RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	CD3D	P04234	171 aa		13.09	□□□□□ -0.31
SMTN-223	ENST00000619644	PSMD4	P55036	377 aa	Known RBP	13.09	□□□□□ -0.31
SMTN-223	ENST00000619644	ATXN7L3	Q14CW9	347 aa	Predicted RBP	13.09	□□□□□ -0.31
SMTN-223	ENST00000619644	MEP1B	Q16820	701 aa		13.09	□□□□□ -0.31
SMTN-223	ENST00000619644	EXOSC6	Q5RKV6	272 aa	Known RBP	13.09	□□□□□ -0.31
SMTN-223	ENST00000619644	ARHGAP40	Q5TG30	622 aa		13.09	□□□□□ -0.31
SMTN-223	ENST00000619644	MOB3C	Q70IA8	216 aa		13.09	□□□□□ -0.31
SMTN-223	ENST00000619644	PUSL1	Q8N0Z8	303 aa	Known RBP	13.09	□□□□□ -0.31
SMTN-223	ENST00000619644	SLC22A18AS	Q8N1D0	253 aa		13.09	□□□□□ -0.31
SMTN-223	ENST00000619644	KDM8	Q8N371	416 aa		13.09	□□□□□ -0.31
SMTN-223	ENST00000619644	INTS14	Q96SY0	518 aa		13.09	□□□□□ -0.31
SMTN-223	ENST00000619644	CHST6	Q9GZX3	395 aa		13.09	□□□□□ -0.31
SMTN-223	ENST00000619644	CTSF	Q9UBX1	484 aa		13.09	□□□□□ -0.31
SMTN-223	ENST00000619644	TRAV14DV4	A0A0A6YYC5	116 aa		13.09	□□□□□ -0.31
SMTN-223	ENST00000619644	RFPL4A	A6NLU0	287 aa		13.09	□□□□□ -0.31
SMTN-223	ENST00000619644	RFPL4AL1	F8VTS6	287 aa		13.09	□□□□□ -0.31
SMTN-223	ENST00000619644	CALCB	P10092	127 aa		13.09	□□□□□ -0.31
SMTN-223	ENST00000619644	CXCR1	P25024	350 aa		13.09	□□□□□ -0.31
SMTN-223	ENST00000619644	IGSF11	Q5DX21	431 aa		13.09	□□□□□ -0.31
SMTN-223	ENST00000619644	MEST	Q5EB52	335 aa		13.09	□□□□□ -0.31
SMTN-223	ENST00000619644	LDLRAD3	Q86YD5	345 aa		13.09	□□□□□ -0.31
SMTN-223	ENST00000619644	CBLN2	Q8IUK8	224 aa		13.09	□□□□□ -0.31
SMTN-223	ENST00000619644	METTL21A	Q8WXB1	218 aa		13.09	□□□□□ -0.31
SMTN-223	ENST00000619644	PHYHIP	Q92561	330 aa		13.09	□□□□□ -0.31
SMTN-223	ENST00000619644	PMM1	Q92871	262 aa		13.09	□□□□□ -0.31
SMTN-223	ENST00000619644	ADAT1	Q9BUB4	502 aa	Known RBP	13.09	□□□□□ -0.31
SMTN-223	ENST00000619644	WDR13	Q9H1Z4	485 aa		13.09	□□□□□ -0.31
SMTN-223	ENST00000619644	MMP25	Q9NPA2	562 aa		13.09	□□□□□ -0.31
SMTN-223	ENST00000619644	CYP8B1	Q9UNU6	501 aa		13.09	□□□□□ -0.31
SMTN-223	ENST00000619644		M0QYG6	137 aa		13.08	□□□□□ -0.32
SMTN-223	ENST00000619644	SLC25A12	O75746	678 aa		13.08	□□□□□ -0.32
SMTN-223	ENST00000619644	GLS	O94925	669 aa	Predicted RBP	13.08	□□□□□ -0.32
SMTN-223	ENST00000619644	SEMA4F	O95754	770 aa		13.08	□□□□□ -0.32
SMTN-223	ENST00000619644	THEGL	P0DJG4	465 aa		13.08	□□□□□ -0.32
SMTN-223	ENST00000619644	PVALB	P20472	110 aa	Predicted RBP	13.08	□□□□□ -0.32
SMTN-223	ENST00000619644	OR1D4	P47884	311 aa		13.08	□□□□□ -0.32
SMTN-223	ENST00000619644	LUM	P51884	338 aa	Predicted RBP	13.08	□□□□□ -0.32
SMTN-223	ENST00000619644	TGM7	Q96PF1	710 aa		13.08	□□□□□ -0.32
SMTN-223	ENST00000619644	TSPAN32	Q96QS1	320 aa		13.08	□□□□□ -0.32
SMTN-223	ENST00000619644	NMNAT2	Q9BZQ4	307 aa		13.08	□□□□□ -0.32
SMTN-223	ENST00000619644	NXF5	Q9H1B4	397 aa	Known RBP	13.08	□□□□□ -0.32
SMTN-223	ENST00000619644	GP1BA	P07359	652 aa		13.08	□□□□□ -0.32
SMTN-223	ENST00000619644	OR10K2	Q6IF99	312 aa		13.08	□□□□□ -0.32
SMTN-223	ENST00000619644	ZNF546	Q86UE3	836 aa		13.08	□□□□□ -0.32
SMTN-223	ENST00000619644	ZNF524	Q96C55	264 aa		13.08	□□□□□ -0.32
SMTN-223	ENST00000619644	GABRG3	Q99928	467 aa		13.08	□□□□□ -0.32
SMTN-223	ENST00000619644	SEMA6C	Q9H3T2	930 aa		13.08	□□□□□ -0.32
SMTN-223	ENST00000619644	BIN3	Q9NQY0	253 aa		13.08	□□□□□ -0.32
SMTN-223	ENST00000619644	UBQLN4	Q9NRR5	601 aa		13.08	□□□□□ -0.32
SMTN-223	ENST00000619644	STEAP1	Q9UHE8	339 aa		13.08	□□□□□ -0.32
SMTN-223	ENST00000619644	CYB5R1	Q9UHQ9	305 aa		13.08	□□□□□ -0.32
SMTN-223	ENST00000619644	ZNF264	O43296	627 aa		13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	FOXS1	O43638	330 aa		13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	PRSS3	P35030	304 aa		13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	GPR3	P46089	330 aa		13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	AKR1C2	P52895	323 aa		13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	UBE2I	P63279	158 aa	Known RBP	13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	AKR1C1	Q04828	323 aa		13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	MPPED2	Q15777	294 aa		13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	TOMM34	Q15785	309 aa	Predicted RBP	13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	GUCA2B	Q16661	112 aa		13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	ZNF528	Q3MIS6	628 aa		13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	CCDC157	Q569K6	752 aa		13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	BEX5	Q5H9J7	111 aa		13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	NDUFAF7	Q7L592	441 aa		13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	MDGA2	Q7Z553	956 aa		13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	JAGN1	Q8N5M9	183 aa		13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	ZNF417	Q8TAU3	575 aa		13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	TAAR8	Q969N4	342 aa		13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	ZNF75A	Q96N20	296 aa		13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	TMEM185B	Q9H7F4	350 aa		13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	CGGBP1	Q9UFW8	167 aa	Predicted RBP	13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	PIAS3	Q9Y6X2	628 aa		13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	FAM25E	A8MYX2	175 aa		13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	SLC16A7	O60669	478 aa		13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	NKPD1	Q17RQ9	610 aa		13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	C2orf76	Q3KRA6	126 aa		13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	WDR38	Q5JTN6	314 aa		13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	KRT77	Q7Z794	578 aa		13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	RLN3	Q8WXF3	142 aa		13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	ELSPBP1	Q96BH3	223 aa		13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	LRFN5	Q96NI6	719 aa		13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	PQLC2L	A1A4F0	135 aa		13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	GGT3P	A6NGU5	568 aa		13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	OR4C45	A6NMZ5	311 aa		13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	TNFRSF10C	O14798	259 aa		13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	UTS2	O95399	124 aa		13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	ITGA5	P08648	1049 aa		13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	POU2F2	P09086	479 aa		13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	PNMT	P11086	282 aa		13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	EN2	P19622	333 aa	Predicted RBP	13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	CD96	P40200	585 aa		13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	SKP1	P63208	163 aa		13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	TMEM184A	Q6ZMB5	413 aa		13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	LRRTM1	Q86UE6	522 aa		13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	PRSS35	Q8N3Z0	413 aa		13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	ZNF230	Q9UIE0	474 aa	Predicted RBP	13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	YBX2	Q9Y2T7	364 aa	Known RBP	13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	TMEM184B	Q9Y519	407 aa	Predicted RBP	13.07	□□□□□ -0.32
SMTN-223	ENST00000619644	EML5	Q05BV3	1969 aa		13.06	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms