RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 CYBRD1Q53TN4 286 aa10.17□□□□□ -0.78
UPF3B-204ENST00000619445 MBNL2Q5VZF2 373 aaKnown RBP10.17□□□□□ -0.78
UPF3B-204ENST00000619445 USP43Q70EL4 1123 aa10.17□□□□□ -0.78
UPF3B-204ENST00000619445 SYT9Q86SS6 491 aa10.17□□□□□ -0.78
UPF3B-204ENST00000619445 PEG10Q86TG7 708 aaKnown RBP10.17□□□□□ -0.78
UPF3B-204ENST00000619445 TREML1Q86YW5 311 aa10.17□□□□□ -0.78
UPF3B-204ENST00000619445 NKAIN4Q8IVV8 208 aa10.17□□□□□ -0.78
UPF3B-204ENST00000619445 RNF113BQ8IZP6 322 aaKnown RBP10.17□□□□□ -0.78
UPF3B-204ENST00000619445 PAQR4Q8N4S7 273 aaPredicted RBP10.17□□□□□ -0.78
UPF3B-204ENST00000619445 ICA1LQ8NDH6 482 aa10.17□□□□□ -0.78
UPF3B-204ENST00000619445 OR2T12Q8NG77 320 aa10.17□□□□□ -0.78
UPF3B-204ENST00000619445 OR4M2Q8NGB6 313 aa10.17□□□□□ -0.78
UPF3B-204ENST00000619445 PFN4Q8NHR9 129 aa10.17□□□□□ -0.78
UPF3B-204ENST00000619445 C10orf82Q8WW14 230 aa10.17□□□□□ -0.78
UPF3B-204ENST00000619445 BPIFA2Q96DR5 249 aa10.17□□□□□ -0.78
UPF3B-204ENST00000619445 PRRC1Q96M27 445 aa10.17□□□□□ -0.78
UPF3B-204ENST00000619445 METTL17Q9H7H0 456 aaPredicted RBP10.17□□□□□ -0.78
UPF3B-204ENST00000619445 ZNF665Q9H7R5 613 aa10.17□□□□□ -0.78
UPF3B-204ENST00000619445 TREM2Q9NZC2 230 aa10.17□□□□□ -0.78
UPF3B-204ENST00000619445 ZDHHC8Q9ULC8 765 aa10.17□□□□□ -0.78
UPF3B-204ENST00000619445 NDRG4Q9ULP0 352 aaKnown RBP10.17□□□□□ -0.78
UPF3B-204ENST00000619445 TIMM10BQ9Y5J6 103 aa10.17□□□□□ -0.78
UPF3B-204ENST00000619445 ELOVL7A1L3X0 281 aa10.16□□□□□ -0.78
UPF3B-204ENST00000619445 C5orf49A4QMS7 147 aa10.16□□□□□ -0.78
UPF3B-204ENST00000619445 C12orf71A8MTZ7 269 aa10.16□□□□□ -0.78
UPF3B-204ENST00000619445 FAM157AC9JC47 383 aa10.16□□□□□ -0.78
UPF3B-204ENST00000619445 NDUFAB1O14561 156 aa10.16□□□□□ -0.78
UPF3B-204ENST00000619445 AHCYL1O43865 530 aa10.16□□□□□ -0.78
UPF3B-204ENST00000619445 IFNW1P05000 195 aa10.16□□□□□ -0.78
UPF3B-204ENST00000619445 CCL2P13500 99 aa10.16□□□□□ -0.78
UPF3B-204ENST00000619445 ZNF32P17041 273 aa10.16□□□□□ -0.78
UPF3B-204ENST00000619445 ITGA2P17301 1181 aa10.16□□□□□ -0.78
UPF3B-204ENST00000619445 CCNOP22674 350 aa10.16□□□□□ -0.78
UPF3B-204ENST00000619445 MAGEB1P43366 347 aa10.16□□□□□ -0.78
UPF3B-204ENST00000619445 SELENOWP63302 87 aa10.16□□□□□ -0.78
UPF3B-204ENST00000619445 KLF10Q13118 480 aa10.16□□□□□ -0.78
UPF3B-204ENST00000619445 SGCAQ16586 387 aa10.16□□□□□ -0.78
UPF3B-204ENST00000619445 LRRC23Q53EV4 343 aaPredicted RBP10.16□□□□□ -0.78
UPF3B-204ENST00000619445 FAM156AQ8NDB6 213 aa10.16□□□□□ -0.78
UPF3B-204ENST00000619445 NABP1Q96AH0 204 aa10.16□□□□□ -0.78
UPF3B-204ENST00000619445 NMD3Q96D46 503 aaKnown RBP10.16□□□□□ -0.78
UPF3B-204ENST00000619445 POM121L2Q96KW2 1035 aa10.16□□□□□ -0.78
UPF3B-204ENST00000619445 COG8Q96MW5 612 aa10.16□□□□□ -0.78
UPF3B-204ENST00000619445 ZNF583Q96ND8 569 aa10.16□□□□□ -0.78
UPF3B-204ENST00000619445 NARFLQ9H6Q4 476 aa10.16□□□□□ -0.78
UPF3B-204ENST00000619445 C20orf141Q9NUB4 165 aa10.16□□□□□ -0.78
UPF3B-204ENST00000619445 UGT2A1Q9Y4X1 527 aa10.16□□□□□ -0.78
UPF3B-204ENST00000619445 CDC14BO60729 498 aa10.15□□□□□ -0.78
UPF3B-204ENST00000619445 SLC2A10O95528 541 aa10.15□□□□□ -0.78
UPF3B-204ENST00000619445 COX5BP10606 129 aa10.15□□□□□ -0.78
UPF3B-204ENST00000619445 IFI30P13284 250 aa10.15□□□□□ -0.78
UPF3B-204ENST00000619445 LIMS1P48059 325 aa10.15□□□□□ -0.78
UPF3B-204ENST00000619445 LAPTM4AQ15012 233 aa10.15□□□□□ -0.78
UPF3B-204ENST00000619445 TRAM2Q15035 370 aa10.15□□□□□ -0.78
UPF3B-204ENST00000619445 ALKBH6Q3KRA9 238 aa10.15□□□□□ -0.78
UPF3B-204ENST00000619445 FAHD2BQ6P2I3 314 aaPredicted RBP10.15□□□□□ -0.78
UPF3B-204ENST00000619445 SLC25A47Q6Q0C1 308 aa10.15□□□□□ -0.78
UPF3B-204ENST00000619445 C12orf54Q6X4T0 127 aa10.15□□□□□ -0.78
UPF3B-204ENST00000619445 USP51Q70EK9 711 aa10.15□□□□□ -0.78
UPF3B-204ENST00000619445 MICU2Q8IYU8 434 aa10.15□□□□□ -0.78
UPF3B-204ENST00000619445 OFCC1Q8IZS5 231 aa10.15□□□□□ -0.78
UPF3B-204ENST00000619445 NPEPL1Q8NDH3 523 aa10.15□□□□□ -0.78
UPF3B-204ENST00000619445 MOSPD2Q8NHP6 518 aa10.15□□□□□ -0.78
UPF3B-204ENST00000619445 HDAC2Q92769 488 aaKnown RBP10.15□□□□□ -0.78
UPF3B-204ENST00000619445 FAHD2AQ96GK7 314 aa10.15□□□□□ -0.78
UPF3B-204ENST00000619445 MARS2Q96GW9 593 aaKnown RBP10.15□□□□□ -0.78
UPF3B-204ENST00000619445 TPD52L3Q96J77 140 aa10.15□□□□□ -0.78
UPF3B-204ENST00000619445 FNDC11Q9BVV2 318 aa10.15□□□□□ -0.78
UPF3B-204ENST00000619445 OR51B6Q9H340 312 aa10.15□□□□□ -0.78
UPF3B-204ENST00000619445 SAR1AQ9NR31 198 aa10.15□□□□□ -0.78
UPF3B-204ENST00000619445 CAPN7Q9Y6W3 813 aa10.15□□□□□ -0.78
UPF3B-204ENST00000619445 TRIM77I1YAP6 450 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 MPZL1O95297 269 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 GSTM3P21266 225 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 MSR1P21757 451 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 TNFSF4P23510 183 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 CDAP32320 146 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 OR1E2P47887 323 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 CTXN1P60606 82 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 ERVS71-1P61550 626 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 PSG4Q00888 419 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 TOP3AQ13472 1001 aaPredicted RBP10.14□□□□□ -0.79
UPF3B-204ENST00000619445 FOXL2NBQ6ZUU3 175 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 RRM2BQ7LG56 351 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 OAFQ86UD1 273 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 KLF14Q8TD94 323 aaPredicted RBP10.14□□□□□ -0.79
UPF3B-204ENST00000619445 GEMIN6Q8WXD5 167 aaKnown RBP10.14□□□□□ -0.79
UPF3B-204ENST00000619445 NSMAFQ92636 917 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 ZMYND19Q96E35 227 aaPredicted RBP10.14□□□□□ -0.79
UPF3B-204ENST00000619445 RBM4Q9BWF3 364 aaKnown RBP10.14□□□□□ -0.79
UPF3B-204ENST00000619445 SUCNR1Q9BXA5 334 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 OR2H1Q9GZK4 316 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 ANKRD19PQ9H560 264 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 LPAR2Q9HBW0 351 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 A4GNTQ9UNA3 340 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 TMEM5Q9Y2B1 443 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 WIPI2Q9Y4P8 454 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 PPIAL4EA0A075B759 164 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 PPIAL4CA0A0B4J2A2 164 aa10.14□□□□□ -0.79
UPF3B-204ENST00000619445 EFCAB9A8MZ26 197 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms