RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 B8ZZF3 427 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 ZNF587BE7ETH6 402 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 WIPF1O43516 503 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 SELENOFO60613 162 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 TMCC2O75069 709 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 APOL3O95236 402 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 RAB36O95755 333 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 HTR1AP08908 422 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 ADRA2AP08913 450 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 OR2T7P0C7T2 308 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 GAAP10253 952 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 NPR2P20594 1047 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 MPGP29372 298 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 CDAP32320 146 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 HCCSP53701 268 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 LSM6P62312 80 aaKnown RBP7.06□□□□□ -1.28
CPNE3-209ENST00000620393 TUBA4AP68366 448 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 MVKQ03426 396 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 FAPQ12884 760 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 IRF3Q14653 427 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 SGCAQ16586 387 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 PCK2Q16822 640 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 NRN1LQ496H8 165 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 FAM27BQ5VT28 67 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 ZNF773Q6PK81 442 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 Q6ZT83 130 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 ZNF627Q7L945 461 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 SHFQ7M4L6 423 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 ATCAYQ86WG3 371 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 ERI1Q8IV48 349 aaKnown RBP7.06□□□□□ -1.28
CPNE3-209ENST00000620393 SPARTQ8N0X7 666 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 ACBD7Q8N6N7 88 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 ZNF610Q8N9Z0 462 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 GALNT11Q8NCW6 608 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 OR2T27Q8NH04 317 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 SMAP2Q8WU79 429 aaPredicted RBP7.06□□□□□ -1.28
CPNE3-209ENST00000620393 RND1Q92730 232 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 ITPKCQ96DU7 683 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 FOXN4Q96NZ1 517 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 INTS14Q96SY0 518 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 CNN2Q99439 309 aaKnown RBP7.06□□□□□ -1.28
CPNE3-209ENST00000620393 ZNF649Q9BS31 505 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 CDADC1Q9BWV3 514 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 JAM3Q9BX67 310 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 CCDC90BQ9GZT6 254 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 ZFAND3Q9H8U3 227 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 SIAEQ9HAT2 523 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 POLE4Q9NR33 117 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 INPP5EQ9NRR6 644 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 TMEM38BQ9NVV0 291 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 CHCHD3Q9NX63 227 aaKnown RBP7.06□□□□□ -1.28
CPNE3-209ENST00000620393 MALT1Q9UDY8 824 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 ZNF629Q9UEG4 869 aaPredicted RBP7.06□□□□□ -1.28
CPNE3-209ENST00000620393 Q9UFV3 132 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 KCNG2Q9UJ96 466 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 SH3BGRL2Q9UJC5 107 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 COMMD3-BMI1R4GMX3 469 aa7.06□□□□□ -1.28
CPNE3-209ENST00000620393 A0A1B0GUH1 482 aa7.05□□□□□ -1.28
CPNE3-209ENST00000620393 A0A1W2PPL8 197 aa7.05□□□□□ -1.28
CPNE3-209ENST00000620393 A0A1W2PQL4 384 aaPredicted RBP7.05□□□□□ -1.28
CPNE3-209ENST00000620393 DAPL1A0PJW8 107 aa7.05□□□□□ -1.28
CPNE3-209ENST00000620393 C12orf71A8MTZ7 269 aa7.05□□□□□ -1.28
CPNE3-209ENST00000620393 ZNF99A8MXY4 864 aaPredicted RBP7.05□□□□□ -1.28
CPNE3-209ENST00000620393 CCL21O00585 134 aa7.05□□□□□ -1.28
CPNE3-209ENST00000620393 MSTNO14793 375 aa7.05□□□□□ -1.28
CPNE3-209ENST00000620393 IGHA1P01876 353 aa7.05□□□□□ -1.28
CPNE3-209ENST00000620393 MT-ND2P03891 347 aa7.05□□□□□ -1.28
CPNE3-209ENST00000620393 MRPL3P09001 348 aaKnown RBP7.05□□□□□ -1.28
CPNE3-209ENST00000620393 ALOX5APP20292 161 aa7.05□□□□□ -1.28
CPNE3-209ENST00000620393 MSR1P21757 451 aa7.05□□□□□ -1.28
CPNE3-209ENST00000620393 NAA10P41227 235 aaPredicted RBP7.05□□□□□ -1.28
CPNE3-209ENST00000620393 ENTPD1P49961 510 aa7.05□□□□□ -1.28
CPNE3-209ENST00000620393 FOXG1P55316 489 aaPredicted RBP7.05□□□□□ -1.28
CPNE3-209ENST00000620393 ACTC1P68032 377 aa7.05□□□□□ -1.28
CPNE3-209ENST00000620393 ACTA1P68133 377 aa7.05□□□□□ -1.28
CPNE3-209ENST00000620393 ADAM8P78325 824 aa7.05□□□□□ -1.28
CPNE3-209ENST00000620393 ARF1P84077 181 aaKnown RBP7.05□□□□□ -1.28
CPNE3-209ENST00000620393 EMX1Q04741 257 aaPredicted RBP7.05□□□□□ -1.28
CPNE3-209ENST00000620393 MRPL49Q13405 166 aaKnown RBP7.05□□□□□ -1.28
CPNE3-209ENST00000620393 GALEQ14376 348 aa7.05□□□□□ -1.28
CPNE3-209ENST00000620393 IGFBP7Q16270 282 aa7.05□□□□□ -1.28
CPNE3-209ENST00000620393 MEP1BQ16820 701 aa7.05□□□□□ -1.28
CPNE3-209ENST00000620393 SOWAHCQ53LP3 525 aaPredicted RBP7.05□□□□□ -1.28
CPNE3-209ENST00000620393 ZNF813Q6ZN06 617 aa7.05□□□□□ -1.28
CPNE3-209ENST00000620393 BEND4Q6ZU67 534 aa7.05□□□□□ -1.28
CPNE3-209ENST00000620393 DPY19L4Q7Z388 723 aa7.05□□□□□ -1.28
CPNE3-209ENST00000620393 LHFPL3Q86UP9 236 aa7.05□□□□□ -1.28
CPNE3-209ENST00000620393 CDC20BQ86Y33 519 aa7.05□□□□□ -1.28
CPNE3-209ENST00000620393 EGFL6Q8IUX8 553 aa7.05□□□□□ -1.28
CPNE3-209ENST00000620393 SLC35F2Q8IXU6 374 aa7.05□□□□□ -1.28
CPNE3-209ENST00000620393 GABRG1Q8N1C3 465 aa7.05□□□□□ -1.28
CPNE3-209ENST00000620393 OR10H4Q8NGA5 316 aa7.05□□□□□ -1.28
CPNE3-209ENST00000620393 OR10H5Q8NGA6 315 aa7.05□□□□□ -1.28
CPNE3-209ENST00000620393 OR6N2Q8NGY6 317 aa7.05□□□□□ -1.28
CPNE3-209ENST00000620393 OTOSQ8NHW6 89 aa7.05□□□□□ -1.28
CPNE3-209ENST00000620393 NABP1Q96AH0 204 aa7.05□□□□□ -1.28
CPNE3-209ENST00000620393 ALKBH3Q96Q83 286 aaPredicted RBP7.05□□□□□ -1.28
CPNE3-209ENST00000620393 FOXB1Q99853 325 aa7.05□□□□□ -1.28
CPNE3-209ENST00000620393 WACQ9BTA9 647 aa7.05□□□□□ -1.28
CPNE3-209ENST00000620393 NELFAQ9H3P2 528 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms