RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 PPIAL4GP0DN37 164 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 ACADSP16219 412 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 ZNF32P17041 273 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 CD247P20963 164 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 STOMP27105 288 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 CDAP32320 146 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 LIPAP38571 399 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 CRYBA2P53672 197 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 RELBQ01201 579 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 PLP2Q04941 152 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 SLC3A1Q07837 685 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 PSG7Q13046 419 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 SCARB2Q14108 478 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 ZMYND11Q15326 602 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 ENTPD8Q5MY95 495 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 FAM27BQ5VT28 67 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 NXNQ6DKJ4 435 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 ZNF774Q6NX45 483 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 WDR93Q6P2C0 686 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 C16orf87Q6PH81 154 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 EPGNQ6UW88 154 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 RBMS3Q6XE24 437 aaKnown RBP5.13□□□□□ -1.59
VRK3-220ENST00000600259 FOXL2NBQ6ZUU3 175 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 RFPL4BQ6ZWI9 263 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 JAZF1Q86VZ6 243 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 KRT73Q86Y46 540 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 TREML1Q86YW5 311 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 LRRC18Q8N456 261 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 GOLGA6L1Q8N7Z2 621 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 SMYD1Q8NB12 490 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 AKR7LQ8NHP1 331 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 ST7LQ8TDW4 575 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 ADAMTS16Q8TE57 1224 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 C10orf82Q8WW14 230 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 LIPHQ8WWY8 451 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 ASB10Q8WXI3 467 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 HDAC2Q92769 488 aaKnown RBP5.13□□□□□ -1.59
VRK3-220ENST00000600259 TMIGD2Q96BF3 282 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 UPRTQ96BW1 309 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 TRIM44Q96DX7 344 aaPredicted RBP5.13□□□□□ -1.59
VRK3-220ENST00000600259 SAMD8Q96LT4 415 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 DCLRE1CQ96SD1 692 aaKnown RBP5.13□□□□□ -1.59
VRK3-220ENST00000600259 ZNF607Q96SK3 696 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 SLC19A3Q9BZV2 496 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 PCDHAC1Q9H158 963 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 WNT5BQ9H1J7 359 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 LRMDAQ9H2I8 198 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 EVA1AQ9H8M9 152 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 MSL2Q9HCI7 577 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 KCNK9Q9NPC2 374 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 NANSQ9NR45 359 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 TMEM106BQ9NUM4 274 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 ZNF229Q9UJW7 825 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 ZDHHC8Q9ULC8 765 aa5.13□□□□□ -1.59
VRK3-220ENST00000600259 ISPDA4D126 451 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 C5orf49A4QMS7 147 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 CPSF4LA6NMK7 179 aaKnown RBP5.12□□□□□ -1.59
VRK3-220ENST00000600259 TMEM178BH3BS89 294 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 H3BSA7 217 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 SERPINB7O75635 380 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 SLC2A10O95528 541 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 IGHG1P01857 330 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 F13BP05160 661 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 SCG5P05408 212 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 FUT1P19526 365 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 DRD4P21917 467 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 CCNOP22674 350 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 PPIBP23284 216 aaKnown RBP5.12□□□□□ -1.59
VRK3-220ENST00000600259 OMGP23515 440 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 SLC6A2P23975 617 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 AQP1P29972 269 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 APLNRP35414 380 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 AQP2P41181 271 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 GZMMP51124 257 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 SLC18A1P54219 525 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 PPP1CBP62140 327 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 HSF2Q03933 536 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 RPL18Q07020 188 aaKnown RBP5.12□□□□□ -1.59
VRK3-220ENST00000600259 LAPTM4AQ15012 233 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 RUNDC3AQ59EK9 446 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 TTC33Q6PID6 262 aaPredicted RBP5.12□□□□□ -1.59
VRK3-220ENST00000600259 RANBP3LQ86VV4 465 aaPredicted RBP5.12□□□□□ -1.59
VRK3-220ENST00000600259 ARMC8Q8IUR7 673 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 C1orf174Q8IYL3 243 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 KIR3DL3Q8N743 410 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 POU5F2Q8N7G0 328 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 ANKRD42Q8N9B4 389 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 ICA1LQ8NDH6 482 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 HIPK4Q8NE63 616 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 NOXO1Q8NFA2 376 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 MOSPD2Q8NHP6 518 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 WFDC12Q8WWY7 111 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 SLC25A28Q96A46 364 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 ZBTB9Q96C00 473 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 SPDL1Q96EA4 605 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 MPP4Q96JB8 637 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 DIRC2Q96SL1 478 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 CITED1Q99966 193 aa5.12□□□□□ -1.59
VRK3-220ENST00000600259 PAIP2Q9BPZ3 127 aaKnown RBP5.12□□□□□ -1.59
VRK3-220ENST00000600259 CPPED1Q9BRF8 314 aaPredicted RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms