RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 CMTM3Q96MX0 182 aa7.87□□□□□ -1.15
LIG4-204ENST00000611712 NUDT9Q9BW91 350 aa7.87□□□□□ -1.15
LIG4-204ENST00000611712 C1orf198Q9H425 327 aa7.87□□□□□ -1.15
LIG4-204ENST00000611712 DLL4Q9NR61 685 aa7.87□□□□□ -1.15
LIG4-204ENST00000611712 HPF1Q9NWY4 346 aa7.87□□□□□ -1.15
LIG4-204ENST00000611712 FOXJ3Q9UPW0 622 aa7.87□□□□□ -1.15
LIG4-204ENST00000611712 ANAPC1Q9H1A4 1944 aa7.87□□□□□ -1.15
LIG4-204ENST00000611712 LOC107986453A0A1B0GWG9 222 aa7.87□□□□□ -1.15
LIG4-204ENST00000611712 A0A1B0GX78 115 aa7.87□□□□□ -1.15
LIG4-204ENST00000611712 FRG2CA6NGY1 282 aa7.87□□□□□ -1.15
LIG4-204ENST00000611712 PYCARD-AS1I3L0S3 204 aa7.87□□□□□ -1.15
LIG4-204ENST00000611712 APEHP13798 732 aaKnown RBP7.87□□□□□ -1.15
LIG4-204ENST00000611712 RBMXP38159 391 aaKnown RBP7.87□□□□□ -1.15
LIG4-204ENST00000611712 SEC61A1P61619 476 aaKnown RBP7.87□□□□□ -1.15
LIG4-204ENST00000611712 DLX2Q07687 328 aaPredicted RBP7.87□□□□□ -1.15
LIG4-204ENST00000611712 EIF5AL1Q6IS14 154 aaKnown RBP7.87□□□□□ -1.15
LIG4-204ENST00000611712 C5orf46Q6UWT4 87 aa7.87□□□□□ -1.15
LIG4-204ENST00000611712 ADGRE4PQ86SQ3 457 aa7.87□□□□□ -1.15
LIG4-204ENST00000611712 SPAG16Q8N0X2 631 aa7.87□□□□□ -1.15
LIG4-204ENST00000611712 OR5H2Q8NGV7 314 aa7.87□□□□□ -1.15
LIG4-204ENST00000611712 RBPMSQ93062 196 aaKnown RBP7.87□□□□□ -1.15
LIG4-204ENST00000611712 SCMH1Q96GD3 660 aa7.87□□□□□ -1.15
LIG4-204ENST00000611712 JAM3Q9BX67 310 aa7.87□□□□□ -1.15
LIG4-204ENST00000611712 CHMP1AQ9HD42 196 aaPredicted RBP7.87□□□□□ -1.15
LIG4-204ENST00000611712 MRM2Q9UI43 246 aaKnown RBP7.87□□□□□ -1.15
LIG4-204ENST00000611712 ZMIZ1Q9ULJ6 1067 aa7.87□□□□□ -1.15
LIG4-204ENST00000611712 HIF3AQ9Y2N7 669 aa7.87□□□□□ -1.15
LIG4-204ENST00000611712 RNF215Q9Y6U7 377 aa7.87□□□□□ -1.15
LIG4-204ENST00000611712 TMEM235A6NFC5 223 aa7.87□□□□□ -1.15
LIG4-204ENST00000611712 SULT2B1O00204 365 aa7.87□□□□□ -1.15
LIG4-204ENST00000611712 XRCC3O43542 346 aa7.87□□□□□ -1.15
LIG4-204ENST00000611712 SCGNO76038 276 aa7.87□□□□□ -1.15
LIG4-204ENST00000611712 HPXP02790 462 aa7.87□□□□□ -1.15
LIG4-204ENST00000611712 ITGA3P26006 1051 aa7.87□□□□□ -1.15
LIG4-204ENST00000611712 ZNF117Q03924 483 aa7.87□□□□□ -1.15
LIG4-204ENST00000611712 BTN1A1Q13410 526 aa7.87□□□□□ -1.15
LIG4-204ENST00000611712 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.87□□□□□ -1.15
LIG4-204ENST00000611712 WDR38Q5JTN6 314 aa7.87□□□□□ -1.15
LIG4-204ENST00000611712 PWWP2BQ6NUJ5 590 aa7.87□□□□□ -1.15
LIG4-204ENST00000611712 SLC25A24Q6NUK1 477 aa7.87□□□□□ -1.15
LIG4-204ENST00000611712 H1FNTQ75WM6 255 aaPredicted RBP7.87□□□□□ -1.15
LIG4-204ENST00000611712 PXKQ7Z7A4 578 aa7.87□□□□□ -1.15
LIG4-204ENST00000611712 C9orf62Q8N4C0 152 aa7.87□□□□□ -1.15
LIG4-204ENST00000611712 OTOSQ8NHW6 89 aa7.87□□□□□ -1.15
LIG4-204ENST00000611712 HOXB13Q92826 284 aaPredicted RBP7.87□□□□□ -1.15
LIG4-204ENST00000611712 PGLYRP3Q96LB9 341 aa7.87□□□□□ -1.15
LIG4-204ENST00000611712 SLC25A21Q9BQT8 299 aaPredicted RBP7.87□□□□□ -1.15
LIG4-204ENST00000611712 ABHD6Q9BV23 337 aa7.87□□□□□ -1.15
LIG4-204ENST00000611712 ST6GALNAC5Q9BVH7 336 aa7.87□□□□□ -1.15
LIG4-204ENST00000611712 RBM24Q9BX46 236 aaKnown RBP7.87□□□□□ -1.15
LIG4-204ENST00000611712 PRRG4Q9BZD6 226 aa7.87□□□□□ -1.15
LIG4-204ENST00000611712 TXNIPQ9H3M7 391 aa7.87□□□□□ -1.15
LIG4-204ENST00000611712 VSX1Q9NZR4 365 aaPredicted RBP7.87□□□□□ -1.15
LIG4-204ENST00000611712 ICAM5Q9UMF0 924 aa7.87□□□□□ -1.15
LIG4-204ENST00000611712 DNAH12Q6ZR08 3092 aa7.87□□□□□ -1.15
LIG4-204ENST00000611712 BCAT2O15382 392 aaPredicted RBP7.86□□□□□ -1.15
LIG4-204ENST00000611712 TRAPPC6AO75865 159 aa7.86□□□□□ -1.15
LIG4-204ENST00000611712 SCO1O75880 301 aa7.86□□□□□ -1.15
LIG4-204ENST00000611712 IGHG1P01857 330 aa7.86□□□□□ -1.15
LIG4-204ENST00000611712 NGFRP08138 427 aa7.86□□□□□ -1.15
LIG4-204ENST00000611712 SLC2A1P11166 492 aa7.86□□□□□ -1.15
LIG4-204ENST00000611712 GPR3P46089 330 aa7.86□□□□□ -1.15
LIG4-204ENST00000611712 SGCBQ16585 318 aa7.86□□□□□ -1.15
LIG4-204ENST00000611712 TOR2AQ5JU69 321 aa7.86□□□□□ -1.15
LIG4-204ENST00000611712 CLVS2Q5SYC1 327 aa7.86□□□□□ -1.15
LIG4-204ENST00000611712 FHL5Q5TD97 284 aa7.86□□□□□ -1.15
LIG4-204ENST00000611712 C1QL3Q5VWW1 255 aa7.86□□□□□ -1.15
LIG4-204ENST00000611712 LYPD8Q6UX82 237 aa7.86□□□□□ -1.15
LIG4-204ENST00000611712 CHRDL2Q6WN34 429 aa7.86□□□□□ -1.15
LIG4-204ENST00000611712 RFPL4BQ6ZWI9 263 aa7.86□□□□□ -1.15
LIG4-204ENST00000611712 GABRG1Q8N1C3 465 aa7.86□□□□□ -1.15
LIG4-204ENST00000611712 TSPAN32Q96QS1 320 aa7.86□□□□□ -1.15
LIG4-204ENST00000611712 OR8B4Q96RC9 309 aa7.86□□□□□ -1.15
LIG4-204ENST00000611712 TSNAXQ99598 290 aaKnown RBP7.86□□□□□ -1.15
LIG4-204ENST00000611712 BCL2L14Q9BZR8 327 aa7.86□□□□□ -1.15
LIG4-204ENST00000611712 POFUT1Q9H488 388 aa7.86□□□□□ -1.15
LIG4-204ENST00000611712 MED29Q9NX70 200 aa7.86□□□□□ -1.15
LIG4-204ENST00000611712 MLXQ9UH92 298 aa7.86□□□□□ -1.15
LIG4-204ENST00000611712 CEP350Q5VT06 3117 aa7.86□□□□□ -1.15
LIG4-204ENST00000611712 SNRPGP15A8MWD9 76 aa7.86□□□□□ -1.15
LIG4-204ENST00000611712 ZFAND5O76080 213 aa7.86□□□□□ -1.15
LIG4-204ENST00000611712 GLSO94925 669 aaPredicted RBP7.86□□□□□ -1.15
LIG4-204ENST00000611712 HLA-DQB1P01920 261 aa7.86□□□□□ -1.15
LIG4-204ENST00000611712 LPLP06858 475 aa7.86□□□□□ -1.15
LIG4-204ENST00000611712 CSNK2A1P68400 391 aaPredicted RBP7.86□□□□□ -1.15
LIG4-204ENST00000611712 TMEM176BQ3YBM2 270 aaPredicted RBP7.86□□□□□ -1.15
LIG4-204ENST00000611712 GLDNQ6ZMI3 551 aaPredicted RBP7.86□□□□□ -1.15
LIG4-204ENST00000611712 TMUB2Q71RG4 321 aa7.86□□□□□ -1.15
LIG4-204ENST00000611712 MISPQ8IVT2 679 aa7.86□□□□□ -1.15
LIG4-204ENST00000611712 CSNK2A3Q8NEV1 391 aa7.86□□□□□ -1.15
LIG4-204ENST00000611712 GPR119Q8TDV5 335 aa7.86□□□□□ -1.15
LIG4-204ENST00000611712 PNPLA2Q96AD5 504 aa7.86□□□□□ -1.15
LIG4-204ENST00000611712 C4orf45Q96LM5 186 aa7.86□□□□□ -1.15
LIG4-204ENST00000611712 S1PR5Q9H228 398 aa7.86□□□□□ -1.15
LIG4-204ENST00000611712 ZNF576Q9H609 170 aa7.86□□□□□ -1.15
LIG4-204ENST00000611712 NUP50Q9UKX7 468 aa7.86□□□□□ -1.15
LIG4-204ENST00000611712 A0A0B4J293 547 aa7.86□□□□□ -1.15
LIG4-204ENST00000611712 LILRA5A6NI73 299 aa7.86□□□□□ -1.15
LIG4-204ENST00000611712 C2CD4DB7Z1M9 353 aa7.86□□□□□ -1.15
LIG4-204ENST00000611712 FOXS1O43638 330 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms