RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 ADCK1Q86TW2 530 aa9.62□□□□□ -0.87
LIG1-211ENST00000596457 FBXL14Q8N1E6 418 aa9.62□□□□□ -0.87
LIG1-211ENST00000596457 ATG16L2Q8NAA4 619 aa9.62□□□□□ -0.87
LIG1-211ENST00000596457 AKR7LQ8NHP1 331 aa9.62□□□□□ -0.87
LIG1-211ENST00000596457 TEX47Q8TBZ9 253 aa9.62□□□□□ -0.87
LIG1-211ENST00000596457 PYDC1Q8WXC3 89 aa9.62□□□□□ -0.87
LIG1-211ENST00000596457 LRTOMTQ8WZ04 291 aa9.62□□□□□ -0.87
LIG1-211ENST00000596457 NABP1Q96AH0 204 aa9.62□□□□□ -0.87
LIG1-211ENST00000596457 PERPQ96FX8 193 aa9.62□□□□□ -0.87
LIG1-211ENST00000596457 DHRS9Q9BPW9 319 aa9.62□□□□□ -0.87
LIG1-211ENST00000596457 SEMA6AQ9H2E6 1030 aa9.62□□□□□ -0.87
LIG1-211ENST00000596457 OR51B6Q9H340 312 aa9.62□□□□□ -0.87
LIG1-211ENST00000596457 MOV10Q9HCE1 1003 aaKnown RBP9.62□□□□□ -0.87
LIG1-211ENST00000596457 RPRD1BQ9NQG5 326 aaKnown RBP9.62□□□□□ -0.87
LIG1-211ENST00000596457 FAIMQ9NVQ4 179 aa9.62□□□□□ -0.87
LIG1-211ENST00000596457 VSX1Q9NZR4 365 aaPredicted RBP9.62□□□□□ -0.87
LIG1-211ENST00000596457 KIF17Q9P2E2 1029 aa9.62□□□□□ -0.87
LIG1-211ENST00000596457 IGHV2OR16-5A0A0B4J2B6 119 aa9.61□□□□□ -0.87
LIG1-211ENST00000596457 ARPC3O15145 178 aa9.61□□□□□ -0.87
LIG1-211ENST00000596457 IDH3BO43837 385 aa9.61□□□□□ -0.87
LIG1-211ENST00000596457 AHCYL1O43865 530 aa9.61□□□□□ -0.87
LIG1-211ENST00000596457 MPZL1O95297 269 aa9.61□□□□□ -0.87
LIG1-211ENST00000596457 APEHP13798 732 aaKnown RBP9.61□□□□□ -0.87
LIG1-211ENST00000596457 ANXA8P13928 327 aa9.61□□□□□ -0.87
LIG1-211ENST00000596457 ZNF14P17017 642 aaPredicted RBP9.61□□□□□ -0.87
LIG1-211ENST00000596457 MSR1P21757 451 aa9.61□□□□□ -0.87
LIG1-211ENST00000596457 CCNOP22674 350 aa9.61□□□□□ -0.87
LIG1-211ENST00000596457 FASP25445 335 aa9.61□□□□□ -0.87
LIG1-211ENST00000596457 APEX1P27695 318 aaKnown RBP9.61□□□□□ -0.87
LIG1-211ENST00000596457 APLNRP35414 380 aa9.61□□□□□ -0.87
LIG1-211ENST00000596457 GALK2Q01415 458 aa9.61□□□□□ -0.87
LIG1-211ENST00000596457 DAG1Q14118 895 aa9.61□□□□□ -0.87
LIG1-211ENST00000596457 PGGHGQ32M88 737 aa9.61□□□□□ -0.87
LIG1-211ENST00000596457 C3orf36Q3SXR2 165 aa9.61□□□□□ -0.87
LIG1-211ENST00000596457 SLC36A3Q495N2 470 aa9.61□□□□□ -0.87
LIG1-211ENST00000596457 PABPC1L2AQ5JQF8 200 aa9.61□□□□□ -0.87
LIG1-211ENST00000596457 AGAP6Q5VW22 663 aa9.61□□□□□ -0.87
LIG1-211ENST00000596457 DNM1P34Q6PK57 102 aa9.61□□□□□ -0.87
LIG1-211ENST00000596457 UGT2A3Q6UWM9 527 aa9.61□□□□□ -0.87
LIG1-211ENST00000596457 IQCF1Q8N6M8 205 aa9.61□□□□□ -0.87
LIG1-211ENST00000596457 FAM169BQ8N8A8 192 aa9.61□□□□□ -0.87
LIG1-211ENST00000596457 CYB561A3Q8NBI2 242 aa9.61□□□□□ -0.87
LIG1-211ENST00000596457 OR4Q3Q8NH05 313 aa9.61□□□□□ -0.87
LIG1-211ENST00000596457 OR5K1Q8NHB7 308 aa9.61□□□□□ -0.87
LIG1-211ENST00000596457 OTULINQ96BN8 352 aa9.61□□□□□ -0.87
LIG1-211ENST00000596457 FBXO17Q96EF6 278 aa9.61□□□□□ -0.87
LIG1-211ENST00000596457 ZNF75AQ96N20 296 aa9.61□□□□□ -0.87
LIG1-211ENST00000596457 ZNF416Q9BWM5 594 aa9.61□□□□□ -0.87
LIG1-211ENST00000596457 CXorf56Q9H5V9 222 aa9.61□□□□□ -0.87
LIG1-211ENST00000596457 NTN4Q9HB63 628 aa9.61□□□□□ -0.87
LIG1-211ENST00000596457 CDH20Q9HBT6 801 aa9.61□□□□□ -0.87
LIG1-211ENST00000596457 POLE4Q9NR33 117 aa9.61□□□□□ -0.87
LIG1-211ENST00000596457 BEX4Q9NWD9 120 aaPredicted RBP9.61□□□□□ -0.87
LIG1-211ENST00000596457 IL20Q9NYY1 176 aa9.61□□□□□ -0.87
LIG1-211ENST00000596457 B9D1Q9UPM9 204 aa9.61□□□□□ -0.87
LIG1-211ENST00000596457 POLR1DQ9Y2S0 133 aa9.61□□□□□ -0.87
LIG1-211ENST00000596457 OR6C68A6NDL8 312 aa9.6□□□□□ -0.87
LIG1-211ENST00000596457 DCTN6O00399 190 aa9.6□□□□□ -0.87
LIG1-211ENST00000596457 BHLHE40O14503 412 aa9.6□□□□□ -0.87
LIG1-211ENST00000596457 MGRN1O60291 552 aa9.6□□□□□ -0.87
LIG1-211ENST00000596457 PTHP01270 115 aa9.6□□□□□ -0.87
LIG1-211ENST00000596457 HLA-DQA2P01906 255 aa9.6□□□□□ -0.87
LIG1-211ENST00000596457 TP53P04637 393 aaPredicted RBP9.6□□□□□ -0.87
LIG1-211ENST00000596457 SERPINA5P05154 406 aa9.6□□□□□ -0.87
LIG1-211ENST00000596457 CST2P09228 141 aa9.6□□□□□ -0.87
LIG1-211ENST00000596457 DANCRP0C864 163 aa9.6□□□□□ -0.87
LIG1-211ENST00000596457 CD99P14209 185 aa9.6□□□□□ -0.87
LIG1-211ENST00000596457 ZNF23P17027 643 aa9.6□□□□□ -0.87
LIG1-211ENST00000596457 CRABP1P29762 137 aa9.6□□□□□ -0.87
LIG1-211ENST00000596457 APOBEC3AP31941 199 aaPredicted RBP9.6□□□□□ -0.87
LIG1-211ENST00000596457 TTKP33981 857 aa9.6□□□□□ -0.87
LIG1-211ENST00000596457 THBS4P35443 961 aa9.6□□□□□ -0.87
LIG1-211ENST00000596457 PCBD1P61457 104 aa9.6□□□□□ -0.87
LIG1-211ENST00000596457 NKX6-1P78426 367 aaPredicted RBP9.6□□□□□ -0.87
LIG1-211ENST00000596457 HGFACQ04756 655 aa9.6□□□□□ -0.87
LIG1-211ENST00000596457 COX10Q12887 443 aa9.6□□□□□ -0.87
LIG1-211ENST00000596457 SNTB2Q13425 540 aaKnown RBP9.6□□□□□ -0.87
LIG1-211ENST00000596457 ENDOGQ14249 297 aaKnown RBP9.6□□□□□ -0.87
LIG1-211ENST00000596457 ATP6AP1Q15904 470 aa9.6□□□□□ -0.87
LIG1-211ENST00000596457 MEP1BQ16820 701 aa9.6□□□□□ -0.87
LIG1-211ENST00000596457 TBC1D28Q2M2D7 210 aa9.6□□□□□ -0.87
LIG1-211ENST00000596457 NRN1LQ496H8 165 aa9.6□□□□□ -0.87
LIG1-211ENST00000596457 FAM27BQ5VT28 67 aa9.6□□□□□ -0.87
LIG1-211ENST00000596457 SHQ1Q6PI26 577 aaKnown RBP9.6□□□□□ -0.87
LIG1-211ENST00000596457 DPPA2Q7Z7J5 298 aa9.6□□□□□ -0.87
LIG1-211ENST00000596457 TGIF2LYQ8IUE0 185 aa9.6□□□□□ -0.87
LIG1-211ENST00000596457 ZNF584Q8IVC4 421 aa9.6□□□□□ -0.87
LIG1-211ENST00000596457 GLB1L2Q8IW92 636 aa9.6□□□□□ -0.87
LIG1-211ENST00000596457 MUC15Q8N387 334 aa9.6□□□□□ -0.87
LIG1-211ENST00000596457 SLC37A3Q8NCC5 494 aa9.6□□□□□ -0.87
LIG1-211ENST00000596457 ICA1LQ8NDH6 482 aa9.6□□□□□ -0.87
LIG1-211ENST00000596457 SLC30A7Q8NEW0 376 aa9.6□□□□□ -0.87
LIG1-211ENST00000596457 IL17RDQ8NFM7 739 aa9.6□□□□□ -0.87
LIG1-211ENST00000596457 OR2T33Q8NG76 320 aa9.6□□□□□ -0.87
LIG1-211ENST00000596457 OR4F15Q8NGB8 312 aa9.6□□□□□ -0.87
LIG1-211ENST00000596457 C11orf40Q8WZ69 217 aa9.6□□□□□ -0.87
LIG1-211ENST00000596457 RAB3IPQ96QF0 476 aaPredicted RBP9.6□□□□□ -0.87
LIG1-211ENST00000596457 BDH2Q9BUT1 245 aa9.6□□□□□ -0.87
LIG1-211ENST00000596457 REV1Q9UBZ9 1251 aa9.6□□□□□ -0.87
LIG1-211ENST00000596457 KLHL21Q9UJP4 597 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms