RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 TCEAL2Q9H3H9 227 aaPredicted RBP9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 METTL8Q9H825 291 aaKnown RBP9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 ANKRD10Q9NXR5 420 aa9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 KCNG2Q9UJ96 466 aa9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 GDF2Q9UK05 429 aaPredicted RBP9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 CCL26Q9Y258 94 aa9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 IER3IP1Q9Y5U9 82 aa9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 PLXNA4Q9HCM2 1894 aa9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 IGLV3-16A0A075B6K0 115 aa9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 A0A1B0GWJ7 208 aa9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 OR52A4PA6NMU1 304 aa9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 EIF1AYO14602 144 aaKnown RBP9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 NDUFS4O43181 175 aa9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 CTAG2O75638 210 aa9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 HOXC4P09017 264 aaPredicted RBP9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 COX5BP10606 129 aa9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 EIF1AXP47813 144 aaKnown RBP9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 DVL1P1P54792 670 aaPredicted RBP9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 Q499Y3 187 aa9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 FAM46CQ5VWP2 391 aa9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 PLD4Q96BZ4 506 aa9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 Q96M85 177 aa9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 IGFLR1Q9H665 355 aa9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 TAF9BQ9HBM6 251 aa9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 CACFD1Q9UGQ2 172 aa9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 PLXND1Q9Y4D7 1925 aa9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 A0A1W2PS29 197 aa9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 TSPAN11A1L157 253 aa9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 TVP23AA6NH52 213 aa9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 ITGB2P05107 769 aa9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 HOXB5P09067 269 aa9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 OR8U9P0C7N5 309 aa9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 ADRA2CP18825 462 aa9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 HOXA5P20719 270 aa9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 BSGP35613 385 aa9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 RAP1AP62834 184 aa9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 RNF44Q7L0R7 432 aa9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 SLC30A7Q8NEW0 376 aa9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 OR56A1Q8NGH5 318 aa9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 OR9A2Q8NGT5 310 aa9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 OR8U1Q8NH10 309 aa9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 MFSD8Q8NHS3 518 aa9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 ARHGDIGQ99819 225 aa9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 SOX7Q9BT81 388 aa9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 MSRAQ9UJ68 235 aa9.43□□□□□ -0.9
TNFAIP3-208ENST00000615468 NRG2O14511 850 aaPredicted RBP9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 PPIHO43447 177 aaKnown RBP9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 NME2P1O60361 137 aa9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 SRPX2O60687 465 aaPredicted RBP9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 IFNA10P01566 189 aa9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 SNRPCP09234 159 aaKnown RBP9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 NDUFS1P28331 727 aa9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 SLC6A6P31641 620 aa9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 NANOS3P60323 173 aaKnown RBP9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 EIF5AP63241 154 aaKnown RBP9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 OR2AG1Q9H205 316 aa9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 LHX9Q9NQ69 397 aa9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 TBX21Q9UL17 535 aa9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 FBXO7Q9Y3I1 522 aa9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 CLDN4O14493 209 aa9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 WNT11O96014 354 aa9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 ERCC1P07992 297 aaPredicted RBP9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 CD14P08571 375 aa9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 EDN3P14138 238 aa9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 EN2P19622 333 aaPredicted RBP9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 CSNK2A2P19784 350 aaPredicted RBP9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 PSMB5P28074 263 aa9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 GXYLT1Q4G148 440 aa9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 C4orf17Q53FE4 359 aa9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 ZNF385CQ66K41 422 aaPredicted RBP9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 TMPPEQ6ZT21 453 aa9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 LYG2Q86SG7 212 aa9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 SYS1Q8N2H4 156 aa9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 ZNF511Q8NB15 262 aa9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 CLEC1AQ8NC01 280 aa9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 SLC16A11Q8NCK7 471 aa9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 OR13C9Q8NGT0 318 aa9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 ROBO4Q8WZ75 1007 aa9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 PHYHIPQ92561 330 aa9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 TOX2Q96NM4 488 aa9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 NMNAT3Q96T66 252 aa9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 EGLN1Q9GZT9 426 aa9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 PRDM13Q9H4Q3 707 aa9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 TRAV8-7A0A075B6U6 113 aa9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 HIST1H1CP16403 213 aaKnown RBP9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 ZNF25P17030 456 aaPredicted RBP9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 CCKBRP32239 447 aa9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 CD70P32970 193 aa9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 RAB4BP61018 213 aa9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 OR1Q1Q15612 314 aa9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 MST1LQ2TV78 715 aa9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 NKAIN2Q5VXU1 208 aa9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 RPL7L1Q6DKI1 246 aaKnown RBP9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 Q6ZVU0 165 aa9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 OR1J1Q8NGS3 322 aa9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 CDS1Q92903 461 aa9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 CHST5Q9GZS9 411 aa9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 OR52A5Q9H2C5 316 aa9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 ZNF443Q9Y2A4 671 aaPredicted RBP9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 TMED7Q9Y3B3 224 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms