RNA–Protein interactions for RNA: ENST00000598558.5

SHKBP1-217, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-217ENST00000598558 OR52L1Q8NGH7 329 aa12.31□□□□□ -0.44
SHKBP1-217ENST00000598558 C11orf40Q8WZ69 217 aa12.31□□□□□ -0.44
SHKBP1-217ENST00000598558 SNX18Q96RF0 628 aa12.31□□□□□ -0.44
SHKBP1-217ENST00000598558 HCAR1Q9BXC0 346 aa12.31□□□□□ -0.44
SHKBP1-217ENST00000598558 WNT5BQ9H1J7 359 aa12.31□□□□□ -0.44
SHKBP1-217ENST00000598558 RPRD1BQ9NQG5 326 aaKnown RBP12.31□□□□□ -0.44
SHKBP1-217ENST00000598558 TMEFF2Q9UIK5 374 aaPredicted RBP12.31□□□□□ -0.44
SHKBP1-217ENST00000598558 ITGB1BP2Q9UKP3 347 aa12.31□□□□□ -0.44
SHKBP1-217ENST00000598558 ATP23Q9Y6H3 246 aa12.31□□□□□ -0.44
SHKBP1-217ENST00000598558 SAC3D1A6NKF1 404 aa12.3□□□□□ -0.44
SHKBP1-217ENST00000598558 G3V2T6 193 aa12.3□□□□□ -0.44
SHKBP1-217ENST00000598558 H3BN98 237 aa12.3□□□□□ -0.44
SHKBP1-217ENST00000598558 FARS2O95363 451 aaKnown RBP12.3□□□□□ -0.44
SHKBP1-217ENST00000598558 SERPINA5P05154 406 aa12.3□□□□□ -0.44
SHKBP1-217ENST00000598558 CST2P09228 141 aa12.3□□□□□ -0.44
SHKBP1-217ENST00000598558 GAAP10253 952 aa12.3□□□□□ -0.44
SHKBP1-217ENST00000598558 CLUP10909 449 aa12.3□□□□□ -0.44
SHKBP1-217ENST00000598558 NR2C1P13056 603 aa12.3□□□□□ -0.44
SHKBP1-217ENST00000598558 NPR2P20594 1047 aa12.3□□□□□ -0.44
SHKBP1-217ENST00000598558 MSR1P21757 451 aa12.3□□□□□ -0.44
SHKBP1-217ENST00000598558 EPHA2P29317 976 aa12.3□□□□□ -0.44
SHKBP1-217ENST00000598558 NOS3P29474 1203 aa12.3□□□□□ -0.44
SHKBP1-217ENST00000598558 PYCR1P32322 319 aa12.3□□□□□ -0.44
SHKBP1-217ENST00000598558 CDK5Q00535 292 aa12.3□□□□□ -0.44
SHKBP1-217ENST00000598558 CRMP1Q14194 572 aa12.3□□□□□ -0.44
SHKBP1-217ENST00000598558 MST1LQ2TV78 715 aa12.3□□□□□ -0.44
SHKBP1-217ENST00000598558 PABPC1L2AQ5JQF8 200 aa12.3□□□□□ -0.44
SHKBP1-217ENST00000598558 LYPD4Q6UWN0 246 aa12.3□□□□□ -0.44
SHKBP1-217ENST00000598558 ZBTB46Q86UZ6 589 aa12.3□□□□□ -0.44
SHKBP1-217ENST00000598558 JAZF1Q86VZ6 243 aa12.3□□□□□ -0.44
SHKBP1-217ENST00000598558 HIPK1Q86Z02 1210 aa12.3□□□□□ -0.44
SHKBP1-217ENST00000598558 GLB1L2Q8IW92 636 aa12.3□□□□□ -0.44
SHKBP1-217ENST00000598558 OR2T33Q8NG76 320 aa12.3□□□□□ -0.44
SHKBP1-217ENST00000598558 AKR7LQ8NHP1 331 aa12.3□□□□□ -0.44
SHKBP1-217ENST00000598558 SMAP2Q8WU79 429 aaPredicted RBP12.3□□□□□ -0.44
SHKBP1-217ENST00000598558 CENPNQ96H22 339 aaPredicted RBP12.3□□□□□ -0.44
SHKBP1-217ENST00000598558 BDH2Q9BUT1 245 aa12.3□□□□□ -0.44
SHKBP1-217ENST00000598558 RBM4Q9BWF3 364 aaKnown RBP12.3□□□□□ -0.44
SHKBP1-217ENST00000598558 NMNAT2Q9BZQ4 307 aa12.3□□□□□ -0.44
SHKBP1-217ENST00000598558 RNF121Q9H920 327 aa12.3□□□□□ -0.44
SHKBP1-217ENST00000598558 MED20Q9H944 212 aa12.3□□□□□ -0.44
SHKBP1-217ENST00000598558 S100A14Q9HCY8 104 aa12.3□□□□□ -0.44
SHKBP1-217ENST00000598558 OAZ3Q9UMX2 235 aa12.3□□□□□ -0.44
SHKBP1-217ENST00000598558 CADP27708 2225 aa12.3□□□□□ -0.44
SHKBP1-217ENST00000598558 LOC100509620A0A075B734 347 aa12.29□□□□□ -0.44
SHKBP1-217ENST00000598558 RAB36O95755 333 aa12.29□□□□□ -0.44
SHKBP1-217ENST00000598558 RENP00797 406 aa12.29□□□□□ -0.44
SHKBP1-217ENST00000598558 PSKH1P11801 424 aa12.29□□□□□ -0.44
SHKBP1-217ENST00000598558 ZNF23P17027 643 aa12.29□□□□□ -0.44
SHKBP1-217ENST00000598558 PAX7P23759 505 aa12.29□□□□□ -0.44
SHKBP1-217ENST00000598558 DNASE1P24855 282 aa12.29□□□□□ -0.44
SHKBP1-217ENST00000598558 APEX1P27695 318 aaKnown RBP12.29□□□□□ -0.44
SHKBP1-217ENST00000598558 POLR2IP36954 125 aaKnown RBP12.29□□□□□ -0.44
SHKBP1-217ENST00000598558 KEAP1Q14145 624 aa12.29□□□□□ -0.44
SHKBP1-217ENST00000598558 TESK1Q15569 626 aa12.29□□□□□ -0.44
SHKBP1-217ENST00000598558 KCNMB1Q16558 191 aa12.29□□□□□ -0.44
SHKBP1-217ENST00000598558 ZSCAN26Q16670 478 aa12.29□□□□□ -0.44
SHKBP1-217ENST00000598558 SLC36A2Q495M3 483 aa12.29□□□□□ -0.44
SHKBP1-217ENST00000598558 KDM4DQ6B0I6 523 aa12.29□□□□□ -0.44
SHKBP1-217ENST00000598558 OR51L1Q8NGJ5 315 aa12.29□□□□□ -0.44
SHKBP1-217ENST00000598558 OR9Q1Q8NGQ5 310 aa12.29□□□□□ -0.44
SHKBP1-217ENST00000598558 NANOS1Q8WY41 292 aaKnown RBP12.29□□□□□ -0.44
SHKBP1-217ENST00000598558 PTP4A1Q93096 173 aa12.29□□□□□ -0.44
SHKBP1-217ENST00000598558 FBXW5Q969U6 566 aa12.29□□□□□ -0.44
SHKBP1-217ENST00000598558 RAB3IPQ96QF0 476 aaPredicted RBP12.29□□□□□ -0.44
SHKBP1-217ENST00000598558 OR2H1Q9GZK4 316 aa12.29□□□□□ -0.44
SHKBP1-217ENST00000598558 GABARAPL1Q9H0R8 117 aa12.29□□□□□ -0.44
SHKBP1-217ENST00000598558 MRPL22Q9NWU5 206 aaKnown RBP12.29□□□□□ -0.44
SHKBP1-217ENST00000598558 LAMP3Q9UQV4 416 aa12.29□□□□□ -0.44
SHKBP1-217ENST00000598558 FKBP7Q9Y680 259 aa12.29□□□□□ -0.44
SHKBP1-217ENST00000598558 ROS1P08922 2347 aa12.29□□□□□ -0.44
SHKBP1-217ENST00000598558 AKAP6Q13023 2319 aa12.29□□□□□ -0.44
SHKBP1-217ENST00000598558 MAST4O15021 2626 aa12.29□□□□□ -0.44
SHKBP1-217ENST00000598558 RAI1Q7Z5J4 1906 aaPredicted RBP12.29□□□□□ -0.44
SHKBP1-217ENST00000598558 FAM183AA6NL82 134 aa12.28□□□□□ -0.44
SHKBP1-217ENST00000598558 CRYAAP02489 173 aa12.28□□□□□ -0.44
SHKBP1-217ENST00000598558 GYPBP06028 91 aa12.28□□□□□ -0.44
SHKBP1-217ENST00000598558 FCGR1AP12314 374 aa12.28□□□□□ -0.44
SHKBP1-217ENST00000598558 GRK5P34947 590 aa12.28□□□□□ -0.44
SHKBP1-217ENST00000598558 THBS4P35443 961 aa12.28□□□□□ -0.44
SHKBP1-217ENST00000598558 CENPAP49450 140 aa12.28□□□□□ -0.44
SHKBP1-217ENST00000598558 ARHGDIAP52565 204 aa12.28□□□□□ -0.44
SHKBP1-217ENST00000598558 CRISP1P54107 249 aa12.28□□□□□ -0.44
SHKBP1-217ENST00000598558 NKX6-1P78426 367 aaPredicted RBP12.28□□□□□ -0.44
SHKBP1-217ENST00000598558 DEFB113Q30KQ7 82 aa12.28□□□□□ -0.44
SHKBP1-217ENST00000598558 ZNF774Q6NX45 483 aa12.28□□□□□ -0.44
SHKBP1-217ENST00000598558 TMEM53Q6P2H8 277 aa12.28□□□□□ -0.44
SHKBP1-217ENST00000598558 C20orf204Q6ZNR8 217 aa12.28□□□□□ -0.44
SHKBP1-217ENST00000598558 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.28□□□□□ -0.44
SHKBP1-217ENST00000598558 ZDHHC13Q8IUH4 622 aa12.28□□□□□ -0.44
SHKBP1-217ENST00000598558 ICA1LQ8NDH6 482 aa12.28□□□□□ -0.44
SHKBP1-217ENST00000598558 SLC26A10Q8NG04 563 aa12.28□□□□□ -0.44
SHKBP1-217ENST00000598558 TEX47Q8TBZ9 253 aa12.28□□□□□ -0.44
SHKBP1-217ENST00000598558 NINJ1Q92982 152 aa12.28□□□□□ -0.44
SHKBP1-217ENST00000598558 MBD6Q96DN6 1003 aa12.28□□□□□ -0.44
SHKBP1-217ENST00000598558 DHRS9Q9BPW9 319 aa12.28□□□□□ -0.44
SHKBP1-217ENST00000598558 TRAF4Q9BUZ4 470 aaPredicted RBP12.28□□□□□ -0.44
SHKBP1-217ENST00000598558 RACGAP1Q9H0H5 632 aa12.28□□□□□ -0.44
SHKBP1-217ENST00000598558 ZNF556Q9HAH1 456 aa12.28□□□□□ -0.44
SHKBP1-217ENST00000598558 PAPOLBQ9NRJ5 636 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms