RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 CSNK1A1P48729 337 aa16.47■□□□□ 0.23
SEMA6C-210ENST00000621728 SLC25A47Q6Q0C1 308 aa16.47■□□□□ 0.23
SEMA6C-210ENST00000621728 AAED1Q7RTV5 226 aa16.47■□□□□ 0.23
SEMA6C-210ENST00000621728 SLC16A9Q7RTY1 509 aa16.47■□□□□ 0.23
SEMA6C-210ENST00000621728 TUSC5Q8IXB3 177 aa16.47■□□□□ 0.23
SEMA6C-210ENST00000621728 ZNF485Q8NCK3 441 aa16.47■□□□□ 0.23
SEMA6C-210ENST00000621728 OR6N1Q8NGY5 312 aa16.47■□□□□ 0.23
SEMA6C-210ENST00000621728 SPRYD4Q8WW59 207 aaPredicted RBP16.47■□□□□ 0.23
SEMA6C-210ENST00000621728 TMEM54Q969K7 222 aa16.47■□□□□ 0.23
SEMA6C-210ENST00000621728 PNPLA2Q96AD5 504 aa16.47■□□□□ 0.23
SEMA6C-210ENST00000621728 OPALINQ96PE5 141 aa16.47■□□□□ 0.23
SEMA6C-210ENST00000621728 INTS14Q96SY0 518 aa16.47■□□□□ 0.23
SEMA6C-210ENST00000621728 GLTPQ9NZD2 209 aa16.47■□□□□ 0.23
SEMA6C-210ENST00000621728 PNMA8CA0A1B0GUJ8 204 aa16.47■□□□□ 0.23
SEMA6C-210ENST00000621728 TMEM129A0AVI4 362 aa16.47■□□□□ 0.23
SEMA6C-210ENST00000621728 PSMD9O00233 223 aa16.47■□□□□ 0.23
SEMA6C-210ENST00000621728 LRRTM2O43300 516 aa16.47■□□□□ 0.23
SEMA6C-210ENST00000621728 GAAP10253 952 aa16.47■□□□□ 0.23
SEMA6C-210ENST00000621728 BCAP31P51572 246 aa16.47■□□□□ 0.23
SEMA6C-210ENST00000621728 WNT4P56705 351 aa16.47■□□□□ 0.23
SEMA6C-210ENST00000621728 GALEQ14376 348 aa16.47■□□□□ 0.23
SEMA6C-210ENST00000621728 ZNF181Q2M3W8 571 aa16.47■□□□□ 0.23
SEMA6C-210ENST00000621728 PRR30Q53SZ7 412 aaPredicted RBP16.47■□□□□ 0.23
SEMA6C-210ENST00000621728 THEM4Q5T1C6 240 aa16.47■□□□□ 0.23
SEMA6C-210ENST00000621728 DPY19L4Q7Z388 723 aa16.47■□□□□ 0.23
SEMA6C-210ENST00000621728 HDDC2Q7Z4H3 204 aa16.47■□□□□ 0.23
SEMA6C-210ENST00000621728 ATCAYQ86WG3 371 aa16.47■□□□□ 0.23
SEMA6C-210ENST00000621728 KLHL36Q8N4N3 616 aa16.47■□□□□ 0.23
SEMA6C-210ENST00000621728 CISD2Q8N5K1 135 aaKnown RBP16.47■□□□□ 0.23
SEMA6C-210ENST00000621728 ZFP41Q8N8Y5 198 aa16.47■□□□□ 0.23
SEMA6C-210ENST00000621728 MARCH7Q9H992 704 aa16.47■□□□□ 0.23
SEMA6C-210ENST00000621728 CALHM2Q9HA72 323 aa16.47■□□□□ 0.23
SEMA6C-210ENST00000621728 ISYNA1Q9NPH2 558 aa16.47■□□□□ 0.23
SEMA6C-210ENST00000621728 RHBDL2Q9NX52 303 aa16.47■□□□□ 0.23
SEMA6C-210ENST00000621728 PAQR5Q9NXK6 330 aaPredicted RBP16.47■□□□□ 0.23
SEMA6C-210ENST00000621728 DAPK2Q9UIK4 370 aa16.47■□□□□ 0.23
SEMA6C-210ENST00000621728 A0A1W2PPL8 197 aa16.46■□□□□ 0.23
SEMA6C-210ENST00000621728 FUOMA2VDF0 154 aa16.46■□□□□ 0.23
SEMA6C-210ENST00000621728 UPK3AO75631 287 aa16.46■□□□□ 0.23
SEMA6C-210ENST00000621728 HNRNPCP07910 306 aaKnown RBP eCLIP16.46■□□□□ 0.23
SEMA6C-210ENST00000621728 OR2T7P0C7T2 308 aa16.46■□□□□ 0.23
SEMA6C-210ENST00000621728 ETV6P41212 452 aa16.46■□□□□ 0.23
SEMA6C-210ENST00000621728 MLLT11Q13015 90 aaPredicted RBP16.46■□□□□ 0.23
SEMA6C-210ENST00000621728 TSTQ16762 297 aaKnown RBP16.46■□□□□ 0.23
SEMA6C-210ENST00000621728 DNM1P34Q6PK57 102 aa16.46■□□□□ 0.23
SEMA6C-210ENST00000621728 ZNF322Q6U7Q0 402 aaPredicted RBP16.46■□□□□ 0.23
SEMA6C-210ENST00000621728 SLC26A10Q8NG04 563 aa16.46■□□□□ 0.23
SEMA6C-210ENST00000621728 OR2T27Q8NH04 317 aa16.46■□□□□ 0.23
SEMA6C-210ENST00000621728 ZNF837Q96EG3 531 aaPredicted RBP16.46■□□□□ 0.23
SEMA6C-210ENST00000621728 AMELYQ99218 206 aa16.46■□□□□ 0.23
SEMA6C-210ENST00000621728 KCNG2Q9UJ96 466 aa16.46■□□□□ 0.23
SEMA6C-210ENST00000621728 FOXD3Q9UJU5 478 aaPredicted RBP16.46■□□□□ 0.23
SEMA6C-210ENST00000621728 TLN1Q9Y490 2541 aaKnown RBP16.46■□□□□ 0.23
SEMA6C-210ENST00000621728 A0A075B6Q4 140 aa16.45■□□□□ 0.22
SEMA6C-210ENST00000621728 IGKV3D-15A0A087WSY6 115 aa16.45■□□□□ 0.22
SEMA6C-210ENST00000621728 SLC22A20A6NK97 555 aa16.45■□□□□ 0.22
SEMA6C-210ENST00000621728 ZNF593O00488 134 aaPredicted RBP16.45■□□□□ 0.22
SEMA6C-210ENST00000621728 CRYABP02511 175 aaKnown RBP16.45■□□□□ 0.22
SEMA6C-210ENST00000621728 OR12D2P58182 307 aa16.45■□□□□ 0.22
SEMA6C-210ENST00000621728 GLO1Q04760 184 aa16.45■□□□□ 0.22
SEMA6C-210ENST00000621728 TP53I3Q53FA7 332 aa16.45■□□□□ 0.22
SEMA6C-210ENST00000621728 FAM180AQ6UWF9 173 aa16.45■□□□□ 0.22
SEMA6C-210ENST00000621728 LINGO2Q7L985 606 aa16.45■□□□□ 0.22
SEMA6C-210ENST00000621728 CDC20BQ86Y33 519 aa16.45■□□□□ 0.22
SEMA6C-210ENST00000621728 MED12LQ86YW9 2145 aa16.45■□□□□ 0.22
SEMA6C-210ENST00000621728 C20orf196Q8IYI0 205 aa16.45■□□□□ 0.22
SEMA6C-210ENST00000621728 SARAFQ96BY9 339 aa16.45■□□□□ 0.22
SEMA6C-210ENST00000621728 GPR137Q96N19 417 aa16.45■□□□□ 0.22
SEMA6C-210ENST00000621728 TRIB1Q96RU8 372 aa16.45■□□□□ 0.22
SEMA6C-210ENST00000621728 OR51E2Q9H255 320 aa16.45■□□□□ 0.22
SEMA6C-210ENST00000621728 SEC61A2Q9H9S3 476 aa16.45■□□□□ 0.22
SEMA6C-210ENST00000621728 KLHL9Q9P2J3 617 aa16.45■□□□□ 0.22
SEMA6C-210ENST00000621728 WNT11O96014 354 aa16.45■□□□□ 0.22
SEMA6C-210ENST00000621728 IGHV3-9P01782 118 aa16.45■□□□□ 0.22
SEMA6C-210ENST00000621728 SPARCP09486 303 aa16.45■□□□□ 0.22
SEMA6C-210ENST00000621728 ACTC1P68032 377 aa16.45■□□□□ 0.22
SEMA6C-210ENST00000621728 ACTA1P68133 377 aa16.45■□□□□ 0.22
SEMA6C-210ENST00000621728 ADAM8P78325 824 aa16.45■□□□□ 0.22
SEMA6C-210ENST00000621728 KLBQ86Z14 1044 aa16.45■□□□□ 0.22
SEMA6C-210ENST00000621728 GLB1L2Q8IW92 636 aa16.45■□□□□ 0.22
SEMA6C-210ENST00000621728 C11orf40Q8WZ69 217 aa16.45■□□□□ 0.22
SEMA6C-210ENST00000621728 C4orf36Q96KX1 117 aa16.45■□□□□ 0.22
SEMA6C-210ENST00000621728 CDADC1Q9BWV3 514 aa16.45■□□□□ 0.22
SEMA6C-210ENST00000621728 EMC7Q9NPA0 242 aa16.45■□□□□ 0.22
SEMA6C-210ENST00000621728 CRNNQ9UBG3 495 aaPredicted RBP16.45■□□□□ 0.22
SEMA6C-210ENST00000621728 RCE1Q9Y256 329 aa16.45■□□□□ 0.22
SEMA6C-210ENST00000621728 NOSIPQ9Y314 301 aaKnown RBP16.45■□□□□ 0.22
SEMA6C-210ENST00000621728 GTF3C1Q12789 2109 aa16.44■□□□□ 0.22
SEMA6C-210ENST00000621728 FREM1Q5H8C1 2179 aa16.44■□□□□ 0.22
SEMA6C-210ENST00000621728 LOC100506127A0A0U1RQW1 187 aa16.44■□□□□ 0.22
SEMA6C-210ENST00000621728 E9PI62 339 aa16.44■□□□□ 0.22
SEMA6C-210ENST00000621728 J3QLW9 94 aa16.44■□□□□ 0.22
SEMA6C-210ENST00000621728 SLC43A1O75387 559 aa16.44■□□□□ 0.22
SEMA6C-210ENST00000621728 ZNF19P17023 458 aa16.44■□□□□ 0.22
SEMA6C-210ENST00000621728 PSMA1P25786 263 aaKnown RBP16.44■□□□□ 0.22
SEMA6C-210ENST00000621728 HSF2Q03933 536 aa16.44■□□□□ 0.22
SEMA6C-210ENST00000621728 SSX1Q16384 188 aa16.44■□□□□ 0.22
SEMA6C-210ENST00000621728 ZNF324BQ6AW86 544 aaPredicted RBP16.44■□□□□ 0.22
SEMA6C-210ENST00000621728 PLEKHG7Q6ZR37 379 aa16.44■□□□□ 0.22
SEMA6C-210ENST00000621728 NUFIP2Q7Z417 695 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms