RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 ZNF426Q9BUY5 554 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 BOCQ9BWV1 1114 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 HAPLN2Q9GZV7 340 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 TMEM231Q9H6L2 316 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 SLC52A3Q9NQ40 469 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 SDR39U1Q9NRG7 319 aaPredicted RBP4.28□□□□□ -1.72
LINC01109-201ENST00000603837 UQCC1Q9NVA1 299 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 NDUFB11Q9NX14 153 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 SLC25A10Q9UBX3 287 aaPredicted RBP4.28□□□□□ -1.72
LINC01109-201ENST00000603837 FBXW11Q9UKB1 542 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 FLVCR2Q9UPI3 526 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 COL2A1P02458 1487 aaPredicted RBP4.28□□□□□ -1.72
LINC01109-201ENST00000603837 PHIPQ8WWQ0 1821 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 LOC285095A0A1B0GVY8 99 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 OR2M5A3KFT3 312 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 CPED1A4D0V7 1026 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 OR5H15A6NDH6 313 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 OR5H1A6NKK0 313 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 TRDCB7Z8K6 153 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 ZNF587BE7ETH6 402 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 K7EP13 123 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 CLIC1O00299 241 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 PPP1R2P9O14990 202 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 ENSAO43768 121 aaKnown RBP4.28□□□□□ -1.72
LINC01109-201ENST00000603837 SLC19A2O60779 497 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 PRAF2O60831 178 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 PPP1R11O60927 126 aaPredicted RBP4.28□□□□□ -1.72
LINC01109-201ENST00000603837 LEFTY1O75610 366 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 SLC25A12O75746 678 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 OR2J2O76002 312 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 BCHEP06276 602 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 NBEAP1P0C6P0 100 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 PET100P0DJ07 73 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 MGMTP16455 207 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 SDHBP21912 280 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 MPGP29372 298 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 KHKP50053 298 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 NOVA1P51513 510 aaKnown RBP4.28□□□□□ -1.72
LINC01109-201ENST00000603837 ZNF140P52738 457 aaPredicted RBP4.28□□□□□ -1.72
LINC01109-201ENST00000603837 RAP1BP61224 184 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 RAB31Q13636 194 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 SLC22A6Q4U2R8 563 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 SLC25A53Q5H9E4 307 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 OR2T5Q6IEZ7 315 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 OR8G2PQ6IF36 304 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 INO80CQ6PI98 192 aaPredicted RBP4.28□□□□□ -1.72
LINC01109-201ENST00000603837 FIGLAQ6QHK4 219 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 Q6ZPB1 254 aaPredicted RBP4.28□□□□□ -1.72
LINC01109-201ENST00000603837 RPS27LQ71UM5 84 aaKnown RBP4.28□□□□□ -1.72
LINC01109-201ENST00000603837 TMEM144Q7Z5S9 345 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 C5orf24Q7Z6I8 188 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 TRAPPC5Q8IUR0 188 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 BPIFB2Q8N4F0 458 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 CSNK1A1LQ8N752 337 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 ZNF610Q8N9Z0 462 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 LRRC75AQ8NAA5 344 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 MFSD9Q8NBP5 474 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 ACVR1CQ8NER5 493 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 OR2T29Q8NH02 315 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 OR4K15Q8NH41 348 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 OR52P1PQ8NH57 321 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 PIH1D2Q8WWB5 315 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 LHX4Q969G2 390 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 SLC41A3Q96GZ6 507 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 AKR1E2Q96JD6 320 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 LAT2Q9GZY6 243 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 XYLT2Q9H1B5 865 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 MTHFD2LQ9H903 347 aaPredicted RBP4.28□□□□□ -1.72
LINC01109-201ENST00000603837 CA10Q9NS85 328 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 NXT1Q9UKK6 140 aaKnown RBP4.28□□□□□ -1.72
LINC01109-201ENST00000603837 PARP14Q460N5 1801 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 DOCK5Q9H7D0 1870 aa4.28□□□□□ -1.72
LINC01109-201ENST00000603837 LOC102724200A0A096LPH7 203 aaPredicted RBP4.27□□□□□ -1.73
LINC01109-201ENST00000603837 SMCO3A2RU48 225 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 OOEPA6NGQ2 149 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 CASKO14936 926 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 TPST2O60704 377 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 HGFP14210 728 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 HOXB6P17509 224 aaKnown RBP4.27□□□□□ -1.73
LINC01109-201ENST00000603837 PSMB4P28070 264 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 NTSR1P30989 418 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 IL2RGP31785 369 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 PRDX2P32119 198 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 IFNGR2P38484 337 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 BLKP51451 505 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 CNN1P51911 297 aaKnown RBP4.27□□□□□ -1.73
LINC01109-201ENST00000603837 HMGCS2P54868 508 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 FKBP1AP62942 108 aaKnown RBP4.27□□□□□ -1.73
LINC01109-201ENST00000603837 SPHARQ15513 63 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 GUK1Q16774 197 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 ATP6V1FQ16864 119 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 QRICH1Q2TAL8 776 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 C5orf47Q569G3 176 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 PDZD11Q5EBL8 140 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 FAM219BQ5XKK7 198 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 OR10K2Q6IF99 312 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 UBE3DQ7Z6J8 389 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 ATG4DQ86TL0 474 aaPredicted RBP4.27□□□□□ -1.73
LINC01109-201ENST00000603837 CXorf67Q86X51 503 aaPredicted RBP4.27□□□□□ -1.73
LINC01109-201ENST00000603837 C1QL4Q86Z23 238 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms