RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 RAP1BP61224 184 aa14.69□□□□□ -0.06
HMGN3-203ENST00000620514 RAP1AP62834 184 aa14.69□□□□□ -0.06
HMGN3-203ENST00000620514 PSG4Q00888 419 aa14.69□□□□□ -0.06
HMGN3-203ENST00000620514 NKPD1Q17RQ9 610 aa14.69□□□□□ -0.06
HMGN3-203ENST00000620514 FAM27BQ5VT28 67 aa14.69□□□□□ -0.06
HMGN3-203ENST00000620514 FAM205BPQ63HN1 556 aa14.69□□□□□ -0.06
HMGN3-203ENST00000620514 GLYATQ6IB77 296 aa14.69□□□□□ -0.06
HMGN3-203ENST00000620514 CYP4Z1Q86W10 505 aa14.69□□□□□ -0.06
HMGN3-203ENST00000620514 FAM156AQ8NDB6 213 aa14.69□□□□□ -0.06
HMGN3-203ENST00000620514 SYNPRQ8TBG9 265 aa14.69□□□□□ -0.06
HMGN3-203ENST00000620514 GTF3AQ92664 365 aaKnown RBP14.69□□□□□ -0.06
HMGN3-203ENST00000620514 YIPF5Q969M3 257 aa14.69□□□□□ -0.06
HMGN3-203ENST00000620514 FAM46AQ96IP4 442 aaKnown RBP14.69□□□□□ -0.06
HMGN3-203ENST00000620514 POM121L2Q96KW2 1035 aa14.69□□□□□ -0.06
HMGN3-203ENST00000620514 SHARPINQ9H0F6 387 aa14.69□□□□□ -0.06
HMGN3-203ENST00000620514 WNT5BQ9H1J7 359 aa14.69□□□□□ -0.06
HMGN3-203ENST00000620514 LRMDAQ9H2I8 198 aa14.69□□□□□ -0.06
HMGN3-203ENST00000620514 ADA2Q9NZK5 511 aa14.69□□□□□ -0.06
HMGN3-203ENST00000620514 RPS6KA6Q9UK32 745 aa14.69□□□□□ -0.06
HMGN3-203ENST00000620514 ADAM18Q9Y3Q7 739 aa14.69□□□□□ -0.06
HMGN3-203ENST00000620514 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.68□□□□□ -0.063e-6■□□□□ 10.7
HMGN3-203ENST00000620514 A0A1W2PPL8 197 aa14.68□□□□□ -0.06
HMGN3-203ENST00000620514 GMNCA6NCL1 334 aa14.68□□□□□ -0.06
HMGN3-203ENST00000620514 DIRAS1O95057 198 aa14.68□□□□□ -0.06
HMGN3-203ENST00000620514 RPL4P36578 427 aaKnown RBP14.68□□□□□ -0.06
HMGN3-203ENST00000620514 WNT5AP41221 380 aa14.68□□□□□ -0.06
HMGN3-203ENST00000620514 RAD52P43351 418 aa14.68□□□□□ -0.06
HMGN3-203ENST00000620514 GYS2P54840 703 aa14.68□□□□□ -0.06
HMGN3-203ENST00000620514 KLF3P57682 345 aaPredicted RBP14.68□□□□□ -0.06
HMGN3-203ENST00000620514 CCNIQ14094 377 aa14.68□□□□□ -0.06
HMGN3-203ENST00000620514 ANKDD1AQ495B1 522 aa14.68□□□□□ -0.06
HMGN3-203ENST00000620514 ZBED5Q49AG3 693 aa14.68□□□□□ -0.06
HMGN3-203ENST00000620514 FOXL2NBQ6ZUU3 175 aa14.68□□□□□ -0.06
HMGN3-203ENST00000620514 TMPRSS11FQ6ZWK6 438 aa14.68□□□□□ -0.06
HMGN3-203ENST00000620514 ZNF101Q8IZC7 436 aa14.68□□□□□ -0.06
HMGN3-203ENST00000620514 OR1J1Q8NGS3 322 aa14.68□□□□□ -0.06
HMGN3-203ENST00000620514 C11orf40Q8WZ69 217 aa14.68□□□□□ -0.06
HMGN3-203ENST00000620514 RDH5Q92781 318 aa14.68□□□□□ -0.06
HMGN3-203ENST00000620514 C7orf34Q96L11 122 aa14.68□□□□□ -0.06
HMGN3-203ENST00000620514 Q96M85 177 aa14.68□□□□□ -0.06
HMGN3-203ENST00000620514 BCL2L14Q9BZR8 327 aa14.68□□□□□ -0.06
HMGN3-203ENST00000620514 OR2H1Q9GZK4 316 aa14.68□□□□□ -0.06
HMGN3-203ENST00000620514 ANKRD19PQ9H560 264 aa14.68□□□□□ -0.06
HMGN3-203ENST00000620514 SPAG4Q9NPE6 437 aa14.68□□□□□ -0.06
HMGN3-203ENST00000620514 HINT3Q9NQE9 182 aaKnown RBP14.68□□□□□ -0.06
HMGN3-203ENST00000620514 NDUFAF4Q9P032 175 aa14.68□□□□□ -0.06
HMGN3-203ENST00000620514 LPAR3Q9UBY5 353 aa14.68□□□□□ -0.06
HMGN3-203ENST00000620514 COL6A5A8TX70 2615 aa14.68□□□□□ -0.06
HMGN3-203ENST00000620514 C5orf49A4QMS7 147 aa14.67□□□□□ -0.06
HMGN3-203ENST00000620514 H1F0P07305 194 aaKnown RBP14.67□□□□□ -0.06
HMGN3-203ENST00000620514 CD14P08571 375 aa14.67□□□□□ -0.06
HMGN3-203ENST00000620514 CST2P09228 141 aa14.67□□□□□ -0.06
HMGN3-203ENST00000620514 SELENOVP59797 346 aa14.67□□□□□ -0.06
HMGN3-203ENST00000620514 GLO1Q04760 184 aa14.67□□□□□ -0.06
HMGN3-203ENST00000620514 ENDOGQ14249 297 aaKnown RBP14.67□□□□□ -0.06
HMGN3-203ENST00000620514 MESTQ5EB52 335 aa14.67□□□□□ -0.06
HMGN3-203ENST00000620514 TMEM255AQ5JRV8 349 aa14.67□□□□□ -0.06
HMGN3-203ENST00000620514 FGD3Q5JSP0 725 aa14.67□□□□□ -0.06
HMGN3-203ENST00000620514 FAM120AOSQ5T036 256 aa14.67□□□□□ -0.06
HMGN3-203ENST00000620514 SPATA46Q5T0L3 261 aa14.67□□□□□ -0.06
HMGN3-203ENST00000620514 UGT2A3Q6UWM9 527 aa14.67□□□□□ -0.06
HMGN3-203ENST00000620514 RRM2BQ7LG56 351 aa14.67□□□□□ -0.06
HMGN3-203ENST00000620514 FNDC8Q8TC99 324 aa14.67□□□□□ -0.06
HMGN3-203ENST00000620514 ZNF275Q9NSD4 429 aaPredicted RBP14.67□□□□□ -0.06
HMGN3-203ENST00000620514 DCAF13Q9NV06 445 aaKnown RBP14.67□□□□□ -0.06
HMGN3-203ENST00000620514 GRHPRQ9UBQ7 328 aa14.67□□□□□ -0.06
HMGN3-203ENST00000620514 FAM32AQ9Y421 112 aaKnown RBP14.67□□□□□ -0.06
HMGN3-203ENST00000620514 V9GYQ6 96 aa14.67□□□□□ -0.06
HMGN3-203ENST00000620514 TRBV4-1A0A0J9YWV2 114 aa14.66□□□□□ -0.06
HMGN3-203ENST00000620514 A0A1W2PRQ8 180 aa14.66□□□□□ -0.06
HMGN3-203ENST00000620514 C17orf100A8MU93 164 aa14.66□□□□□ -0.06
HMGN3-203ENST00000620514 WNT9BO14905 357 aa14.66□□□□□ -0.06
HMGN3-203ENST00000620514 PTP4A3O75365 173 aa14.66□□□□□ -0.06
HMGN3-203ENST00000620514 ACHEP22303 614 aa14.66□□□□□ -0.06
HMGN3-203ENST00000620514 MPV17P39210 176 aa14.66□□□□□ -0.06
HMGN3-203ENST00000620514 GPR6P46095 362 aaPredicted RBP14.66□□□□□ -0.06
HMGN3-203ENST00000620514 OMPP47874 163 aa14.66□□□□□ -0.06
HMGN3-203ENST00000620514 LIMS1P48059 325 aa14.66□□□□□ -0.06
HMGN3-203ENST00000620514 GDI2P50395 445 aaKnown RBP14.66□□□□□ -0.06
HMGN3-203ENST00000620514 DGCR6Q14129 220 aa14.66□□□□□ -0.06
HMGN3-203ENST00000620514 SEC23BQ15437 767 aa14.66□□□□□ -0.06
HMGN3-203ENST00000620514 ZNF774Q6NX45 483 aa14.66□□□□□ -0.06
HMGN3-203ENST00000620514 FAM122BQ7Z309 247 aa14.66□□□□□ -0.06
HMGN3-203ENST00000620514 CPLX4Q7Z7G2 160 aa14.66□□□□□ -0.06
HMGN3-203ENST00000620514 HPS1Q92902 700 aa14.66□□□□□ -0.06
HMGN3-203ENST00000620514 RASD2Q96D21 266 aa14.66□□□□□ -0.06
HMGN3-203ENST00000620514 ZNF416Q9BWM5 594 aa14.66□□□□□ -0.06
HMGN3-203ENST00000620514 NSRP1Q9H0G5 558 aaKnown RBP14.66□□□□□ -0.06
HMGN3-203ENST00000620514 NARFLQ9H6Q4 476 aa14.66□□□□□ -0.06
HMGN3-203ENST00000620514 EMC7Q9NPA0 242 aa14.66□□□□□ -0.06
HMGN3-203ENST00000620514 POLE4Q9NR33 117 aa14.66□□□□□ -0.06
HMGN3-203ENST00000620514 TMEM5Q9Y2B1 443 aa14.66□□□□□ -0.06
HMGN3-203ENST00000620514 TIMM10BQ9Y5J6 103 aa14.66□□□□□ -0.06
HMGN3-203ENST00000620514 TEX13CA0A0J9YWL9 993 aa14.65□□□□□ -0.06
HMGN3-203ENST00000620514 RNF212BA8MTL3 300 aa14.65□□□□□ -0.06
HMGN3-203ENST00000620514 IMPA2O14732 288 aa14.65□□□□□ -0.06
HMGN3-203ENST00000620514 CDC14BO60729 498 aa14.65□□□□□ -0.06
HMGN3-203ENST00000620514 RP2O75695 350 aa14.65□□□□□ -0.06
HMGN3-203ENST00000620514 RHCEP18577 417 aa14.65□□□□□ -0.06
HMGN3-203ENST00000620514 MSR1P21757 451 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms