RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 TEX13DA0A0J9YY54 714 aaPredicted RBP7.21□□□□□ -1.26
VPS11-209ENST00000622309 IFITM5A6NNB3 132 aa7.21□□□□□ -1.26
VPS11-209ENST00000622309 CDRT15L2A8MXV6 281 aa7.21□□□□□ -1.26
VPS11-209ENST00000622309 RPL36A-HNRNPH2H7BZ11 118 aa7.21□□□□□ -1.26
VPS11-209ENST00000622309 H7C417 338 aa7.21□□□□□ -1.26
VPS11-209ENST00000622309 PIRO00625 290 aa7.21□□□□□ -1.26
VPS11-209ENST00000622309 EFSO43281 561 aa7.21□□□□□ -1.26
VPS11-209ENST00000622309 B3GAT3O94766 335 aa7.21□□□□□ -1.26
VPS11-209ENST00000622309 RPN2P04844 631 aa7.21□□□□□ -1.26
VPS11-209ENST00000622309 NT5EP21589 574 aa7.21□□□□□ -1.26
VPS11-209ENST00000622309 CTGFP29279 349 aa7.21□□□□□ -1.26
VPS11-209ENST00000622309 APLNRP35414 380 aa7.21□□□□□ -1.26
VPS11-209ENST00000622309 GPR4P46093 362 aa7.21□□□□□ -1.26
VPS11-209ENST00000622309 CSNK1DP48730 415 aa7.21□□□□□ -1.26
VPS11-209ENST00000622309 OR12D2P58182 307 aa7.21□□□□□ -1.26
VPS11-209ENST00000622309 TLE4Q04727 773 aa7.21□□□□□ -1.26
VPS11-209ENST00000622309 CLDN19Q8N6F1 224 aa7.21□□□□□ -1.26
VPS11-209ENST00000622309 ZNF615Q8N8J6 731 aa7.21□□□□□ -1.26
VPS11-209ENST00000622309 CLP1Q92989 425 aaKnown RBP7.21□□□□□ -1.26
VPS11-209ENST00000622309 FAM46AQ96IP4 442 aaKnown RBP7.21□□□□□ -1.26
VPS11-209ENST00000622309 KCNJ16Q9NPI9 418 aa7.21□□□□□ -1.26
VPS11-209ENST00000622309 HINT3Q9NQE9 182 aaKnown RBP7.21□□□□□ -1.26
VPS11-209ENST00000622309 CBLN4Q9NTU7 201 aa7.21□□□□□ -1.26
VPS11-209ENST00000622309 MTFP1Q9UDX5 166 aa7.21□□□□□ -1.26
VPS11-209ENST00000622309 ZNF223Q9UK11 482 aaPredicted RBP7.21□□□□□ -1.26
VPS11-209ENST00000622309 FBXO4Q9UKT5 387 aa7.21□□□□□ -1.26
VPS11-209ENST00000622309 CSAG2Q9Y5P2 127 aa7.21□□□□□ -1.26
VPS11-209ENST00000622309 A0A1B0GTI1 187 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 ZC3H12DA2A288 527 aaKnown RBP7.2□□□□□ -1.26
VPS11-209ENST00000622309 C5orf51A6NDU8 294 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 ZNF724A8MTY0 619 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 DVL1O14640 695 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 SIAH2O43255 324 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 LRP3O75074 770 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 NSA2O95478 260 aaKnown RBP7.2□□□□□ -1.26
VPS11-209ENST00000622309 TSPAN15O95858 294 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 HLA-AP01891 365 aaKnown RBP7.2□□□□□ -1.26
VPS11-209ENST00000622309 MRPL3P09001 348 aaKnown RBP7.2□□□□□ -1.26
VPS11-209ENST00000622309 ITPKBP27987 946 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 OR3A1P47881 315 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 NFATC2Q13469 925 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 HIKESHIQ53FT3 197 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 ZNF311Q5JNZ3 666 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 MORN1Q5T089 497 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 C5orf24Q7Z6I8 188 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 OR13C3Q8NGS6 347 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 RAB8BQ92930 207 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 HAVCR1Q96D42 359 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 OR14A2Q96R54 314 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 TCEAL2Q9H3H9 227 aaPredicted RBP7.2□□□□□ -1.26
VPS11-209ENST00000622309 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.2□□□□□ -1.26
VPS11-209ENST00000622309 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.2□□□□□ -1.26
VPS11-209ENST00000622309 MBLAC1A4D2B0 266 aaPredicted RBP7.2□□□□□ -1.26
VPS11-209ENST00000622309 MEIS3P1A6NDR6 274 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 TP53I11O14683 189 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 GUSBP08236 651 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 HKR1P10072 659 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 MAS1LP35410 378 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 THBS4P35443 961 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 TSTA3Q13630 321 aaPredicted RBP7.2□□□□□ -1.26
VPS11-209ENST00000622309 PGGHGQ32M88 737 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 C2orf27AQ580R0 203 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 LRRC73Q5JTD7 316 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 MEPCEQ7L2J0 689 aaKnown RBP7.2□□□□□ -1.26
VPS11-209ENST00000622309 TOP6BLQ8N6T0 577 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 OR10A7Q8NGE5 316 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 LKAAEAR1Q8TD35 194 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 DVL3Q92997 716 aaPredicted RBP7.2□□□□□ -1.26
VPS11-209ENST00000622309 TAAR8Q969N4 342 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 CCDC74AQ96AQ1 378 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 NTNG2Q96CW9 530 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 CXorf40BQ96DE9 158 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 PPP1R16AQ96I34 528 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 PGLYRP3Q96LB9 341 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 WFDC6Q9BQY6 131 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 SLC25A18Q9H1K4 315 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 SSUH2Q9Y2M2 353 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 TSC2P49815 1807 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 A0A087WUJ7 227 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 C13orf42A0A1B0GVH6 325 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 TVP23AA6NH52 213 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 M0R296 226 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 DFFBO76075 338 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 PPP1R3DO95685 299 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 OR4Q2P0C623 313 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 GZMBP10144 247 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 DPP4P27487 766 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 PSMB6P28072 239 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 CD52P31358 61 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 IGFALSP35858 605 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 THPOP40225 353 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 PRRX1P54821 245 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 TAS2R41P59536 307 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 RPS23P62266 143 aaKnown RBP7.2□□□□□ -1.26
VPS11-209ENST00000622309 RBX1P62877 108 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 TGM3Q08188 693 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 DHRS2Q13268 280 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 PNLIPRP3Q17RR3 467 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 RIPPLY2Q5TAB7 128 aa7.2□□□□□ -1.26
VPS11-209ENST00000622309 DMKNQ6E0U4 476 aaPredicted RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms