RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 GPR139Q6DWJ6 353 aa9.03□□□□□ -0.96
CCDC9-203ENST00000596938 RGS7BPQ6MZT1 257 aaPredicted RBP9.03□□□□□ -0.96
CCDC9-203ENST00000596938 C16orf89Q6UX73 402 aa9.03□□□□□ -0.96
CCDC9-203ENST00000596938 UNQ6126/PRO20091Q6UXV3 157 aa9.03□□□□□ -0.96
CCDC9-203ENST00000596938 FAM122BQ7Z309 247 aa9.03□□□□□ -0.96
CCDC9-203ENST00000596938 C1orf174Q8IYL3 243 aa9.03□□□□□ -0.96
CCDC9-203ENST00000596938 ALDH16A1Q8IZ83 802 aa9.03□□□□□ -0.96
CCDC9-203ENST00000596938 FAM86B1Q8N7N1 296 aa9.03□□□□□ -0.96
CCDC9-203ENST00000596938 CLDN22Q8N7P3 220 aa9.03□□□□□ -0.96
CCDC9-203ENST00000596938 POM121L2Q96KW2 1035 aa9.03□□□□□ -0.96
CCDC9-203ENST00000596938 GPX7Q96SL4 187 aaPredicted RBP9.03□□□□□ -0.96
CCDC9-203ENST00000596938 SYT3Q9BQG1 590 aa9.03□□□□□ -0.96
CCDC9-203ENST00000596938 HEATR1Q9H583 2144 aaKnown RBP9.03□□□□□ -0.96
CCDC9-203ENST00000596938 KRCC1Q9NPI7 259 aaPredicted RBP9.03□□□□□ -0.96
CCDC9-203ENST00000596938 NRIP3Q9NQ35 241 aa9.03□□□□□ -0.96
CCDC9-203ENST00000596938 GPR160Q9UJ42 338 aa9.03□□□□□ -0.96
CCDC9-203ENST00000596938 SIGLEC7Q9Y286 467 aa9.03□□□□□ -0.96
CCDC9-203ENST00000596938 IGLV3-9A0A075B6K5 115 aa9.02□□□□□ -0.97
CCDC9-203ENST00000596938 LOC100509620A0A075B734 347 aa9.02□□□□□ -0.97
CCDC9-203ENST00000596938 IGHV4-61A0A0C4DH41 118 aa9.02□□□□□ -0.97
CCDC9-203ENST00000596938 TRBV4-1A0A0J9YWV2 114 aa9.02□□□□□ -0.97
CCDC9-203ENST00000596938 PRSS37A4D1T9 235 aa9.02□□□□□ -0.97
CCDC9-203ENST00000596938 C12orf71A8MTZ7 269 aa9.02□□□□□ -0.97
CCDC9-203ENST00000596938 XKRYO14609 159 aa9.02□□□□□ -0.97
CCDC9-203ENST00000596938 ICMTO60725 284 aa9.02□□□□□ -0.97
CCDC9-203ENST00000596938 TACSTD2P09758 323 aa9.02□□□□□ -0.97
CCDC9-203ENST00000596938 FAM157BP0CG42 384 aa9.02□□□□□ -0.97
CCDC9-203ENST00000596938 ZNF23P17027 643 aa9.02□□□□□ -0.97
CCDC9-203ENST00000596938 LAP3P28838 519 aa9.02□□□□□ -0.97
CCDC9-203ENST00000596938 MSX2P35548 267 aaPredicted RBP9.02□□□□□ -0.97
CCDC9-203ENST00000596938 KLF3P57682 345 aaPredicted RBP9.02□□□□□ -0.97
CCDC9-203ENST00000596938 MRPS11P82912 194 aaKnown RBP9.02□□□□□ -0.97
CCDC9-203ENST00000596938 RIN1Q13671 783 aa9.02□□□□□ -0.97
CCDC9-203ENST00000596938 GGTLC2Q14390 218 aa9.02□□□□□ -0.97
CCDC9-203ENST00000596938 SEC23BQ15437 767 aa9.02□□□□□ -0.97
CCDC9-203ENST00000596938 FGD3Q5JSP0 725 aa9.02□□□□□ -0.97
CCDC9-203ENST00000596938 DPY19L2P2Q6ZN68 376 aa9.02□□□□□ -0.97
CCDC9-203ENST00000596938 SYNPRQ8TBG9 265 aa9.02□□□□□ -0.97
CCDC9-203ENST00000596938 FAM46AQ96IP4 442 aaKnown RBP9.02□□□□□ -0.97
CCDC9-203ENST00000596938 Q96M85 177 aa9.02□□□□□ -0.97
CCDC9-203ENST00000596938 CCT8L2Q96SF2 557 aa9.02□□□□□ -0.97
CCDC9-203ENST00000596938 OR2H1Q9GZK4 316 aa9.02□□□□□ -0.97
CCDC9-203ENST00000596938 BPESC1Q9GZL8 116 aa9.02□□□□□ -0.97
CCDC9-203ENST00000596938 IL1RAPQ9NPH3 570 aa9.02□□□□□ -0.97
CCDC9-203ENST00000596938 SLCO1C1Q9NYB5 712 aa9.02□□□□□ -0.97
CCDC9-203ENST00000596938 TAAR3PQ9P1P4 343 aa9.02□□□□□ -0.97
CCDC9-203ENST00000596938 MYEF2Q9P2K5 600 aaKnown RBP9.02□□□□□ -0.97
CCDC9-203ENST00000596938 EIF3KQ9UBQ5 218 aaKnown RBP9.02□□□□□ -0.97
CCDC9-203ENST00000596938 FZR1Q9UM11 496 aa9.02□□□□□ -0.97
CCDC9-203ENST00000596938 ADAM18Q9Y3Q7 739 aa9.02□□□□□ -0.97
CCDC9-203ENST00000596938 FBN1P35555 2871 aaKnown RBP9.01□□□□□ -0.97
CCDC9-203ENST00000596938 ARPC2O15144 300 aa9.01□□□□□ -0.97
CCDC9-203ENST00000596938 DIRAS1O95057 198 aa9.01□□□□□ -0.97
CCDC9-203ENST00000596938 GADD45GO95257 159 aa9.01□□□□□ -0.97
CCDC9-203ENST00000596938 TXNDC12O95881 172 aa9.01□□□□□ -0.97
CCDC9-203ENST00000596938 CLPTM1O96005 669 aa9.01□□□□□ -0.97
CCDC9-203ENST00000596938 IGHV3-13P01766 116 aa9.01□□□□□ -0.97
CCDC9-203ENST00000596938 SCG5P05408 212 aa9.01□□□□□ -0.97
CCDC9-203ENST00000596938 LCKP06239 509 aa9.01□□□□□ -0.97
CCDC9-203ENST00000596938 APEHP13798 732 aaKnown RBP9.01□□□□□ -0.97
CCDC9-203ENST00000596938 MSR1P21757 451 aa9.01□□□□□ -0.97
CCDC9-203ENST00000596938 SDHAP31040 664 aa9.01□□□□□ -0.97
CCDC9-203ENST00000596938 ALDH3B1P43353 468 aa9.01□□□□□ -0.97
CCDC9-203ENST00000596938 GDI2P50395 445 aaKnown RBP9.01□□□□□ -0.97
CCDC9-203ENST00000596938 HMGA2P52926 109 aa9.01□□□□□ -0.97
CCDC9-203ENST00000596938 TMEM33P57088 247 aa9.01□□□□□ -0.97
CCDC9-203ENST00000596938 ENDOGQ14249 297 aaKnown RBP9.01□□□□□ -0.97
CCDC9-203ENST00000596938 PCGF3Q3KNV8 242 aa9.01□□□□□ -0.97
CCDC9-203ENST00000596938 CHRFAM7AQ494W8 412 aa9.01□□□□□ -0.97
CCDC9-203ENST00000596938 MESTQ5EB52 335 aa9.01□□□□□ -0.97
CCDC9-203ENST00000596938 ELFN2Q5R3F8 820 aa9.01□□□□□ -0.97
CCDC9-203ENST00000596938 ZER1Q7Z7L7 766 aa9.01□□□□□ -0.97
CCDC9-203ENST00000596938 DEFB107AQ8IZN7 70 aa9.01□□□□□ -0.97
CCDC9-203ENST00000596938 FITM2Q8N6M3 262 aa9.01□□□□□ -0.97
CCDC9-203ENST00000596938 OR1J1Q8NGS3 322 aa9.01□□□□□ -0.97
CCDC9-203ENST00000596938 OR52J3Q8NH60 311 aa9.01□□□□□ -0.97
CCDC9-203ENST00000596938 AKR7LQ8NHP1 331 aa9.01□□□□□ -0.97
CCDC9-203ENST00000596938 RDH5Q92781 318 aa9.01□□□□□ -0.97
CCDC9-203ENST00000596938 HPS1Q92902 700 aa9.01□□□□□ -0.97
CCDC9-203ENST00000596938 MCUR1Q96AQ8 359 aa9.01□□□□□ -0.97
CCDC9-203ENST00000596938 MSI2Q96DH6 328 aaKnown RBP9.01□□□□□ -0.97
CCDC9-203ENST00000596938 NSMCE2Q96MF7 247 aa9.01□□□□□ -0.97
CCDC9-203ENST00000596938 ZNF570Q96NI8 536 aa9.01□□□□□ -0.97
CCDC9-203ENST00000596938 GPA33Q99795 319 aa9.01□□□□□ -0.97
CCDC9-203ENST00000596938 ZNF416Q9BWM5 594 aa9.01□□□□□ -0.97
CCDC9-203ENST00000596938 WNT5BQ9H1J7 359 aa9.01□□□□□ -0.97
CCDC9-203ENST00000596938 TPK1Q9H3S4 243 aa9.01□□□□□ -0.97
CCDC9-203ENST00000596938 HINT3Q9NQE9 182 aaKnown RBP9.01□□□□□ -0.97
CCDC9-203ENST00000596938 POLE4Q9NR33 117 aa9.01□□□□□ -0.97
CCDC9-203ENST00000596938 NKIRAS2Q9NYR9 191 aa9.01□□□□□ -0.97
CCDC9-203ENST00000596938 VSX1Q9NZR4 365 aaPredicted RBP9.01□□□□□ -0.97
CCDC9-203ENST00000596938 CDC42EP3Q9UKI2 254 aa9.01□□□□□ -0.97
CCDC9-203ENST00000596938 AURKCQ9UQB9 309 aa9.01□□□□□ -0.97
CCDC9-203ENST00000596938 SVEP1Q4LDE5 3571 aa9.01□□□□□ -0.97
CCDC9-203ENST00000596938 ARFGEF3Q5TH69 2177 aa9□□□□□ -0.97
CCDC9-203ENST00000596938 ABCA1O95477 2261 aa9□□□□□ -0.97
CCDC9-203ENST00000596938 TEX13CA0A0J9YWL9 993 aa9□□□□□ -0.97
CCDC9-203ENST00000596938 LOC100289279A0A1B0GTE1 492 aa9□□□□□ -0.97
CCDC9-203ENST00000596938 A0A1W2PPL8 197 aa9□□□□□ -0.97
CCDC9-203ENST00000596938 A0A1W2PPW3 197 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms