RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-222	ENST00000617185	NCOR1P1	Q9H4R4	102 aa		10.5	□□□□□ -0.73
TP53-222	ENST00000617185	PRDM7	Q9NQW5	492 aa		10.5	□□□□□ -0.73
TP53-222	ENST00000617185	DNAJB11	Q9UBS4	358 aa		10.5	□□□□□ -0.73
TP53-222	ENST00000617185		V9GY05	133 aa		10.5	□□□□□ -0.73
TP53-222	ENST00000617185	SLC22A31	A6NKX4	558 aa		10.5	□□□□□ -0.73
TP53-222	ENST00000617185	ZNF724	A8MTY0	619 aa		10.5	□□□□□ -0.73
TP53-222	ENST00000617185	SMAD9	O15198	467 aa	Known RBP	10.5	□□□□□ -0.73
TP53-222	ENST00000617185	OGG1	O15527	345 aa		10.5	□□□□□ -0.73
TP53-222	ENST00000617185	OR2C1	O95371	312 aa		10.5	□□□□□ -0.73
TP53-222	ENST00000617185	SPARC	P09486	303 aa		10.5	□□□□□ -0.73
TP53-222	ENST00000617185	F5	P12259	2224 aa		10.5	□□□□□ -0.73
TP53-222	ENST00000617185	LPAR6	P43657	344 aa		10.5	□□□□□ -0.73
TP53-222	ENST00000617185	TAS2R41	P59536	307 aa		10.5	□□□□□ -0.73
TP53-222	ENST00000617185	NKX6-1	P78426	367 aa	Predicted RBP	10.5	□□□□□ -0.73
TP53-222	ENST00000617185	SLBP	Q14493	270 aa	Known RBP eCLIP	10.5	□□□□□ -0.73
TP53-222	ENST00000617185	SLC10A1	Q14973	349 aa		10.5	□□□□□ -0.73
TP53-222	ENST00000617185	ZNHIT3	Q15649	155 aa	Predicted RBP	10.5	□□□□□ -0.73
TP53-222	ENST00000617185	PRPF38B	Q5VTL8	546 aa	Known RBP	10.5	□□□□□ -0.73
TP53-222	ENST00000617185	EIF5AL1	Q6IS14	154 aa	Known RBP	10.5	□□□□□ -0.73
TP53-222	ENST00000617185	AGTRAP	Q6RW13	159 aa		10.5	□□□□□ -0.73
TP53-222	ENST00000617185	ZNF620	Q6ZNG0	422 aa		10.5	□□□□□ -0.73
TP53-222	ENST00000617185	PEG10	Q86TG7	708 aa	Known RBP	10.5	□□□□□ -0.73
TP53-222	ENST00000617185	THOC6	Q86W42	341 aa	Known RBP	10.5	□□□□□ -0.73
TP53-222	ENST00000617185	M1AP	Q8TC57	530 aa		10.5	□□□□□ -0.73
TP53-222	ENST00000617185	ASB17	Q8WXJ9	295 aa		10.5	□□□□□ -0.73
TP53-222	ENST00000617185	FGF13	Q92913	245 aa		10.5	□□□□□ -0.73
TP53-222	ENST00000617185	ZBTB8A	Q96BR9	441 aa		10.5	□□□□□ -0.73
TP53-222	ENST00000617185	CAMK1G	Q96NX5	476 aa		10.5	□□□□□ -0.73
TP53-222	ENST00000617185	GFI1	Q99684	422 aa		10.5	□□□□□ -0.73
TP53-222	ENST00000617185	MED20	Q9H944	212 aa		10.5	□□□□□ -0.73
TP53-222	ENST00000617185	TM7SF3	Q9NS93	570 aa		10.5	□□□□□ -0.73
TP53-222	ENST00000617185	NCDN	Q9UBB6	729 aa		10.5	□□□□□ -0.73
TP53-222	ENST00000617185	ETV7	Q9Y603	341 aa		10.5	□□□□□ -0.73
TP53-222	ENST00000617185		A0A087WUJ7	227 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	SLC5A10	A0PJK1	596 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	SMCO3	A2RU48	225 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	RPS2	P15880	293 aa	Known RBP	10.49	□□□□□ -0.73
TP53-222	ENST00000617185	NDUFV2	P19404	249 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	ITPKB	P27987	946 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	CD1C	P29017	333 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	RPS13	P62277	151 aa	Known RBP	10.49	□□□□□ -0.73
TP53-222	ENST00000617185	ZNF85	Q03923	595 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	GPM6B	Q13491	265 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	PDZD11	Q5EBL8	140 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	AKR1C8P	Q5T2L2	129 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	AWAT2	Q6E213	333 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	FAM71E1	Q6IPT2	247 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	TERB2	Q8NHR7	220 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	WFIKKN2	Q8TEU8	576 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	C16orf78	Q8WTQ4	265 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	DCUN1D4	Q92564	292 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	NEIL2	Q969S2	332 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	PTCHD1	Q96NR3	888 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	YPEL4	Q96NS1	127 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	AMDHD1	Q96NU7	426 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	ZNF385A	Q96PM9	386 aa	Known RBP	10.49	□□□□□ -0.73
TP53-222	ENST00000617185	SNHG12	Q9BXW3	62 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	MYNN	Q9NPC7	610 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	NOX4	Q9NPH5	578 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	PRODH2	Q9UF12	536 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	ICK	Q9UPZ9	632 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	KNL1	Q8NG31	2342 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185		M0R143	59 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	DCTN6	O00399	190 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	HMGN4	O00479	90 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	SOX15	O60248	233 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	ADAP1	O75689	374 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	PLG	P00747	810 aa	Predicted RBP	10.49	□□□□□ -0.73
TP53-222	ENST00000617185	NPS	P0C0P6	89 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	METTL15P1	P0C7V9	234 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	GPR1	P46091	355 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	SLC6A9	P48067	706 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	PNLIPRP1	P54315	467 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	TAS2R50	P59544	299 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	RPS11	P62280	158 aa	Known RBP eCLIP	10.49	□□□□□ -0.73
TP53-222	ENST00000617185	MRPS11	P82912	194 aa	Known RBP	10.49	□□□□□ -0.73
TP53-222	ENST00000617185	CDK5R1	Q15078	307 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	ODF4	Q2M2E3	257 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	C14orf28	Q4W4Y0	310 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	STEAP1B	Q6NZ63	245 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	UNQ9370/PRO34162	Q6UXP9	181 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	FRRS1	Q6ZNA5	592 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	COMMD6	Q7Z4G1	85 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	GJD3	Q8N144	294 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	ZNF664	Q8N3J9	261 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	HSD17B11	Q8NBQ5	300 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	RGP1	Q92546	391 aa	Predicted RBP	10.49	□□□□□ -0.73
TP53-222	ENST00000617185	KISS1R	Q969F8	398 aa	Predicted RBP	10.49	□□□□□ -0.73
TP53-222	ENST00000617185	PACRG	Q96M98	296 aa	Predicted RBP	10.49	□□□□□ -0.73
TP53-222	ENST00000617185	POTEKP	Q9BYX7	375 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	OR14J1	Q9UGF5	321 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	TVP23A	A6NH52	213 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	OR1F1	O43749	312 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	HIST1H2BK	O60814	126 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	CD3D	P04234	171 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	HIST1H2BJ	P06899	126 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	MRPL3	P09001	348 aa	Known RBP	10.49	□□□□□ -0.73
TP53-222	ENST00000617185	HIST1H2BO	P23527	126 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	IMPA1	P29218	277 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	HIST1H2BB	P33778	126 aa		10.49	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms