RNA–Protein interactions for RNA: ENST00000607931.1

LINC00963-209, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 473 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-209ENST00000607931 MMP15P51511 669 aa7.04□□□□□ -1.28
LINC00963-209ENST00000607931 POLR2JP52435 117 aaKnown RBP7.04□□□□□ -1.28
LINC00963-209ENST00000607931 CDH12P55289 794 aa7.04□□□□□ -1.28
LINC00963-209ENST00000607931 MELKQ14680 651 aa7.04□□□□□ -1.28
LINC00963-209ENST00000607931 PDCD1Q15116 288 aa7.04□□□□□ -1.28
LINC00963-209ENST00000607931 KLF17Q5JT82 389 aaPredicted RBP7.04□□□□□ -1.28
LINC00963-209ENST00000607931 SPATA46Q5T0L3 261 aa7.04□□□□□ -1.28
LINC00963-209ENST00000607931 THEM4Q5T1C6 240 aa7.04□□□□□ -1.28
LINC00963-209ENST00000607931 MBNL2Q5VZF2 373 aaKnown RBP7.04□□□□□ -1.28
LINC00963-209ENST00000607931 FAM205BPQ63HN1 556 aa7.04□□□□□ -1.28
LINC00963-209ENST00000607931 REEP3Q6NUK4 255 aa7.04□□□□□ -1.28
LINC00963-209ENST00000607931 TTC33Q6PID6 262 aaPredicted RBP7.04□□□□□ -1.28
LINC00963-209ENST00000607931 LRFN4Q6PJG9 635 aa7.04□□□□□ -1.28
LINC00963-209ENST00000607931 LRRN1Q6UXK5 716 aa7.04□□□□□ -1.28
LINC00963-209ENST00000607931 LINC00114Q6XXX2 140 aa7.04□□□□□ -1.28
LINC00963-209ENST00000607931 WDR88Q6ZMY6 472 aa7.04□□□□□ -1.28
LINC00963-209ENST00000607931 MUC20Q8N307 709 aaPredicted RBP7.04□□□□□ -1.28
LINC00963-209ENST00000607931 NFKBIDQ8NI38 313 aa7.04□□□□□ -1.28
LINC00963-209ENST00000607931 KLF14Q8TD94 323 aaPredicted RBP7.04□□□□□ -1.28
LINC00963-209ENST00000607931 IPCEF1Q8WWN9 437 aaPredicted RBP7.04□□□□□ -1.28
LINC00963-209ENST00000607931 GTF3AQ92664 365 aaKnown RBP7.04□□□□□ -1.28
LINC00963-209ENST00000607931 VPS33AQ96AX1 596 aa7.04□□□□□ -1.28
LINC00963-209ENST00000607931 THOC1Q96FV9 657 aaKnown RBP7.04□□□□□ -1.28
LINC00963-209ENST00000607931 C1orf147Q96MC9 270 aaPredicted RBP7.04□□□□□ -1.28
LINC00963-209ENST00000607931 SORT1Q99523 831 aa7.04□□□□□ -1.28
LINC00963-209ENST00000607931 PKP2Q99959 881 aa7.04□□□□□ -1.28
LINC00963-209ENST00000607931 PAIP2Q9BPZ3 127 aaKnown RBP7.04□□□□□ -1.28
LINC00963-209ENST00000607931 SLC30A2Q9BRI3 323 aa7.04□□□□□ -1.28
LINC00963-209ENST00000607931 C20orf27Q9GZN8 174 aa7.04□□□□□ -1.28
LINC00963-209ENST00000607931 ELOVL3Q9HB03 270 aa7.04□□□□□ -1.28
LINC00963-209ENST00000607931 PATZ1Q9HBE1 687 aaKnown RBP7.04□□□□□ -1.28
LINC00963-209ENST00000607931 MMP26Q9NRE1 261 aa7.04□□□□□ -1.28
LINC00963-209ENST00000607931 TMEM106BQ9NUM4 274 aa7.04□□□□□ -1.28
LINC00963-209ENST00000607931 PNPOQ9NVS9 261 aa7.04□□□□□ -1.28
LINC00963-209ENST00000607931 ZIM2Q9NZV7 527 aa7.04□□□□□ -1.28
LINC00963-209ENST00000607931 ARMCX1Q9P291 453 aa7.04□□□□□ -1.28
LINC00963-209ENST00000607931 STX18Q9P2W9 335 aaKnown RBP7.04□□□□□ -1.28
LINC00963-209ENST00000607931 TENM1Q9UKZ4 2725 aa7.04□□□□□ -1.28
LINC00963-209ENST00000607931 A0A1W2PRG6 482 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 GMNCA6NCL1 334 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 ZSCAN5BA6NJL1 495 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 A8MXK9 166 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 TRAPPC2LH3BP13 241 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 H3BSA7 217 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 SDHDO14521 159 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 RGS16O15492 202 aaPredicted RBP7.03□□□□□ -1.28
LINC00963-209ENST00000607931 HOXA3O43365 443 aaPredicted RBP7.03□□□□□ -1.28
LINC00963-209ENST00000607931 CHP2O43745 196 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 ZNF500O60304 480 aaPredicted RBP7.03□□□□□ -1.28
LINC00963-209ENST00000607931 EIF4EBP3O60516 100 aaPredicted RBP7.03□□□□□ -1.28
LINC00963-209ENST00000607931 FMO6PO60774 539 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 HTR3BO95264 441 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 IGHV2-70P01814 119 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 CD55P08174 381 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 PGA4P0DJD7 388 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 PGA3P0DJD8 388 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 PPIAL4GP0DN37 164 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 GSTM3P21266 225 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 BGNP21810 368 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 CPT2P23786 658 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 SLC6A2P23975 617 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 RAG2P55895 527 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 BTG1P62324 171 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 CDK6Q00534 326 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 TAF11Q15544 211 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 GTDC1Q4AE62 458 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 TTMPQ5BVD1 217 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 MTX3Q5HYI7 312 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 PABPC1L2AQ5JQF8 200 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 GCNT6Q5T4J0 391 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 HHATQ5VTY9 493 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 ZNF613Q6PF04 617 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 C9orf139Q6ZV77 190 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 NANOGNBQ7Z5D8 188 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 ARMC8Q8IUR7 673 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 KIR3DL3Q8N743 410 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 NOXO1Q8NFA2 376 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 ABHD4Q8TB40 342 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 SLC25A40Q8TBP6 338 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 WFDC12Q8WWY7 111 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 GEMIN6Q8WXD5 167 aaKnown RBP7.03□□□□□ -1.28
LINC00963-209ENST00000607931 MCHR2Q969V1 340 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 MARS2Q96GW9 593 aaKnown RBP7.03□□□□□ -1.28
LINC00963-209ENST00000607931 PLEKHA8Q96JA3 519 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 MAGEB18Q96M61 343 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 ZNF48Q96MX3 618 aaPredicted RBP7.03□□□□□ -1.28
LINC00963-209ENST00000607931 SSBP3Q9BWW4 388 aaPredicted RBP7.03□□□□□ -1.28
LINC00963-209ENST00000607931 OR2J1Q9GZK6 312 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 WDR55Q9H6Y2 383 aaPredicted RBP7.03□□□□□ -1.28
LINC00963-209ENST00000607931 SIAEQ9HAT2 523 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 SSU72Q9NP77 194 aaKnown RBP7.03□□□□□ -1.28
LINC00963-209ENST00000607931 SLCO1B3Q9NPD5 702 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 KIF17Q9P2E2 1029 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 ZNF229Q9UJW7 825 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 CORO2BQ9UQ03 480 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 LRCH1Q9Y2L9 728 aa7.03□□□□□ -1.28
LINC00963-209ENST00000607931 IGHV3OR16-10A0A075B7F0 116 aa7.02□□□□□ -1.29
LINC00963-209ENST00000607931 TRAV40A0A0B4J280 105 aa7.02□□□□□ -1.29
LINC00963-209ENST00000607931 B2RBV5 119 aa7.02□□□□□ -1.29
LINC00963-209ENST00000607931 CENPBD1B2RD01 187 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms