RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 HCRTR2O43614 444 aa13.23□□□□□ -0.29
CDH1-213ENST00000612417 GDF9O60383 454 aa13.23□□□□□ -0.29
CDH1-213ENST00000612417 TSPAN2O60636 221 aa13.23□□□□□ -0.29
CDH1-213ENST00000612417 ICMTO60725 284 aa13.23□□□□□ -0.29
CDH1-213ENST00000612417 CXCR1P25024 350 aa13.23□□□□□ -0.29
CDH1-213ENST00000612417 SELENOPP49908 381 aa13.23□□□□□ -0.29
CDH1-213ENST00000612417 IL11RAQ14626 422 aa13.23□□□□□ -0.29
CDH1-213ENST00000612417 HLA-DQA1Q5Y7H0 255 aa13.23□□□□□ -0.29
CDH1-213ENST00000612417 Q6ZTK2 550 aa13.23□□□□□ -0.29
CDH1-213ENST00000612417 NLRC3Q7RTR2 1065 aa13.23□□□□□ -0.29
CDH1-213ENST00000612417 ZNF676Q8N7Q3 588 aa13.23□□□□□ -0.29
CDH1-213ENST00000612417 PLPP5Q8NEB5 264 aa13.23□□□□□ -0.29
CDH1-213ENST00000612417 OR2T35Q8NGX2 323 aa13.23□□□□□ -0.29
CDH1-213ENST00000612417 NUDT9Q9BW91 350 aa13.23□□□□□ -0.29
CDH1-213ENST00000612417 TGIF2Q9GZN2 237 aa13.23□□□□□ -0.29
CDH1-213ENST00000612417 OR10A4Q9H209 315 aa13.23□□□□□ -0.29
CDH1-213ENST00000612417 METTL17Q9H7H0 456 aaPredicted RBP13.23□□□□□ -0.29
CDH1-213ENST00000612417 BEX1Q9HBH7 125 aa13.23□□□□□ -0.29
CDH1-213ENST00000612417 NOX3Q9HBY0 568 aa13.23□□□□□ -0.29
CDH1-213ENST00000612417 A0A1B0GTH9 108 aa13.22□□□□□ -0.29
CDH1-213ENST00000612417 TTLL8A6PVC2 850 aa13.22□□□□□ -0.29
CDH1-213ENST00000612417 ARPC1BO15143 372 aaKnown RBP13.22□□□□□ -0.29
CDH1-213ENST00000612417 NDUFB6O95139 128 aa13.22□□□□□ -0.29
CDH1-213ENST00000612417 IL5P05113 134 aa13.22□□□□□ -0.29
CDH1-213ENST00000612417 IFNGR1P15260 489 aa13.22□□□□□ -0.29
CDH1-213ENST00000612417 NAGAP17050 411 aa13.22□□□□□ -0.29
CDH1-213ENST00000612417 SDHBP21912 280 aa13.22□□□□□ -0.29
CDH1-213ENST00000612417 ACP1P24666 158 aa13.22□□□□□ -0.29
CDH1-213ENST00000612417 IL12BP29460 328 aa13.22□□□□□ -0.29
CDH1-213ENST00000612417 KIR3DL2P43630 455 aa13.22□□□□□ -0.29
CDH1-213ENST00000612417 CENPAP49450 140 aa13.22□□□□□ -0.29
CDH1-213ENST00000612417 B2MP61769 119 aa13.22□□□□□ -0.29
CDH1-213ENST00000612417 CBFBQ13951 182 aa13.22□□□□□ -0.29
CDH1-213ENST00000612417 SGCBQ16585 318 aa13.22□□□□□ -0.29
CDH1-213ENST00000612417 PLA2G2CQ5R387 149 aa13.22□□□□□ -0.29
CDH1-213ENST00000612417 MAMDC2Q7Z304 686 aaPredicted RBP13.22□□□□□ -0.29
CDH1-213ENST00000612417 PM20D2Q8IYS1 436 aa13.22□□□□□ -0.29
CDH1-213ENST00000612417 DNAAF1Q8NEP3 725 aa13.22□□□□□ -0.29
CDH1-213ENST00000612417 ZNF519Q8TB69 540 aa13.22□□□□□ -0.29
CDH1-213ENST00000612417 ASB17Q8WXJ9 295 aa13.22□□□□□ -0.29
CDH1-213ENST00000612417 OR8B4Q96RC9 309 aa13.22□□□□□ -0.29
CDH1-213ENST00000612417 ATPIF1Q9UII2 106 aa13.22□□□□□ -0.29
CDH1-213ENST00000612417 IGHV3-20A0A0C4DH32 117 aa13.22□□□□□ -0.29
CDH1-213ENST00000612417 SNRPGP15A8MWD9 76 aa13.22□□□□□ -0.29
CDH1-213ENST00000612417 H7C417 338 aa13.22□□□□□ -0.29
CDH1-213ENST00000612417 XKRYO14609 159 aa13.22□□□□□ -0.29
CDH1-213ENST00000612417 GALR2O43603 387 aaPredicted RBP13.22□□□□□ -0.29
CDH1-213ENST00000612417 NPIPB7O75200 414 aa13.22□□□□□ -0.29
CDH1-213ENST00000612417 GP1BAP07359 652 aa13.22□□□□□ -0.29
CDH1-213ENST00000612417 PGCP20142 388 aa13.22□□□□□ -0.29
CDH1-213ENST00000612417 DCTDP32321 178 aa13.22□□□□□ -0.29
CDH1-213ENST00000612417 BLVRAP53004 296 aa13.22□□□□□ -0.29
CDH1-213ENST00000612417 DHODHQ02127 395 aa13.22□□□□□ -0.29
CDH1-213ENST00000612417 ZFP36L1Q07352 338 aaKnown RBP13.22□□□□□ -0.29
CDH1-213ENST00000612417 LINC00303Q3SY05 128 aa13.22□□□□□ -0.29
CDH1-213ENST00000612417 WDR38Q5JTN6 314 aa13.22□□□□□ -0.29
CDH1-213ENST00000612417 DBX2Q6ZNG2 339 aa13.22□□□□□ -0.29
CDH1-213ENST00000612417 C9orf40Q8IXQ3 194 aa13.22□□□□□ -0.29
CDH1-213ENST00000612417 PRR22Q8IZ63 422 aa13.22□□□□□ -0.29
CDH1-213ENST00000612417 OR51A4Q8NGJ6 313 aa13.22□□□□□ -0.29
CDH1-213ENST00000612417 OR10AC1Q8NH08 325 aa13.22□□□□□ -0.29
CDH1-213ENST00000612417 THEM6Q8WUY1 208 aa13.22□□□□□ -0.29
CDH1-213ENST00000612417 METTL21AQ8WXB1 218 aa13.22□□□□□ -0.29
CDH1-213ENST00000612417 PTDSS2Q9BVG9 487 aa13.22□□□□□ -0.29
CDH1-213ENST00000612417 MTFP1Q9UDX5 166 aa13.22□□□□□ -0.29
CDH1-213ENST00000612417 KCNG2Q9UJ96 466 aa13.22□□□□□ -0.29
CDH1-213ENST00000612417 NOSIPQ9Y314 301 aaKnown RBP13.22□□□□□ -0.29
CDH1-213ENST00000612417 KMT2EQ8IZD2 1858 aa13.22□□□□□ -0.29
CDH1-213ENST00000612417 PRSS37A4D1T9 235 aa13.21□□□□□ -0.29
CDH1-213ENST00000612417 IFNA7P01567 189 aa13.21□□□□□ -0.29
CDH1-213ENST00000612417 MAS1P04201 325 aa13.21□□□□□ -0.29
CDH1-213ENST00000612417 FGF5P12034 268 aa13.21□□□□□ -0.29
CDH1-213ENST00000612417 CCL4P13236 92 aa13.21□□□□□ -0.29
CDH1-213ENST00000612417 ITPKBP27987 946 aa13.21□□□□□ -0.29
CDH1-213ENST00000612417 ZNF81P51508 661 aa13.21□□□□□ -0.29
CDH1-213ENST00000612417 SNTA1Q13424 505 aa13.21□□□□□ -0.29
CDH1-213ENST00000612417 TOMM34Q15785 309 aaPredicted RBP13.21□□□□□ -0.29
CDH1-213ENST00000612417 TEX30Q5JUR7 227 aa13.21□□□□□ -0.29
CDH1-213ENST00000612417 ZNF626Q68DY1 528 aa13.21□□□□□ -0.29
CDH1-213ENST00000612417 ANKRD16Q6P6B7 361 aa13.21□□□□□ -0.29
CDH1-213ENST00000612417 SLC29A4Q7RTT9 530 aa13.21□□□□□ -0.29
CDH1-213ENST00000612417 LINC00469Q8N7U9 141 aa13.21□□□□□ -0.29
CDH1-213ENST00000612417 OR1N1Q8NGS0 311 aa13.21□□□□□ -0.29
CDH1-213ENST00000612417 AMELYQ99218 206 aa13.21□□□□□ -0.29
CDH1-213ENST00000612417 NRSN2Q9GZP1 204 aa13.21□□□□□ -0.29
CDH1-213ENST00000612417 CLEC4MQ9H2X3 399 aaPredicted RBP13.21□□□□□ -0.29
CDH1-213ENST00000612417 VSX1Q9NZR4 365 aaPredicted RBP13.21□□□□□ -0.29
CDH1-213ENST00000612417 B9D1Q9UPM9 204 aa13.21□□□□□ -0.29
CDH1-213ENST00000612417 IGLV3-12A0A075B6K2 115 aa13.2□□□□□ -0.3
CDH1-213ENST00000612417 A0A1W2PQ72 361 aa13.2□□□□□ -0.3
CDH1-213ENST00000612417 CDC14CA4D256 554 aa13.2□□□□□ -0.3
CDH1-213ENST00000612417 B8ZZF3 427 aa13.2□□□□□ -0.3
CDH1-213ENST00000612417 MEN1O00255 615 aa13.2□□□□□ -0.3
CDH1-213ENST00000612417 MPC2O95563 127 aa13.2□□□□□ -0.3
CDH1-213ENST00000612417 IGHMP01871 453 aa13.2□□□□□ -0.3
CDH1-213ENST00000612417 GIPP09681 153 aaPredicted RBP13.2□□□□□ -0.3
CDH1-213ENST00000612417 TMIGD3P0DMS9 266 aaPredicted RBP13.2□□□□□ -0.3
CDH1-213ENST00000612417 PTHLHP12272 177 aa13.2□□□□□ -0.3
CDH1-213ENST00000612417 GP1BBP13224 206 aa13.2□□□□□ -0.3
CDH1-213ENST00000612417 FAUP35544 74 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms