RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 DHRS1Q96LJ7 313 aa11.17□□□□□ -0.62
LIG1-212ENST00000596549 Q96M85 177 aa11.17□□□□□ -0.62
LIG1-212ENST00000596549 FUZQ9BT04 418 aa11.17□□□□□ -0.62
LIG1-212ENST00000596549 NSRP1Q9H0G5 558 aaKnown RBP11.17□□□□□ -0.62
LIG1-212ENST00000596549 WNT5BQ9H1J7 359 aa11.17□□□□□ -0.62
LIG1-212ENST00000596549 MS4A5Q9H3V2 200 aa11.17□□□□□ -0.62
LIG1-212ENST00000596549 CCNB1IP1Q9NPC3 277 aa11.17□□□□□ -0.62
LIG1-212ENST00000596549 DCAF13Q9NV06 445 aaKnown RBP11.17□□□□□ -0.62
LIG1-212ENST00000596549 DUSP13Q9UII6 198 aa11.17□□□□□ -0.62
LIG1-212ENST00000596549 RPS6KA6Q9UK32 745 aa11.17□□□□□ -0.62
LIG1-212ENST00000596549 CDC42EP3Q9UKI2 254 aa11.17□□□□□ -0.62
LIG1-212ENST00000596549 SIGLEC7Q9Y286 467 aa11.17□□□□□ -0.62
LIG1-212ENST00000596549 V9GYQ6 96 aa11.17□□□□□ -0.62
LIG1-212ENST00000596549 A0A1W2PPL8 197 aa11.16□□□□□ -0.62
LIG1-212ENST00000596549 A0A1W2PRQ8 180 aa11.16□□□□□ -0.62
LIG1-212ENST00000596549 SLC22A23A1A5C7 686 aa11.16□□□□□ -0.62
LIG1-212ENST00000596549 GMNCA6NCL1 334 aa11.16□□□□□ -0.62
LIG1-212ENST00000596549 IMPA2O14732 288 aa11.16□□□□□ -0.62
LIG1-212ENST00000596549 RP2O75695 350 aa11.16□□□□□ -0.62
LIG1-212ENST00000596549 PTHP01270 115 aa11.16□□□□□ -0.62
LIG1-212ENST00000596549 LCKP06239 509 aa11.16□□□□□ -0.62
LIG1-212ENST00000596549 H1F0P07305 194 aaKnown RBP11.16□□□□□ -0.62
LIG1-212ENST00000596549 FAM157CP0CG43 387 aa11.16□□□□□ -0.62
LIG1-212ENST00000596549 STOMP27105 288 aa11.16□□□□□ -0.62
LIG1-212ENST00000596549 APLNRP35414 380 aa11.16□□□□□ -0.62
LIG1-212ENST00000596549 OMPP47874 163 aa11.16□□□□□ -0.62
LIG1-212ENST00000596549 UCP2P55851 309 aa11.16□□□□□ -0.62
LIG1-212ENST00000596549 KLF3P57682 345 aaPredicted RBP11.16□□□□□ -0.62
LIG1-212ENST00000596549 HSF2Q03933 536 aa11.16□□□□□ -0.62
LIG1-212ENST00000596549 DGCR6Q14129 220 aa11.16□□□□□ -0.62
LIG1-212ENST00000596549 SEC23BQ15437 767 aa11.16□□□□□ -0.62
LIG1-212ENST00000596549 SGCAQ16586 387 aa11.16□□□□□ -0.62
LIG1-212ENST00000596549 FGD3Q5JSP0 725 aa11.16□□□□□ -0.62
LIG1-212ENST00000596549 THEM4Q5T1C6 240 aa11.16□□□□□ -0.62
LIG1-212ENST00000596549 FAM27BQ5VT28 67 aa11.16□□□□□ -0.62
LIG1-212ENST00000596549 FAM166AQ6J272 317 aa11.16□□□□□ -0.62
LIG1-212ENST00000596549 THSD4Q6ZMP0 1018 aa11.16□□□□□ -0.62
LIG1-212ENST00000596549 ZNF540Q8NDQ6 660 aa11.16□□□□□ -0.62
LIG1-212ENST00000596549 FNDC8Q8TC99 324 aa11.16□□□□□ -0.62
LIG1-212ENST00000596549 RASD2Q96D21 266 aa11.16□□□□□ -0.62
LIG1-212ENST00000596549 ZNF570Q96NI8 536 aa11.16□□□□□ -0.62
LIG1-212ENST00000596549 SNX18Q96RF0 628 aa11.16□□□□□ -0.62
LIG1-212ENST00000596549 GPX7Q96SL4 187 aaPredicted RBP11.16□□□□□ -0.62
LIG1-212ENST00000596549 OR2H1Q9GZK4 316 aa11.16□□□□□ -0.62
LIG1-212ENST00000596549 POLE4Q9NR33 117 aa11.16□□□□□ -0.62
LIG1-212ENST00000596549 ADA2Q9NZK5 511 aa11.16□□□□□ -0.62
LIG1-212ENST00000596549 TAAR3PQ9P1P4 343 aa11.16□□□□□ -0.62
LIG1-212ENST00000596549 KCNS2Q9ULS6 477 aa11.16□□□□□ -0.62
LIG1-212ENST00000596549 SAMD4AQ9UPU9 718 aaKnown RBP11.16□□□□□ -0.62
LIG1-212ENST00000596549 TEX13CA0A0J9YWL9 993 aa11.15□□□□□ -0.62
LIG1-212ENST00000596549 LOC100289279A0A1B0GTE1 492 aa11.15□□□□□ -0.62
LIG1-212ENST00000596549 A6NIZ1 184 aa11.15□□□□□ -0.62
LIG1-212ENST00000596549 C17orf100A8MU93 164 aa11.15□□□□□ -0.62
LIG1-212ENST00000596549 CD14P08571 375 aa11.15□□□□□ -0.62
LIG1-212ENST00000596549 CST2P09228 141 aa11.15□□□□□ -0.62
LIG1-212ENST00000596549 CCNOP22674 350 aa11.15□□□□□ -0.62
LIG1-212ENST00000596549 COL8A2P25067 703 aa11.15□□□□□ -0.62
LIG1-212ENST00000596549 CHN2P52757 468 aa11.15□□□□□ -0.62
LIG1-212ENST00000596549 RAP1BP61224 184 aa11.15□□□□□ -0.62
LIG1-212ENST00000596549 RAP1AP62834 184 aa11.15□□□□□ -0.62
LIG1-212ENST00000596549 GNGT1P63211 74 aa11.15□□□□□ -0.62
LIG1-212ENST00000596549 GLO1Q04760 184 aa11.15□□□□□ -0.62
LIG1-212ENST00000596549 PLP2Q04941 152 aa11.15□□□□□ -0.62
LIG1-212ENST00000596549 KRR1Q13601 381 aaKnown RBP11.15□□□□□ -0.62
LIG1-212ENST00000596549 NKPD1Q17RQ9 610 aa11.15□□□□□ -0.62
LIG1-212ENST00000596549 ZBED5Q49AG3 693 aa11.15□□□□□ -0.62
LIG1-212ENST00000596549 OTPQ5XKR4 325 aa11.15□□□□□ -0.62
LIG1-212ENST00000596549 UGT2A3Q6UWM9 527 aa11.15□□□□□ -0.62
LIG1-212ENST00000596549 CYP4Z1Q86W10 505 aa11.15□□□□□ -0.62
LIG1-212ENST00000596549 PGAM4Q8N0Y7 254 aa11.15□□□□□ -0.62
LIG1-212ENST00000596549 ICA1LQ8NDH6 482 aa11.15□□□□□ -0.62
LIG1-212ENST00000596549 OR1J2Q8NGS2 313 aa11.15□□□□□ -0.62
LIG1-212ENST00000596549 OR1J1Q8NGS3 322 aa11.15□□□□□ -0.62
LIG1-212ENST00000596549 SYNPRQ8TBG9 265 aa11.15□□□□□ -0.62
LIG1-212ENST00000596549 IPCEF1Q8WWN9 437 aaPredicted RBP11.15□□□□□ -0.62
LIG1-212ENST00000596549 RSRC1Q96IZ7 334 aaKnown RBP11.15□□□□□ -0.62
LIG1-212ENST00000596549 GPA33Q99795 319 aa11.15□□□□□ -0.62
LIG1-212ENST00000596549 ZNF416Q9BWM5 594 aa11.15□□□□□ -0.62
LIG1-212ENST00000596549 BCL2L14Q9BZR8 327 aa11.15□□□□□ -0.62
LIG1-212ENST00000596549 ZNF275Q9NSD4 429 aaPredicted RBP11.15□□□□□ -0.62
LIG1-212ENST00000596549 ARL8BQ9NVJ2 186 aa11.15□□□□□ -0.62
LIG1-212ENST00000596549 TMEM5Q9Y2B1 443 aa11.15□□□□□ -0.62
LIG1-212ENST00000596549 C5orf49A4QMS7 147 aa11.14□□□□□ -0.63
LIG1-212ENST00000596549 WNT9BO14905 357 aa11.14□□□□□ -0.63
LIG1-212ENST00000596549 ARPC2O15144 300 aa11.14□□□□□ -0.63
LIG1-212ENST00000596549 ICMTO60725 284 aa11.14□□□□□ -0.63
LIG1-212ENST00000596549 NDUFB2O95178 105 aa11.14□□□□□ -0.63
LIG1-212ENST00000596549 HSD17B1P14061 328 aa11.14□□□□□ -0.63
LIG1-212ENST00000596549 CTLA4P16410 223 aa11.14□□□□□ -0.63
LIG1-212ENST00000596549 RHCEP18577 417 aa11.14□□□□□ -0.63
LIG1-212ENST00000596549 MSR1P21757 451 aa11.14□□□□□ -0.63
LIG1-212ENST00000596549 ACHEP22303 614 aa11.14□□□□□ -0.63
LIG1-212ENST00000596549 SDHAP31040 664 aa11.14□□□□□ -0.63
LIG1-212ENST00000596549 MSX2P35548 267 aaPredicted RBP11.14□□□□□ -0.63
LIG1-212ENST00000596549 RPL4P36578 427 aaKnown RBP11.14□□□□□ -0.63
LIG1-212ENST00000596549 MPV17P39210 176 aa11.14□□□□□ -0.63
LIG1-212ENST00000596549 CDH15P55291 814 aa11.14□□□□□ -0.63
LIG1-212ENST00000596549 CCNIQ14094 377 aa11.14□□□□□ -0.63
LIG1-212ENST00000596549 FAM120AOSQ5T036 256 aa11.14□□□□□ -0.63
LIG1-212ENST00000596549 SPATA46Q5T0L3 261 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms