RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 ZNF607Q96SK3 696 aa19.72■□□□□ 0.75
MMP28-203ENST00000612672 PRSS27Q9BQR3 290 aa19.72■□□□□ 0.75
MMP28-203ENST00000612672 CPPED1Q9BRF8 314 aaPredicted RBP19.72■□□□□ 0.75
MMP28-203ENST00000612672 LRMDAQ9H2I8 198 aa19.72■□□□□ 0.75
MMP28-203ENST00000612672 POFUT1Q9H488 388 aa19.72■□□□□ 0.75
MMP28-203ENST00000612672 PATZ1Q9HBE1 687 aaKnown RBP19.72■□□□□ 0.75
MMP28-203ENST00000612672 SLC13A4Q9UKG4 626 aa19.72■□□□□ 0.75
MMP28-203ENST00000612672 SLC7A7Q9UM01 511 aa19.72■□□□□ 0.75
MMP28-203ENST00000612672 TMEM120BA0PK00 339 aa19.71■□□□□ 0.75
MMP28-203ENST00000612672 POM121CA8CG34 1229 aa19.71■□□□□ 0.75
MMP28-203ENST00000612672 A8MXK9 166 aa19.71■□□□□ 0.75
MMP28-203ENST00000612672 GPX2P18283 190 aa19.71■□□□□ 0.75
MMP28-203ENST00000612672 GCH1P30793 250 aa19.71■□□□□ 0.75
MMP28-203ENST00000612672 SLC6A9P48067 706 aa19.71■□□□□ 0.75
MMP28-203ENST00000612672 MRPL19P49406 292 aaKnown RBP19.71■□□□□ 0.75
MMP28-203ENST00000612672 ZNF84P51523 738 aa19.71■□□□□ 0.75
MMP28-203ENST00000612672 UGT2B15P54855 530 aa19.71■□□□□ 0.75
MMP28-203ENST00000612672 PSG4Q00888 419 aa19.71■□□□□ 0.75
MMP28-203ENST00000612672 RPL18Q07020 188 aaKnown RBP19.71■□□□□ 0.75
MMP28-203ENST00000612672 ZMYND11Q15326 602 aa19.71■□□□□ 0.75
MMP28-203ENST00000612672 WDR93Q6P2C0 686 aa19.71■□□□□ 0.75
MMP28-203ENST00000612672 BLOC1S3Q6QNY0 202 aa19.71■□□□□ 0.75
MMP28-203ENST00000612672 TREML1Q86YW5 311 aa19.71■□□□□ 0.75
MMP28-203ENST00000612672 HIPK4Q8NE63 616 aa19.71■□□□□ 0.75
MMP28-203ENST00000612672 VANGL1Q8TAA9 524 aaPredicted RBP19.71■□□□□ 0.75
MMP28-203ENST00000612672 GPA33Q99795 319 aa19.71■□□□□ 0.75
MMP28-203ENST00000612672 SLITRK2Q9H156 845 aa19.71■□□□□ 0.75
MMP28-203ENST00000612672 WNT5BQ9H1J7 359 aa19.71■□□□□ 0.75
MMP28-203ENST00000612672 PLSCR5A0PG75 271 aa19.7■□□□□ 0.74
MMP28-203ENST00000612672 BLOC1S5-TXNDC5H3BN57 136 aa19.7■□□□□ 0.74
MMP28-203ENST00000612672 CLDN34H7C241 214 aa19.7■□□□□ 0.74
MMP28-203ENST00000612672 GPANK1O95872 356 aa19.7■□□□□ 0.74
MMP28-203ENST00000612672 ERVK-25P63136 954 aa19.7■□□□□ 0.74
MMP28-203ENST00000612672 MRPS34P82930 218 aaKnown RBP19.7■□□□□ 0.74
MMP28-203ENST00000612672 SLC3A1Q07837 685 aa19.7■□□□□ 0.74
MMP28-203ENST00000612672 TTC33Q6PID6 262 aaPredicted RBP19.7■□□□□ 0.74
MMP28-203ENST00000612672 NANOGNBQ7Z5D8 188 aa19.7■□□□□ 0.74
MMP28-203ENST00000612672 ABHD4Q8TB40 342 aa19.7■□□□□ 0.74
MMP28-203ENST00000612672 HDAC2Q92769 488 aaKnown RBP19.7■□□□□ 0.74
MMP28-203ENST00000612672 SLC25A28Q96A46 364 aa19.7■□□□□ 0.74
MMP28-203ENST00000612672 SPDL1Q96EA4 605 aa19.7■□□□□ 0.74
MMP28-203ENST00000612672 EGLN1Q9GZT9 426 aa19.7■□□□□ 0.74
MMP28-203ENST00000612672 SIAEQ9HAT2 523 aa19.7■□□□□ 0.74
MMP28-203ENST00000612672 TMEM106BQ9NUM4 274 aa19.7■□□□□ 0.74
MMP28-203ENST00000612672 PDP1Q9P0J1 537 aaPredicted RBP19.7■□□□□ 0.74
MMP28-203ENST00000612672 DOCK11Q5JSL3 2073 aa19.69■□□□□ 0.74
MMP28-203ENST00000612672 SERPINB7O75635 380 aa19.69■□□□□ 0.74
MMP28-203ENST00000612672 UMPSP11172 480 aa19.69■□□□□ 0.74
MMP28-203ENST00000612672 ACADSP16219 412 aa19.69■□□□□ 0.74
MMP28-203ENST00000612672 CD247P20963 164 aa19.69■□□□□ 0.74
MMP28-203ENST00000612672 CD80P33681 288 aa19.69■□□□□ 0.74
MMP28-203ENST00000612672 PPP1CBP62140 327 aa19.69■□□□□ 0.74
MMP28-203ENST00000612672 PAX2Q02962 417 aa19.69■□□□□ 0.74
MMP28-203ENST00000612672 SELPLGQ14242 412 aa19.69■□□□□ 0.74
MMP28-203ENST00000612672 ARMC4Q5T2S8 1044 aa19.69■□□□□ 0.74
MMP28-203ENST00000612672 EPGNQ6UW88 154 aa19.69■□□□□ 0.74
MMP28-203ENST00000612672 Q6ZR03 302 aa19.69■□□□□ 0.74
MMP28-203ENST00000612672 MOSPD2Q8NHP6 518 aa19.69■□□□□ 0.74
MMP28-203ENST00000612672 PFN4Q8NHR9 129 aa19.69■□□□□ 0.74
MMP28-203ENST00000612672 PPIBP23284 216 aaKnown RBP19.68■□□□□ 0.74
MMP28-203ENST00000612672 AQP2P41181 271 aa19.68■□□□□ 0.74
MMP28-203ENST00000612672 TNFAIP6P98066 277 aaPredicted RBP19.68■□□□□ 0.74
MMP28-203ENST00000612672 PAX8Q06710 450 aa19.68■□□□□ 0.74
MMP28-203ENST00000612672 PSG7Q13046 419 aa19.68■□□□□ 0.74
MMP28-203ENST00000612672 CDK5R2Q13319 367 aa19.68■□□□□ 0.74
MMP28-203ENST00000612672 DLEU7Q6UYE1 221 aa19.68■□□□□ 0.74
MMP28-203ENST00000612672 ZNF283Q8N7M2 679 aa19.68■□□□□ 0.74
MMP28-203ENST00000612672 CLDN22Q8N7P3 220 aa19.68■□□□□ 0.74
MMP28-203ENST00000612672 NSMAFQ92636 917 aa19.68■□□□□ 0.74
MMP28-203ENST00000612672 TMIGD2Q96BF3 282 aa19.68■□□□□ 0.74
MMP28-203ENST00000612672 CCNB1IP1Q9NPC3 277 aa19.68■□□□□ 0.74
MMP28-203ENST00000612672 CCDC167Q9P0B6 97 aa19.68■□□□□ 0.74
MMP28-203ENST00000612672 ANGPT4Q9Y264 503 aa19.68■□□□□ 0.74
MMP28-203ENST00000612672 USH1CQ9Y6N9 552 aa19.68■□□□□ 0.74
MMP28-203ENST00000612672 M0QX08 132 aa19.67■□□□□ 0.74
MMP28-203ENST00000612672 ICMTO60725 284 aa19.67■□□□□ 0.74
MMP28-203ENST00000612672 GDI2P50395 445 aaKnown RBP19.67■□□□□ 0.74
MMP28-203ENST00000612672 CRYBA2P53672 197 aa19.67■□□□□ 0.74
MMP28-203ENST00000612672 TMEM155Q4W5P6 130 aa19.67■□□□□ 0.74
MMP28-203ENST00000612672 LRRC28Q86X40 367 aaPredicted RBP19.67■□□□□ 0.74
MMP28-203ENST00000612672 PARP8Q8N3A8 854 aa19.67■□□□□ 0.74
MMP28-203ENST00000612672 WFDC12Q8WWY7 111 aa19.67■□□□□ 0.74
MMP28-203ENST00000612672 EBF4Q9BQW3 602 aa19.67■□□□□ 0.74
MMP28-203ENST00000612672 MRI1Q9BV20 369 aa19.67■□□□□ 0.74
MMP28-203ENST00000612672 OR2H1Q9GZK4 316 aa19.67■□□□□ 0.74
MMP28-203ENST00000612672 MS4A7Q9GZW8 240 aaPredicted RBP19.67■□□□□ 0.74
MMP28-203ENST00000612672 EVA1AQ9H8M9 152 aa19.67■□□□□ 0.74
MMP28-203ENST00000612672 CYSLTR2Q9NS75 346 aa19.67■□□□□ 0.74
MMP28-203ENST00000612672 C20orf141Q9NUB4 165 aa19.67■□□□□ 0.74
MMP28-203ENST00000612672 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.67■□□□□ 0.74
MMP28-203ENST00000612672 ZDHHC8Q9ULC8 765 aa19.67■□□□□ 0.74
MMP28-203ENST00000612672 TRAPPC13A5PLN9 417 aa19.66■□□□□ 0.74
MMP28-203ENST00000612672 MCIDASD6RGH6 385 aa19.66■□□□□ 0.74
MMP28-203ENST00000612672 PLATP00750 562 aa19.66■□□□□ 0.74
MMP28-203ENST00000612672 ERFP50548 548 aa19.66■□□□□ 0.74
MMP28-203ENST00000612672 BTG1P62324 171 aa19.66■□□□□ 0.74
MMP28-203ENST00000612672 SGCAQ16586 387 aa19.66■□□□□ 0.74
MMP28-203ENST00000612672 ZNF774Q6NX45 483 aa19.66■□□□□ 0.74
MMP28-203ENST00000612672 SLC25A47Q6Q0C1 308 aa19.66■□□□□ 0.74
MMP28-203ENST00000612672 C9orf139Q6ZV77 190 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms