RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 SLC18B1Q6NT16 456 aa13.63□□□□□ -0.23
UPF1-206ENST00000598471 ZNF367Q7RTV3 350 aa13.63□□□□□ -0.23
UPF1-206ENST00000598471 DPY19L4Q7Z388 723 aa13.63□□□□□ -0.23
UPF1-206ENST00000598471 LHFPL3Q86UP9 236 aa13.63□□□□□ -0.23
UPF1-206ENST00000598471 CDC20BQ86Y33 519 aa13.63□□□□□ -0.23
UPF1-206ENST00000598471 OR52N1Q8NH53 320 aa13.63□□□□□ -0.23
UPF1-206ENST00000598471 OTOSQ8NHW6 89 aa13.63□□□□□ -0.23
UPF1-206ENST00000598471 ASB17Q8WXJ9 295 aa13.63□□□□□ -0.23
UPF1-206ENST00000598471 TTYH2Q9BSA4 534 aa13.63□□□□□ -0.23
UPF1-206ENST00000598471 ALG8Q9BVK2 526 aa13.63□□□□□ -0.23
UPF1-206ENST00000598471 TAS2R16Q9NYV7 291 aa13.63□□□□□ -0.23
UPF1-206ENST00000598471 CAB39Q9Y376 341 aaPredicted RBP13.63□□□□□ -0.23
UPF1-206ENST00000598471 UGT2A1Q9Y4X1 527 aa13.63□□□□□ -0.23
UPF1-206ENST00000598471 BSNQ9UPA5 3926 aa13.63□□□□□ -0.23
UPF1-206ENST00000598471 ZFYVE26Q68DK2 2539 aa13.62□□□□□ -0.23
UPF1-206ENST00000598471 A0A1W2PQL4 384 aaPredicted RBP13.62□□□□□ -0.23
UPF1-206ENST00000598471 FARS2O95363 451 aaKnown RBP13.62□□□□□ -0.23
UPF1-206ENST00000598471 CNOT4O95628 575 aaKnown RBP13.62□□□□□ -0.23
UPF1-206ENST00000598471 LIMS3P0CW19 117 aa13.62□□□□□ -0.23
UPF1-206ENST00000598471 LIMS4P0CW20 117 aa13.62□□□□□ -0.23
UPF1-206ENST00000598471 GLI4P10075 376 aa13.62□□□□□ -0.23
UPF1-206ENST00000598471 JUNBP17275 347 aaPredicted RBP13.62□□□□□ -0.23
UPF1-206ENST00000598471 PCMT1P22061 227 aa13.62□□□□□ -0.23
UPF1-206ENST00000598471 CDAP32320 146 aa13.62□□□□□ -0.23
UPF1-206ENST00000598471 KIR2DL2P43627 348 aaPredicted RBP13.62□□□□□ -0.23
UPF1-206ENST00000598471 SH3BGRP55822 239 aaPredicted RBP13.62□□□□□ -0.23
UPF1-206ENST00000598471 WNT4P56705 351 aa13.62□□□□□ -0.23
UPF1-206ENST00000598471 LSM6P62312 80 aaKnown RBP13.62□□□□□ -0.23
UPF1-206ENST00000598471 MEP1BQ16820 701 aa13.62□□□□□ -0.23
UPF1-206ENST00000598471 NRN1LQ496H8 165 aa13.62□□□□□ -0.23
UPF1-206ENST00000598471 UBE2UQ5VVX9 321 aa13.62□□□□□ -0.23
UPF1-206ENST00000598471 TMEM211Q6ICI0 200 aa13.62□□□□□ -0.23
UPF1-206ENST00000598471 TFAP2EQ6VUC0 442 aa13.62□□□□□ -0.23
UPF1-206ENST00000598471 SEM1Q6ZVN7 128 aa13.62□□□□□ -0.23
UPF1-206ENST00000598471 NANOGP1Q8N7R0 232 aa13.62□□□□□ -0.23
UPF1-206ENST00000598471 OR2AJ1Q8NGZ0 328 aa13.62□□□□□ -0.23
UPF1-206ENST00000598471 SNX33Q8WV41 574 aa13.62□□□□□ -0.23
UPF1-206ENST00000598471 FOXB1Q99853 325 aa13.62□□□□□ -0.23
UPF1-206ENST00000598471 SFXN3Q9BWM7 321 aa13.62□□□□□ -0.23
UPF1-206ENST00000598471 SIAEQ9HAT2 523 aa13.62□□□□□ -0.23
UPF1-206ENST00000598471 TMEM38BQ9NVV0 291 aa13.62□□□□□ -0.23
UPF1-206ENST00000598471 MALT1Q9UDY8 824 aa13.62□□□□□ -0.23
UPF1-206ENST00000598471 CLEC2DQ9UHP7 191 aa13.62□□□□□ -0.23
UPF1-206ENST00000598471 TINAGQ9UJW2 476 aa13.62□□□□□ -0.23
UPF1-206ENST00000598471 PROCRQ9UNN8 238 aa13.62□□□□□ -0.23
UPF1-206ENST00000598471 ATRXP46100 2492 aa13.61□□□□□ -0.23
UPF1-206ENST00000598471 HSPB2A8KAH6 182 aa13.61□□□□□ -0.23
UPF1-206ENST00000598471 ZNF99A8MXY4 864 aaPredicted RBP13.61□□□□□ -0.23
UPF1-206ENST00000598471 B8ZZF3 427 aa13.61□□□□□ -0.23
UPF1-206ENST00000598471 MPZL1O95297 269 aa13.61□□□□□ -0.23
UPF1-206ENST00000598471 PTHP01270 115 aa13.61□□□□□ -0.23
UPF1-206ENST00000598471 MT-ND5P03915 603 aa13.61□□□□□ -0.23
UPF1-206ENST00000598471 TFAP2AP05549 437 aa13.61□□□□□ -0.23
UPF1-206ENST00000598471 CTSSP25774 331 aa13.61□□□□□ -0.23
UPF1-206ENST00000598471 PSMB9P28065 219 aa13.61□□□□□ -0.23
UPF1-206ENST00000598471 MPGP29372 298 aa13.61□□□□□ -0.23
UPF1-206ENST00000598471 CEACAM8P31997 349 aaPredicted RBP13.61□□□□□ -0.23
UPF1-206ENST00000598471 ZNF85Q03923 595 aa13.61□□□□□ -0.23
UPF1-206ENST00000598471 FAPQ12884 760 aa13.61□□□□□ -0.23
UPF1-206ENST00000598471 EIF2B1Q14232 305 aaKnown RBP13.61□□□□□ -0.23
UPF1-206ENST00000598471 SPHARQ15513 63 aa13.61□□□□□ -0.23
UPF1-206ENST00000598471 MED22Q15528 200 aa13.61□□□□□ -0.23
UPF1-206ENST00000598471 HSPB2Q16082 182 aa13.61□□□□□ -0.23
UPF1-206ENST00000598471 PCK2Q16822 640 aa13.61□□□□□ -0.23
UPF1-206ENST00000598471 XAF1Q6GPH4 301 aa13.61□□□□□ -0.23
UPF1-206ENST00000598471 KCTD18Q6PI47 426 aaPredicted RBP13.61□□□□□ -0.23
UPF1-206ENST00000598471 ZNF322Q6U7Q0 402 aaPredicted RBP13.61□□□□□ -0.23
UPF1-206ENST00000598471 C3P1Q6ZMU1 363 aa13.61□□□□□ -0.23
UPF1-206ENST00000598471 PLEKHG7Q6ZR37 379 aa13.61□□□□□ -0.23
UPF1-206ENST00000598471 LINGO2Q7L985 606 aa13.61□□□□□ -0.23
UPF1-206ENST00000598471 FAM220AQ7Z4H9 259 aa13.61□□□□□ -0.23
UPF1-206ENST00000598471 ATCAYQ86WG3 371 aa13.61□□□□□ -0.23
UPF1-206ENST00000598471 EGFL6Q8IUX8 553 aa13.61□□□□□ -0.23
UPF1-206ENST00000598471 THEM6Q8WUY1 208 aa13.61□□□□□ -0.23
UPF1-206ENST00000598471 MUL1Q969V5 352 aa13.61□□□□□ -0.23
UPF1-206ENST00000598471 KCNN2Q9H2S1 579 aa13.61□□□□□ -0.23
UPF1-206ENST00000598471 EMC7Q9NPA0 242 aa13.61□□□□□ -0.23
UPF1-206ENST00000598471 PRSS50Q9UI38 385 aa13.61□□□□□ -0.23
UPF1-206ENST00000598471 SH3BGRL2Q9UJC5 107 aa13.61□□□□□ -0.23
UPF1-206ENST00000598471 SPTA1P02549 2419 aa13.61□□□□□ -0.23
UPF1-206ENST00000598471 TRGV8A0A0C4DH27 118 aa13.6□□□□□ -0.23
UPF1-206ENST00000598471 E9PLN8 166 aa13.6□□□□□ -0.23
UPF1-206ENST00000598471 KRT8P05787 483 aa13.6□□□□□ -0.23
UPF1-206ENST00000598471 ADRA2AP08913 450 aa13.6□□□□□ -0.23
UPF1-206ENST00000598471 OR8G3PP0DMU2 310 aa13.6□□□□□ -0.23
UPF1-206ENST00000598471 ALOX5APP20292 161 aa13.6□□□□□ -0.23
UPF1-206ENST00000598471 EDNRAP25101 427 aa13.6□□□□□ -0.23
UPF1-206ENST00000598471 TTKP33981 857 aa13.6□□□□□ -0.23
UPF1-206ENST00000598471 ALDH3B2P48448 385 aa13.6□□□□□ -0.23
UPF1-206ENST00000598471 HCCSP53701 268 aa13.6□□□□□ -0.23
UPF1-206ENST00000598471 PCBD1P61457 104 aa13.6□□□□□ -0.23
UPF1-206ENST00000598471 TGFBR3Q03167 851 aa13.6□□□□□ -0.23
UPF1-206ENST00000598471 EGR3Q06889 387 aa13.6□□□□□ -0.23
UPF1-206ENST00000598471 AQP6Q13520 282 aa13.6□□□□□ -0.23
UPF1-206ENST00000598471 FAM27BQ5VT28 67 aa13.6□□□□□ -0.23
UPF1-206ENST00000598471 ZNF813Q6ZN06 617 aa13.6□□□□□ -0.23
UPF1-206ENST00000598471 GPR141Q7Z602 305 aa13.6□□□□□ -0.23
UPF1-206ENST00000598471 SYS1Q8N2H4 156 aa13.6□□□□□ -0.23
UPF1-206ENST00000598471 HAVCR2Q8TDQ0 301 aa13.6□□□□□ -0.23
UPF1-206ENST00000598471 SMAP2Q8WU79 429 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms