RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 FXYD1O00168 92 aa12.49□□□□□ -0.41
IRF3-223ENST00000599223 ENTPD5O75356 428 aa12.49□□□□□ -0.41
IRF3-223ENST00000599223 FARS2O95363 451 aaKnown RBP12.49□□□□□ -0.41
IRF3-223ENST00000599223 BCL10O95999 233 aa12.49□□□□□ -0.41
IRF3-223ENST00000599223 PNPP00491 289 aa12.49□□□□□ -0.41
IRF3-223ENST00000599223 HSD17B1P14061 328 aa12.49□□□□□ -0.41
IRF3-223ENST00000599223 EPHA1P21709 976 aa12.49□□□□□ -0.41
IRF3-223ENST00000599223 CDAP32320 146 aa12.49□□□□□ -0.41
IRF3-223ENST00000599223 RBMXP38159 391 aaKnown RBP12.49□□□□□ -0.41
IRF3-223ENST00000599223 WNT5AP41221 380 aa12.49□□□□□ -0.41
IRF3-223ENST00000599223 CLRN1P58418 232 aa12.49□□□□□ -0.41
IRF3-223ENST00000599223 FMODQ06828 376 aa12.49□□□□□ -0.41
IRF3-223ENST00000599223 SLC36A2Q495M3 483 aa12.49□□□□□ -0.41
IRF3-223ENST00000599223 SPATA46Q5T0L3 261 aa12.49□□□□□ -0.41
IRF3-223ENST00000599223 NANOGP8Q6NSW7 305 aa12.49□□□□□ -0.41
IRF3-223ENST00000599223 ZFP1Q6P2D0 407 aa12.49□□□□□ -0.41
IRF3-223ENST00000599223 TMEM53Q6P2H8 277 aa12.49□□□□□ -0.41
IRF3-223ENST00000599223 FAHD2BQ6P2I3 314 aaPredicted RBP12.49□□□□□ -0.41
IRF3-223ENST00000599223 C12orf54Q6X4T0 127 aa12.49□□□□□ -0.41
IRF3-223ENST00000599223 SLC16A14Q7RTX9 510 aa12.49□□□□□ -0.41
IRF3-223ENST00000599223 DHFR2Q86XF0 187 aa12.49□□□□□ -0.41
IRF3-223ENST00000599223 NKAIN4Q8IVV8 208 aa12.49□□□□□ -0.41
IRF3-223ENST00000599223 ZNF101Q8IZC7 436 aa12.49□□□□□ -0.41
IRF3-223ENST00000599223 LRRC18Q8N456 261 aa12.49□□□□□ -0.41
IRF3-223ENST00000599223 RNF148Q8N7C7 305 aa12.49□□□□□ -0.41
IRF3-223ENST00000599223 OR10A6Q8NH74 314 aa12.49□□□□□ -0.41
IRF3-223ENST00000599223 MOSPD2Q8NHP6 518 aa12.49□□□□□ -0.41
IRF3-223ENST00000599223 ZNF519Q8TB69 540 aa12.49□□□□□ -0.41
IRF3-223ENST00000599223 SLC26A7Q8TE54 656 aa12.49□□□□□ -0.41
IRF3-223ENST00000599223 TMEM255BQ8WV15 326 aa12.49□□□□□ -0.41
IRF3-223ENST00000599223 NABP1Q96AH0 204 aa12.49□□□□□ -0.41
IRF3-223ENST00000599223 NMD3Q96D46 503 aaKnown RBP12.49□□□□□ -0.41
IRF3-223ENST00000599223 FAHD2AQ96GK7 314 aa12.49□□□□□ -0.41
IRF3-223ENST00000599223 TMPRSS13Q9BYE2 586 aa12.49□□□□□ -0.41
IRF3-223ENST00000599223 SLC19A3Q9BZV2 496 aa12.49□□□□□ -0.41
IRF3-223ENST00000599223 RNF121Q9H920 327 aa12.49□□□□□ -0.41
IRF3-223ENST00000599223 NANOGQ9H9S0 305 aa12.49□□□□□ -0.41
IRF3-223ENST00000599223 MEGF8Q7Z7M0 2845 aa12.49□□□□□ -0.41
IRF3-223ENST00000599223 A0A0A6YYJ9 748 aa12.48□□□□□ -0.41
IRF3-223ENST00000599223 BLOC1S5-TXNDC5H3BN57 136 aa12.48□□□□□ -0.41
IRF3-223ENST00000599223 GSTA4O15217 222 aa12.48□□□□□ -0.41
IRF3-223ENST00000599223 TRMUO75648 421 aaKnown RBP12.48□□□□□ -0.41
IRF3-223ENST00000599223 MPZL1O95297 269 aa12.48□□□□□ -0.41
IRF3-223ENST00000599223 ADRA2CP18825 462 aa12.48□□□□□ -0.41
IRF3-223ENST00000599223 FUT1P19526 365 aa12.48□□□□□ -0.41
IRF3-223ENST00000599223 MAKP20794 623 aa12.48□□□□□ -0.41
IRF3-223ENST00000599223 MPV17P39210 176 aa12.48□□□□□ -0.41
IRF3-223ENST00000599223 AQP2P41181 271 aa12.48□□□□□ -0.41
IRF3-223ENST00000599223 ZNF133P52736 654 aaPredicted RBP12.48□□□□□ -0.41
IRF3-223ENST00000599223 UCP2P55851 309 aa12.48□□□□□ -0.41
IRF3-223ENST00000599223 LIPEQ05469 1076 aa12.48□□□□□ -0.41
IRF3-223ENST00000599223 TSTQ16762 297 aaKnown RBP12.48□□□□□ -0.41
IRF3-223ENST00000599223 TBC1D28Q2M2D7 210 aa12.48□□□□□ -0.41
IRF3-223ENST00000599223 NRN1LQ496H8 165 aa12.48□□□□□ -0.41
IRF3-223ENST00000599223 SPRNQ5BIV9 151 aa12.48□□□□□ -0.41
IRF3-223ENST00000599223 PABPC1L2AQ5JQF8 200 aa12.48□□□□□ -0.41
IRF3-223ENST00000599223 C10orf128Q5T292 105 aa12.48□□□□□ -0.41
IRF3-223ENST00000599223 ARMC4Q5T2S8 1044 aa12.48□□□□□ -0.41
IRF3-223ENST00000599223 TMEM154Q6P9G4 183 aa12.48□□□□□ -0.41
IRF3-223ENST00000599223 RFPL4BQ6ZWI9 263 aa12.48□□□□□ -0.41
IRF3-223ENST00000599223 USP51Q70EK9 711 aa12.48□□□□□ -0.41
IRF3-223ENST00000599223 PATL1Q86TB9 770 aaKnown RBP12.48□□□□□ -0.41
IRF3-223ENST00000599223 SLC15A3Q8IY34 581 aa12.48□□□□□ -0.41
IRF3-223ENST00000599223 SNX33Q8WV41 574 aa12.48□□□□□ -0.41
IRF3-223ENST00000599223 ZFAND2BQ8WV99 257 aa12.48□□□□□ -0.41
IRF3-223ENST00000599223 IPCEF1Q8WWN9 437 aaPredicted RBP12.48□□□□□ -0.41
IRF3-223ENST00000599223 MPP4Q96JB8 637 aa12.48□□□□□ -0.41
IRF3-223ENST00000599223 RNPEPL1Q9HAU8 725 aa12.48□□□□□ -0.41
IRF3-223ENST00000599223 WIPI2Q9Y4P8 454 aa12.48□□□□□ -0.41
IRF3-223ENST00000599223 IGHV1-69-2A0A0G2JMI3 117 aa12.47□□□□□ -0.41
IRF3-223ENST00000599223 SLC22A23A1A5C7 686 aa12.47□□□□□ -0.41
IRF3-223ENST00000599223 ZSCAN5BA6NJL1 495 aa12.47□□□□□ -0.41
IRF3-223ENST00000599223 MCIDASD6RGH6 385 aa12.47□□□□□ -0.41
IRF3-223ENST00000599223 NME4O00746 187 aa12.47□□□□□ -0.41
IRF3-223ENST00000599223 PLPP2O43688 288 aa12.47□□□□□ -0.41
IRF3-223ENST00000599223 PIP5K1CO60331 668 aa12.47□□□□□ -0.41
IRF3-223ENST00000599223 OR7A10O76100 309 aa12.47□□□□□ -0.41
IRF3-223ENST00000599223 IGHV2-5P01817 119 aa12.47□□□□□ -0.41
IRF3-223ENST00000599223 ACADSP16219 412 aa12.47□□□□□ -0.41
IRF3-223ENST00000599223 ZNF32P17041 273 aa12.47□□□□□ -0.41
IRF3-223ENST00000599223 FUT4P22083 530 aa12.47□□□□□ -0.41
IRF3-223ENST00000599223 CRYBB2P43320 205 aa12.47□□□□□ -0.41
IRF3-223ENST00000599223 HILS1P60008 231 aa12.47□□□□□ -0.41
IRF3-223ENST00000599223 ACTG1P63261 375 aa12.47□□□□□ -0.41
IRF3-223ENST00000599223 VMACQ2NL98 169 aa12.47□□□□□ -0.41
IRF3-223ENST00000599223 PCGF3Q3KNV8 242 aa12.47□□□□□ -0.41
IRF3-223ENST00000599223 RABL3Q5HYI8 236 aa12.47□□□□□ -0.41
IRF3-223ENST00000599223 DPPA2Q7Z7J5 298 aa12.47□□□□□ -0.41
IRF3-223ENST00000599223 SPATA24Q86W54 205 aa12.47□□□□□ -0.41
IRF3-223ENST00000599223 CLDN22Q8N7P3 220 aa12.47□□□□□ -0.41
IRF3-223ENST00000599223 OR1J1Q8NGS3 322 aa12.47□□□□□ -0.41
IRF3-223ENST00000599223 HDAC2Q92769 488 aaKnown RBP12.47□□□□□ -0.41
IRF3-223ENST00000599223 POP5Q969H6 163 aaKnown RBP12.47□□□□□ -0.41
IRF3-223ENST00000599223 C1orf198Q9H425 327 aa12.47□□□□□ -0.41
IRF3-223ENST00000599223 CMTM6Q9NX76 183 aa12.47□□□□□ -0.41
IRF3-223ENST00000599223 SLCO1C1Q9NYB5 712 aa12.47□□□□□ -0.41
IRF3-223ENST00000599223 NKIRAS2Q9NYR9 191 aa12.47□□□□□ -0.41
IRF3-223ENST00000599223 CD300AQ9UGN4 299 aa12.47□□□□□ -0.41
IRF3-223ENST00000599223 MAGEL2Q9UJ55 1249 aa12.47□□□□□ -0.41
IRF3-223ENST00000599223 LOC100509620A0A075B734 347 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms