□ 0.1
PTCHD3-202ENST00000622555 PMPCAQ10713 525 aa15.71■□□□□ 0.1
PTCHD3-202ENST00000622555 CEACAM16Q2WEN9 425 aa15.71■□□□□ 0.1
PTCHD3-202ENST00000622555 SLC16A9Q7RTY1 509 aa15.71■□□□□ 0.1
PTCHD3-202ENST00000622555 SLC35F2Q8IXU6 374 aa15.71■□□□□ 0.1
PTCHD3-202ENST00000622555 NAXEQ8NCW5 288 aa15.71■□□□□ 0.1
PTCHD3-202ENST00000622555 OR6N2Q8NGY6 317 aa15.71■□□□□ 0.1
PTCHD3-202ENST00000622555 TAS2R16Q9NYV7 291 aa15.71■□□□□ 0.1
PTCHD3-202ENST00000622555 NBASA2RRP1 2371 aa15.7■□□□□ 0.1
PTCHD3-202ENST00000622555 J3QRE1 110 aa15.7■□□□□ 0.1
PTCHD3-202ENST00000622555 TNFSF13O75888 250 aa15.7■□□□□ 0.1
PTCHD3-202ENST00000622555 ZNF823P16415 610 aa15.7■□□□□ 0.1
PTCHD3-202ENST00000622555 MYL12AP19105 171 aa15.7■□□□□ 0.1
PTCHD3-202ENST00000622555 HCCSP53701 268 aa15.7■□□□□ 0.1
PTCHD3-202ENST00000622555 FAPQ12884 760 aa15.7■□□□□ 0.1
PTCHD3-202ENST00000622555 GPR107Q5VW38 600 aa15.7■□□□□ 0.1
PTCHD3-202ENST00000622555 FBXW9Q5XUX1 488 aa15.7■□□□□ 0.1
PTCHD3-202ENST00000622555 TFAP2EQ6VUC0 442 aa15.7■□□□□ 0.1
PTCHD3-202ENST00000622555 OR10H5Q8NGA6 315 aa15.7■□□□□ 0.1
PTCHD3-202ENST00000622555 C11orf40Q8WZ69 217 aa15.7■□□□□ 0.1
PTCHD3-202ENST00000622555 HTRA1Q92743 480 aa15.7■□□□□ 0.1
PTCHD3-202ENST00000622555 OSGIN2Q9Y236 505 aa15.7■□□□□ 0.1
PTCHD3-202ENST00000622555 C12orf71A8MTZ7 269 aa15.69■□□□□ 0.1
PTCHD3-202ENST00000622555 H3BMQ9 156 aa15.69■□□□□ 0.1
PTCHD3-202ENST00000622555 ZNF593O00488 134 aaPredicted RBP15.69■□□□□ 0.1
PTCHD3-202ENST00000622555 IGHA1P01876 353 aa15.69■□□□□ 0.1
PTCHD3-202ENST00000622555 HRGP04196 525 aa15.69■□□□□ 0.1
PTCHD3-202ENST00000622555 ENTPD1P49961 510 aa15.69■□□□□ 0.1
PTCHD3-202ENST00000622555 ACTC1P68032 377 aa15.69■□□□□ 0.1
PTCHD3-202ENST00000622555 ACTA1P68133 377 aa15.69■□□□□ 0.1
PTCHD3-202ENST00000622555 EMX1Q04741 257 aaPredicted RBP15.69■□□□□ 0.1
PTCHD3-202ENST00000622555 SGCAQ16586 387 aa15.69■□□□□ 0.1
PTCHD3-202ENST00000622555 ABHD12BQ7Z5M8 362 aaPredicted RBP15.69■□□□□ 0.1
PTCHD3-202ENST00000622555 BTLAQ7Z6A9 289 aa15.69■□□□□ 0.1
PTCHD3-202ENST00000622555 ACBD7Q8N6N7 88 aa15.69■□□□□ 0.1
PTCHD3-202ENST00000622555 COG8Q96MW5 612 aa15.69■□□□□ 0.1
PTCHD3-202ENST00000622555 CDCA4Q9BXL8 241 aa15.69■□□□□ 0.1
PTCHD3-202ENST00000622555 EMC7Q9NPA0 242 aa15.69■□□□□ 0.1
PTCHD3-202ENST00000622555 POLE4Q9NR33 117 aa15.69■□□□□ 0.1
PTCHD3-202ENST00000622555 CHCHD3Q9NX63 227 aaKnown RBP15.69■□□□□ 0.1
PTCHD3-202ENST00000622555 MALT1Q9UDY8 824 aa15.69■□□□□ 0.1
PTCHD3-202ENST00000622555 PROCRQ9UNN8 238 aa15.69■□□□□ 0.1
PTCHD3-202ENST00000622555 EXOSC1Q9Y3B2 195 aaKnown RBP15.69■□□□□ 0.1
PTCHD3-202ENST00000622555 CACNA1CQ13936 2221 aa15.69■□□□□ 0.1
PTCHD3-202ENST00000622555 DAPL1A0PJW8 107 aa15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 E9PLN8 166 aa15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 RPL36A-HNRNPH2H7BZ11 118 aa15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 SCG5P05408 212 aa15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 SPARCP09486 303 aa15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 OR2T7P0C7T2 308 aa15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 CTSSP25774 331 aa15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 RPS27P42677 84 aaKnown RBP15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 CA7P43166 264 aa15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 MAP2K4P45985 399 aa15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 ETV1P50549 477 aa15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 DYNC1I2Q13409 638 aaKnown RBP15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 C9orf135Q5VTT2 229 aa15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 FOXL2NBQ6ZUU3 175 aa15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 DPY19L4Q7Z388 723 aa15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 SVOPQ8N4V2 548 aa15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 OR2T27Q8NH04 317 aa15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 STARD4Q96DR4 205 aa15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 FOXB1Q99853 325 aa15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 VKORC1Q9BQB6 163 aa15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 SFXN3Q9BWM7 321 aa15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 NAA50Q9GZZ1 169 aaKnown RBP15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 NELFAQ9H3P2 528 aa15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 SLC24A3Q9HC58 644 aa15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 POLR1DQ9Y2S0 133 aa15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 NCOA6Q14686 2063 aaPredicted RBP15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 A0A1W2PQL4 384 aaPredicted RBP15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 ATE1O95260 518 aa15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 PSKH1P11801 424 aa15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 MSR1P21757 451 aa15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 GP2P55259 537 aaKnown RBP15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 MRPS34P82930 218 aaKnown RBP15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 MRPL49Q13405 166 aaKnown RBP15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 MYO7BQ6PIF6 2116 aa15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 NCCRP1Q6ZVX7 275 aaPredicted RBP15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 LHFPL3Q86UP9 236 aa15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 CDC20BQ86Y33 519 aa15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 CDADC1Q9BWV3 514 aa15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 JAM3Q9BX67 310 aa15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 PLSCR4Q9NRQ2 329 aa15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 INPP5EQ9NRR6 644 aa15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 TMEM38BQ9NVV0 291 aa15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 ERVK13-1Q9NX77 482 aa15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 CLEC2DQ9UHP7 191 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms