RNA–Protein interactions for RNA: ENST00000620219.4

CPSF1-213, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-213ENST00000620219 P2RY10O00398 339 aa14.09□□□□□ -0.15
CPSF1-213ENST00000620219 TPTEP56180 551 aa14.09□□□□□ -0.15
CPSF1-213ENST00000620219 SLC25A25Q6KCM7 469 aa14.09□□□□□ -0.15
CPSF1-213ENST00000620219 FAM57BQ71RH2 274 aa14.09□□□□□ -0.15
CPSF1-213ENST00000620219 WDSUB1Q8N9V3 476 aa14.09□□□□□ -0.15
CPSF1-213ENST00000620219 ABHD6Q9BV23 337 aa14.09□□□□□ -0.15
CPSF1-213ENST00000620219 POTEKPQ9BYX7 375 aa14.09□□□□□ -0.15
CPSF1-213ENST00000620219 C12orf10Q9HB07 376 aa14.09□□□□□ -0.15
CPSF1-213ENST00000620219 SLC5A6Q9Y289 635 aa14.09□□□□□ -0.15
CPSF1-213ENST00000620219 CHCHD2Q9Y6H1 151 aaPredicted RBP14.09□□□□□ -0.15
CPSF1-213ENST00000620219 A0A0G2JMM0 328 aa14.08□□□□□ -0.15
CPSF1-213ENST00000620219 A0A1W2PPB8 328 aa14.08□□□□□ -0.15
CPSF1-213ENST00000620219 A0A1W2PRS3 328 aa14.08□□□□□ -0.15
CPSF1-213ENST00000620219 KIR3DP1A8MWS1 328 aa14.08□□□□□ -0.15
CPSF1-213ENST00000620219 LCATP04180 440 aa14.08□□□□□ -0.15
CPSF1-213ENST00000620219 PSKH1P11801 424 aa14.08□□□□□ -0.15
CPSF1-213ENST00000620219 ZNF362Q5T0B9 420 aaPredicted RBP14.08□□□□□ -0.15
CPSF1-213ENST00000620219 ZNF554Q86TJ5 538 aa14.08□□□□□ -0.15
CPSF1-213ENST00000620219 ZNF441Q8N8Z8 693 aa14.08□□□□□ -0.15
CPSF1-213ENST00000620219 FAM173AQ9BQD7 235 aa14.08□□□□□ -0.15
CPSF1-213ENST00000620219 LRFN3Q9BTN0 628 aa14.08□□□□□ -0.15
CPSF1-213ENST00000620219 MRPL15Q9P015 296 aaKnown RBP14.08□□□□□ -0.15
CPSF1-213ENST00000620219 PIEZO2Q9H5I5 2752 aa14.08□□□□□ -0.15
CPSF1-213ENST00000620219 FUOMA2VDF0 154 aa14.08□□□□□ -0.16
CPSF1-213ENST00000620219 CCDC182A6NF36 153 aa14.08□□□□□ -0.16
CPSF1-213ENST00000620219 BCAP31P51572 246 aa14.08□□□□□ -0.16
CPSF1-213ENST00000620219 SLC25A30Q5SVS4 291 aa14.08□□□□□ -0.16
CPSF1-213ENST00000620219 PXKQ7Z7A4 578 aa14.08□□□□□ -0.16
CPSF1-213ENST00000620219 FAM71CQ8NEG0 241 aa14.08□□□□□ -0.16
CPSF1-213ENST00000620219 SLC25A44Q96H78 314 aaPredicted RBP14.08□□□□□ -0.16
CPSF1-213ENST00000620219 PALMDQ9NP74 551 aa14.08□□□□□ -0.16
CPSF1-213ENST00000620219 EXOGQ9Y2C4 368 aaKnown RBP14.08□□□□□ -0.16
CPSF1-213ENST00000620219 PHF3Q92576 2039 aaKnown RBP14.08□□□□□ -0.16
CPSF1-213ENST00000620219 PIEZO1Q92508 2521 aa14.08□□□□□ -0.16
CPSF1-213ENST00000620219 INHBBP09529 407 aa14.08□□□□□ -0.16
CPSF1-213ENST00000620219 ABOP16442 354 aa14.08□□□□□ -0.16
CPSF1-213ENST00000620219 LAP3P28838 519 aa14.08□□□□□ -0.16
CPSF1-213ENST00000620219 MEOX1P50221 254 aa14.08□□□□□ -0.16
CPSF1-213ENST00000620219 LYSMD2Q8IV50 215 aa14.08□□□□□ -0.16
CPSF1-213ENST00000620219 TRABD2BA6NFA1 517 aa14.07□□□□□ -0.16
CPSF1-213ENST00000620219 CDK5R1Q15078 307 aa14.07□□□□□ -0.16
CPSF1-213ENST00000620219 P2RY14Q15391 338 aa14.07□□□□□ -0.16
CPSF1-213ENST00000620219 PLA2G2CQ5R387 149 aa14.07□□□□□ -0.16
CPSF1-213ENST00000620219 FNDC7Q5VTL7 733 aa14.07□□□□□ -0.16
CPSF1-213ENST00000620219 PLET1Q6UQ28 207 aa14.07□□□□□ -0.16
CPSF1-213ENST00000620219 C11orf40Q8WZ69 217 aa14.07□□□□□ -0.16
CPSF1-213ENST00000620219 ZNF426Q9BUY5 554 aa14.07□□□□□ -0.16
CPSF1-213ENST00000620219 POLEQ07864 2286 aa14.07□□□□□ -0.16
CPSF1-213ENST00000620219 A0A087WZY1 265 aa14.07□□□□□ -0.16
CPSF1-213ENST00000620219 TAF4O00268 1085 aa14.07□□□□□ -0.16
CPSF1-213ENST00000620219 EEF1E1O43324 174 aaKnown RBP14.07□□□□□ -0.16
CPSF1-213ENST00000620219 SLC43A1O75387 559 aa14.07□□□□□ -0.16
CPSF1-213ENST00000620219 RFPL3SP0C7P2 107 aa14.07□□□□□ -0.16
CPSF1-213ENST00000620219 HOXC12P31275 282 aa14.07□□□□□ -0.16
CPSF1-213ENST00000620219 MZT2BQ6NZ67 158 aa14.07□□□□□ -0.16
CPSF1-213ENST00000620219 OR10D3Q8NH80 312 aa14.07□□□□□ -0.16
CPSF1-213ENST00000620219 ZNF766Q5HY98 468 aa14.07□□□□□ -0.16
CPSF1-213ENST00000620219 KCTD20Q7Z5Y7 419 aa14.07□□□□□ -0.16
CPSF1-213ENST00000620219 ITGA5P08648 1049 aa14.07□□□□□ -0.16
CPSF1-213ENST00000620219 SDHBP21912 280 aa14.07□□□□□ -0.16
CPSF1-213ENST00000620219 PPP1R14AQ96A00 147 aa14.07□□□□□ -0.16
CPSF1-213ENST00000620219 IRF2BPLQ9H1B7 796 aa14.07□□□□□ -0.16
CPSF1-213ENST00000620219 MMP28Q9H239 520 aa14.07□□□□□ -0.16
CPSF1-213ENST00000620219 MED13Q9UHV7 2174 aa14.06□□□□□ -0.16
CPSF1-213ENST00000620219 A0A096LPE4 126 aa14.06□□□□□ -0.16
CPSF1-213ENST00000620219 A0A1W2PPZ6 126 aa14.06□□□□□ -0.16
CPSF1-213ENST00000620219 APEHP13798 732 aaKnown RBP14.06□□□□□ -0.16
CPSF1-213ENST00000620219 KISS1RQ969F8 398 aaPredicted RBP14.06□□□□□ -0.16
CPSF1-213ENST00000620219 FAIMQ9NVQ4 179 aa14.06□□□□□ -0.16
CPSF1-213ENST00000620219 A0A0J9YW62 118 aa14.06□□□□□ -0.16
CPSF1-213ENST00000620219 ZNF208O43345 1280 aa14.06□□□□□ -0.16
CPSF1-213ENST00000620219 RAMP1O60894 148 aa14.06□□□□□ -0.16
CPSF1-213ENST00000620219 IGHA1P01876 353 aa14.06□□□□□ -0.16
CPSF1-213ENST00000620219 RAC1P63000 192 aa14.06□□□□□ -0.16
CPSF1-213ENST00000620219 PMP22Q01453 160 aa14.06□□□□□ -0.16
CPSF1-213ENST00000620219 Q6ZNX1 250 aa14.06□□□□□ -0.16
CPSF1-213ENST00000620219 SLC16A14Q7RTX9 510 aa14.06□□□□□ -0.16
CPSF1-213ENST00000620219 ZNF227Q86WZ6 799 aa14.06□□□□□ -0.16
CPSF1-213ENST00000620219 OR5M9Q8NGP3 310 aa14.06□□□□□ -0.16
CPSF1-213ENST00000620219 OR2V1Q8NHB1 315 aa14.06□□□□□ -0.16
CPSF1-213ENST00000620219 OIT3Q8WWZ8 545 aa14.06□□□□□ -0.16
CPSF1-213ENST00000620219 ASB17Q8WXJ9 295 aa14.06□□□□□ -0.16
CPSF1-213ENST00000620219 ITFG2Q969R8 447 aa14.06□□□□□ -0.16
CPSF1-213ENST00000620219 ZNF845Q96IR2 970 aaPredicted RBP14.06□□□□□ -0.16
CPSF1-213ENST00000620219 HHLA2Q9UM44 414 aa14.06□□□□□ -0.16
CPSF1-213ENST00000620219 SSX4O60224 188 aa14.06□□□□□ -0.16
CPSF1-213ENST00000620219 SRD5A2P31213 254 aa14.06□□□□□ -0.16
CPSF1-213ENST00000620219 RCVRNP35243 200 aa14.06□□□□□ -0.16
CPSF1-213ENST00000620219 SRSF6Q13247 344 aaKnown RBP14.06□□□□□ -0.16
CPSF1-213ENST00000620219 EXOSC6Q5RKV6 272 aaKnown RBP14.06□□□□□ -0.16
CPSF1-213ENST00000620219 ZNF813Q6ZN06 617 aa14.06□□□□□ -0.16
CPSF1-213ENST00000620219 NRARPQ7Z6K4 114 aa14.06□□□□□ -0.16
CPSF1-213ENST00000620219 GTPBP8Q8N3Z3 284 aaPredicted RBP14.06□□□□□ -0.16
CPSF1-213ENST00000620219 PAQR8Q8TEZ7 354 aa14.06□□□□□ -0.16
CPSF1-213ENST00000620219 SLAMF6Q96DU3 332 aa14.06□□□□□ -0.16
CPSF1-213ENST00000620219 PRRX2Q99811 253 aa14.06□□□□□ -0.16
CPSF1-213ENST00000620219 CSN2P05814 226 aa14.05□□□□□ -0.16
CPSF1-213ENST00000620219 PATE4P0C8F1 98 aa14.05□□□□□ -0.16
CPSF1-213ENST00000620219 SLC25A35Q3KQZ1 300 aa14.05□□□□□ -0.16
CPSF1-213ENST00000620219 SUMF1Q8NBK3 374 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms