RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 DLX5P56178 289 aa18.2■□□□□ 0.5
SHKBP1-225ENST00000600733 ARHGAP40Q5TG30 622 aa18.2■□□□□ 0.5
SHKBP1-225ENST00000600733 TMEM225Q6GV28 225 aa18.2■□□□□ 0.5
SHKBP1-225ENST00000600733 ADGRG3Q86Y34 549 aa18.2■□□□□ 0.5
SHKBP1-225ENST00000600733 CPAMD8Q8IZJ3 1885 aa18.2■□□□□ 0.5
SHKBP1-225ENST00000600733 KDM8Q8N371 416 aa18.2■□□□□ 0.5
SHKBP1-225ENST00000600733 ASB17Q8WXJ9 295 aa18.2■□□□□ 0.5
SHKBP1-225ENST00000600733 C1QTNF6Q9BXI9 259 aa18.2■□□□□ 0.5
SHKBP1-225ENST00000600733 WWTR1Q9GZV5 400 aa18.2■□□□□ 0.5
SHKBP1-225ENST00000600733 CHST6Q9GZX3 395 aa18.2■□□□□ 0.5
SHKBP1-225ENST00000600733 COQ3Q9NZJ6 369 aa18.2■□□□□ 0.5
SHKBP1-225ENST00000600733 DHDHQ9UQ10 334 aa18.2■□□□□ 0.5
SHKBP1-225ENST00000600733 TCRBV16S1A1N1A0A5B0 115 aa18.19■□□□□ 0.5
SHKBP1-225ENST00000600733 MT-ATP6P00846 226 aa18.19■□□□□ 0.5
SHKBP1-225ENST00000600733 ZNF35P13682 527 aa18.19■□□□□ 0.5
SHKBP1-225ENST00000600733 C4BPBP20851 252 aa18.19■□□□□ 0.5
SHKBP1-225ENST00000600733 DCAF12L2Q5VW00 463 aa18.19■□□□□ 0.5
SHKBP1-225ENST00000600733 FAM166AQ6J272 317 aa18.19■□□□□ 0.5
SHKBP1-225ENST00000600733 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.19■□□□□ 0.5
SHKBP1-225ENST00000600733 ASB5Q8WWX0 329 aa18.19■□□□□ 0.5
SHKBP1-225ENST00000600733 ABHD6Q9BV23 337 aa18.19■□□□□ 0.5
SHKBP1-225ENST00000600733 TMPRSS13Q9BYE2 586 aa18.19■□□□□ 0.5
SHKBP1-225ENST00000600733 TXNIPQ9H3M7 391 aa18.19■□□□□ 0.5
SHKBP1-225ENST00000600733 RDH8Q9NYR8 311 aa18.19■□□□□ 0.5
SHKBP1-225ENST00000600733 TAS2R4Q9NYW5 299 aa18.19■□□□□ 0.5
SHKBP1-225ENST00000600733 UNC13CQ8NB66 2214 aa18.19■□□□□ 0.5
SHKBP1-225ENST00000600733 IGHV1OR15-9A0A0B4J2B8 117 aa18.19■□□□□ 0.5
SHKBP1-225ENST00000600733 SLC22A23A1A5C7 686 aa18.19■□□□□ 0.5
SHKBP1-225ENST00000600733 GOSR2O14653 212 aa18.19■□□□□ 0.5
SHKBP1-225ENST00000600733 EIF4E2O60573 245 aaKnown RBP18.19■□□□□ 0.5
SHKBP1-225ENST00000600733 NPIPB7O75200 414 aa18.19■□□□□ 0.5
SHKBP1-225ENST00000600733 M6PRP20645 277 aa18.19■□□□□ 0.5
SHKBP1-225ENST00000600733 CD38P28907 300 aa18.19■□□□□ 0.5
SHKBP1-225ENST00000600733 FOXL2P58012 376 aa18.19■□□□□ 0.5
SHKBP1-225ENST00000600733 SEC61A1P61619 476 aaKnown RBP18.19■□□□□ 0.5
SHKBP1-225ENST00000600733 ROM1Q03395 351 aa18.19■□□□□ 0.5
SHKBP1-225ENST00000600733 EIF2B1Q14232 305 aaKnown RBP18.19■□□□□ 0.5
SHKBP1-225ENST00000600733 C1orf140Q5VVS0 124 aa18.19■□□□□ 0.5
SHKBP1-225ENST00000600733 CLEC1AQ8NC01 280 aa18.19■□□□□ 0.5
SHKBP1-225ENST00000600733 PNPLA2Q96AD5 504 aa18.19■□□□□ 0.5
SHKBP1-225ENST00000600733 ZDHHC12Q96GR4 267 aa18.19■□□□□ 0.5
SHKBP1-225ENST00000600733 ZNF587Q96SQ5 575 aaPredicted RBP18.19■□□□□ 0.5
SHKBP1-225ENST00000600733 EPHA6Q9UF33 1036 aa18.19■□□□□ 0.5
SHKBP1-225ENST00000600733 LRP12Q9Y561 859 aa18.19■□□□□ 0.5
SHKBP1-225ENST00000600733 SDK1Q7Z5N4 2213 aa18.18■□□□□ 0.5
SHKBP1-225ENST00000600733 TEX51A0A1B0GUA7 166 aa18.18■□□□□ 0.5
SHKBP1-225ENST00000600733 DXOO77932 396 aaKnown RBP18.18■□□□□ 0.5
SHKBP1-225ENST00000600733 HLA-DOBP13765 273 aa18.18■□□□□ 0.5
SHKBP1-225ENST00000600733 POLR2HP52434 150 aaKnown RBP18.18■□□□□ 0.5
SHKBP1-225ENST00000600733 DCAF7P61962 342 aa18.18■□□□□ 0.5
SHKBP1-225ENST00000600733 C1orf189Q5VU69 101 aa18.18■□□□□ 0.5
SHKBP1-225ENST00000600733 TMEM65Q6PI78 240 aa18.18■□□□□ 0.5
SHKBP1-225ENST00000600733 OR2AK2Q8NG84 335 aa18.18■□□□□ 0.5
SHKBP1-225ENST00000600733 OR1L3Q8NH93 324 aa18.18■□□□□ 0.5
SHKBP1-225ENST00000600733 VSX1Q9NZR4 365 aaPredicted RBP18.18■□□□□ 0.5
SHKBP1-225ENST00000600733 CGGBP1Q9UFW8 167 aaPredicted RBP18.18■□□□□ 0.5
SHKBP1-225ENST00000600733 KCNN3Q9UGI6 736 aa18.18■□□□□ 0.5
SHKBP1-225ENST00000600733 NUP50Q9UKX7 468 aa18.18■□□□□ 0.5
SHKBP1-225ENST00000600733 FER1L5A0AVI2 2057 aa18.18■□□□□ 0.5
SHKBP1-225ENST00000600733 A0A1W2PQD3 144 aa18.18■□□□□ 0.5
SHKBP1-225ENST00000600733 B8ZZF3 427 aa18.18■□□□□ 0.5
SHKBP1-225ENST00000600733 IL11P20809 199 aa18.18■□□□□ 0.5
SHKBP1-225ENST00000600733 RIDAP52758 137 aaKnown RBP18.18■□□□□ 0.5
SHKBP1-225ENST00000600733 GLYATL3Q5SZD4 288 aa18.18■□□□□ 0.5
SHKBP1-225ENST00000600733 STEAP1BQ6NZ63 245 aa18.18■□□□□ 0.5
SHKBP1-225ENST00000600733 TMEM205Q6UW68 189 aa18.18■□□□□ 0.5
SHKBP1-225ENST00000600733 C17orf82Q86X59 251 aaPredicted RBP18.18■□□□□ 0.5
SHKBP1-225ENST00000600733 OR51A2Q8NGJ7 313 aa18.18■□□□□ 0.5
SHKBP1-225ENST00000600733 TNFAIP8L1Q8WVP5 186 aa18.18■□□□□ 0.5
SHKBP1-225ENST00000600733 THRSPQ92748 146 aa18.18■□□□□ 0.5
SHKBP1-225ENST00000600733 SLC25A28Q96A46 364 aa18.18■□□□□ 0.5
SHKBP1-225ENST00000600733 WBP1Q96G27 269 aa18.18■□□□□ 0.5
SHKBP1-225ENST00000600733 EXO5Q9H790 373 aa18.18■□□□□ 0.5
SHKBP1-225ENST00000600733 TMEM138Q9NPI0 162 aa18.18■□□□□ 0.5
SHKBP1-225ENST00000600733 MYEF2Q9P2K5 600 aaKnown RBP18.18■□□□□ 0.5
SHKBP1-225ENST00000600733 COA3Q9Y2R0 106 aaPredicted RBP18.18■□□□□ 0.5
SHKBP1-225ENST00000600733 FXYD6-FXYD2A0A087WZ82 144 aa18.17■□□□□ 0.5
SHKBP1-225ENST00000600733 A0A1W2PR77 199 aa18.17■□□□□ 0.5
SHKBP1-225ENST00000600733 PLPP3O14495 311 aa18.17■□□□□ 0.5
SHKBP1-225ENST00000600733 OR1D5P58170 312 aa18.17■□□□□ 0.5
SHKBP1-225ENST00000600733 SQSTM1Q13501 440 aa18.17■□□□□ 0.5
SHKBP1-225ENST00000600733 HLXQ14774 488 aaPredicted RBP18.17■□□□□ 0.5
SHKBP1-225ENST00000600733 MFSD13AQ14CX5 517 aa18.17■□□□□ 0.5
SHKBP1-225ENST00000600733 WDR45BQ5MNZ6 344 aa18.17■□□□□ 0.5
SHKBP1-225ENST00000600733 KCTD18Q6PI47 426 aaPredicted RBP18.17■□□□□ 0.5
SHKBP1-225ENST00000600733 CATSPERDQ86XM0 798 aa18.17■□□□□ 0.5
SHKBP1-225ENST00000600733 TSTD1Q8NFU3 115 aa18.17■□□□□ 0.5
SHKBP1-225ENST00000600733 DUSP19Q8WTR2 217 aa18.17■□□□□ 0.5
SHKBP1-225ENST00000600733 RBPMSQ93062 196 aaKnown RBP18.17■□□□□ 0.5
SHKBP1-225ENST00000600733 CHRNA10Q9GZZ6 450 aa18.17■□□□□ 0.5
SHKBP1-225ENST00000600733 FXYD6Q9H0Q3 95 aa18.17■□□□□ 0.5
SHKBP1-225ENST00000600733 SPEF1Q9Y4P9 236 aa18.17■□□□□ 0.5
SHKBP1-225ENST00000600733 RHPN2P1A8MT19 583 aa18.16■□□□□ 0.5
SHKBP1-225ENST00000600733 A8MVM7 634 aa18.16■□□□□ 0.5
SHKBP1-225ENST00000600733 ACSM4P0C7M7 580 aa18.16■□□□□ 0.5
SHKBP1-225ENST00000600733 HOXD11P31277 338 aaPredicted RBP18.16■□□□□ 0.5
SHKBP1-225ENST00000600733 S100A11P31949 105 aa18.16■□□□□ 0.5
SHKBP1-225ENST00000600733 C4orf46Q504U0 113 aa18.16■□□□□ 0.5
SHKBP1-225ENST00000600733 SMUG1Q53HV7 270 aa18.16■□□□□ 0.5
SHKBP1-225ENST00000600733 ALKAL2Q6UX46 152 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms