RNA–Protein interactions for RNA: ENST00000592960.1

PKN1-215, Transcript of protein kinase N1, human

TSL 3

Gene PKN1, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKN1-215	ENST00000592960	B3GAT1	Q9P2W7	334 aa		13.22	□□□□□ -0.29
PKN1-215	ENST00000592960		A6NIZ1	184 aa		13.21	□□□□□ -0.29
PKN1-215	ENST00000592960	NPIPB13	A6NJU9	1138 aa		13.21	□□□□□ -0.29
PKN1-215	ENST00000592960	FAM183A	A6NL82	134 aa		13.21	□□□□□ -0.29
PKN1-215	ENST00000592960	ZNF814	B7Z6K7	855 aa		13.21	□□□□□ -0.29
PKN1-215	ENST00000592960	NPIPB4	C9JG80	1138 aa		13.21	□□□□□ -0.29
PKN1-215	ENST00000592960	SMAD9	O15198	467 aa	Known RBP	13.21	□□□□□ -0.29
PKN1-215	ENST00000592960	PRODH	O43272	600 aa		13.21	□□□□□ -0.29
PKN1-215	ENST00000592960	CD5L	O43866	347 aa		13.21	□□□□□ -0.29
PKN1-215	ENST00000592960	AQP8	O94778	261 aa		13.21	□□□□□ -0.29
PKN1-215	ENST00000592960	SYNGR4	O95473	234 aa		13.21	□□□□□ -0.29
PKN1-215	ENST00000592960	REN	P00797	406 aa		13.21	□□□□□ -0.29
PKN1-215	ENST00000592960	FCGR2A	P12318	317 aa		13.21	□□□□□ -0.29
PKN1-215	ENST00000592960	HLA-DOB	P13765	273 aa		13.21	□□□□□ -0.29
PKN1-215	ENST00000592960	IFNGR1	P15260	489 aa		13.21	□□□□□ -0.29
PKN1-215	ENST00000592960	ZNF43	P17038	809 aa		13.21	□□□□□ -0.29
PKN1-215	ENST00000592960	EEF1B2	P24534	225 aa	Known RBP	13.21	□□□□□ -0.29
PKN1-215	ENST00000592960	CDH11	P55287	796 aa		13.21	□□□□□ -0.29
PKN1-215	ENST00000592960	GABARAPL2	P60520	117 aa		13.21	□□□□□ -0.29
PKN1-215	ENST00000592960	RAP1B	P61224	184 aa		13.21	□□□□□ -0.29
PKN1-215	ENST00000592960	RAP1A	P62834	184 aa		13.21	□□□□□ -0.29
PKN1-215	ENST00000592960	MELK	Q14680	651 aa		13.21	□□□□□ -0.29
PKN1-215	ENST00000592960	MEST	Q5EB52	335 aa		13.21	□□□□□ -0.29
PKN1-215	ENST00000592960	ZNF362	Q5T0B9	420 aa	Predicted RBP	13.21	□□□□□ -0.29
PKN1-215	ENST00000592960	FAM205BP	Q63HN1	556 aa		13.21	□□□□□ -0.29
PKN1-215	ENST00000592960	DNM1P46	Q6ZS02	220 aa		13.21	□□□□□ -0.29
PKN1-215	ENST00000592960	ADCK1	Q86TW2	530 aa		13.21	□□□□□ -0.29
PKN1-215	ENST00000592960	ARIH2OS	Q8N7S6	290 aa		13.21	□□□□□ -0.29
PKN1-215	ENST00000592960	CYB561A3	Q8NBI2	242 aa		13.21	□□□□□ -0.29
PKN1-215	ENST00000592960	ZNF540	Q8NDQ6	660 aa		13.21	□□□□□ -0.29
PKN1-215	ENST00000592960	OR6K3	Q8NGY3	331 aa		13.21	□□□□□ -0.29
PKN1-215	ENST00000592960	ASB10	Q8WXI3	467 aa		13.21	□□□□□ -0.29
PKN1-215	ENST00000592960	RFK	Q969G6	155 aa		13.21	□□□□□ -0.29
PKN1-215	ENST00000592960	PLPPR2	Q96GM1	343 aa		13.21	□□□□□ -0.29
PKN1-215	ENST00000592960	NMNAT3	Q96T66	252 aa		13.21	□□□□□ -0.29
PKN1-215	ENST00000592960	AMBN	Q9NP70	447 aa		13.21	□□□□□ -0.29
PKN1-215	ENST00000592960	KLHL13	Q9P2N7	655 aa		13.21	□□□□□ -0.29
PKN1-215	ENST00000592960	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	13.21	□□□□□ -0.29
PKN1-215	ENST00000592960	LAMP3	Q9UQV4	416 aa		13.21	□□□□□ -0.29
PKN1-215	ENST00000592960	RPL36	Q9Y3U8	105 aa	Known RBP	13.21	□□□□□ -0.29
PKN1-215	ENST00000592960	LOC102725191	A0A1B0GVB3	256 aa		13.2	□□□□□ -0.3
PKN1-215	ENST00000592960	PTGES3L	E9PB15	166 aa		13.2	□□□□□ -0.3
PKN1-215	ENST00000592960	RAMP1	O60894	148 aa		13.2	□□□□□ -0.3
PKN1-215	ENST00000592960	KLHL12	Q53G59	568 aa		13.2	□□□□□ -0.3
PKN1-215	ENST00000592960	AADACL4	Q5VUY2	407 aa		13.2	□□□□□ -0.3
PKN1-215	ENST00000592960	FCRLA	Q7L513	359 aa		13.2	□□□□□ -0.3
PKN1-215	ENST00000592960	HDDC2	Q7Z4H3	204 aa		13.2	□□□□□ -0.3
PKN1-215	ENST00000592960	MAPK1IP1L	Q8NDC0	245 aa		13.2	□□□□□ -0.3
PKN1-215	ENST00000592960	NPEPL1	Q8NDH3	523 aa		13.2	□□□□□ -0.3
PKN1-215	ENST00000592960	BBS1	Q8NFJ9	593 aa		13.2	□□□□□ -0.3
PKN1-215	ENST00000592960	LILRB1	Q8NHL6	650 aa	Predicted RBP	13.2	□□□□□ -0.3
PKN1-215	ENST00000592960	ZNF519	Q8TB69	540 aa		13.2	□□□□□ -0.3
PKN1-215	ENST00000592960	IPCEF1	Q8WWN9	437 aa	Predicted RBP	13.2	□□□□□ -0.3
PKN1-215	ENST00000592960	AKAP1	Q92667	903 aa	Known RBP eCLIP	13.2	□□□□□ -0.3
PKN1-215	ENST00000592960	TRMT61A	Q96FX7	289 aa	Known RBP	13.2	□□□□□ -0.3
PKN1-215	ENST00000592960	GMPPA	Q96IJ6	420 aa	Predicted RBP	13.2	□□□□□ -0.3
PKN1-215	ENST00000592960	SNX18	Q96RF0	628 aa		13.2	□□□□□ -0.3
PKN1-215	ENST00000592960	MED20	Q9H944	212 aa		13.2	□□□□□ -0.3
PKN1-215	ENST00000592960	CCNB1IP1	Q9NPC3	277 aa		13.2	□□□□□ -0.3
PKN1-215	ENST00000592960	SCOC	Q9UIL1	159 aa		13.2	□□□□□ -0.3
PKN1-215	ENST00000592960	MCTS1	Q9ULC4	181 aa	Known RBP	13.2	□□□□□ -0.3
PKN1-215	ENST00000592960	EMC9	Q9Y3B6	208 aa		13.2	□□□□□ -0.3
PKN1-215	ENST00000592960	CR1	P17927	2039 aa		13.2	□□□□□ -0.3
PKN1-215	ENST00000592960	EFCAB10	A6NFE3	127 aa		13.19	□□□□□ -0.3
PKN1-215	ENST00000592960		H7C1C5	153 aa		13.19	□□□□□ -0.3
PKN1-215	ENST00000592960	TRAF3IP2	O43734	574 aa	Predicted RBP	13.19	□□□□□ -0.3
PKN1-215	ENST00000592960	SS18L1	O75177	396 aa	Predicted RBP	13.19	□□□□□ -0.3
PKN1-215	ENST00000592960	F12	P00748	615 aa	Predicted RBP	13.19	□□□□□ -0.3
PKN1-215	ENST00000592960	DANCR	P0C864	163 aa		13.19	□□□□□ -0.3
PKN1-215	ENST00000592960	DBT	P11182	482 aa	Known RBP	13.19	□□□□□ -0.3
PKN1-215	ENST00000592960	PSMB1	P20618	241 aa	Known RBP	13.19	□□□□□ -0.3
PKN1-215	ENST00000592960	CDKN2A	P42771	156 aa	Known RBP	13.19	□□□□□ -0.3
PKN1-215	ENST00000592960	BID	P55957	195 aa		13.19	□□□□□ -0.3
PKN1-215	ENST00000592960	RPS7	P62081	194 aa	Known RBP	13.19	□□□□□ -0.3
PKN1-215	ENST00000592960	LCN6	P62502	163 aa		13.19	□□□□□ -0.3
PKN1-215	ENST00000592960	ZNF91	Q05481	1191 aa		13.19	□□□□□ -0.3
PKN1-215	ENST00000592960	LGALS3BP	Q08380	585 aa		13.19	□□□□□ -0.3
PKN1-215	ENST00000592960	APOF	Q13790	326 aa		13.19	□□□□□ -0.3
PKN1-215	ENST00000592960	ARMC4	Q5T2S8	1044 aa		13.19	□□□□□ -0.3
PKN1-215	ENST00000592960	ABLIM2	Q6H8Q1	611 aa		13.19	□□□□□ -0.3
PKN1-215	ENST00000592960	NIPAL3	Q6P499	406 aa		13.19	□□□□□ -0.3
PKN1-215	ENST00000592960	BEND4	Q6ZU67	534 aa		13.19	□□□□□ -0.3
PKN1-215	ENST00000592960	AHSA2	Q719I0	299 aa		13.19	□□□□□ -0.3
PKN1-215	ENST00000592960	MEPCE	Q7L2J0	689 aa	Known RBP	13.19	□□□□□ -0.3
PKN1-215	ENST00000592960	TSPAN14	Q8NG11	270 aa		13.19	□□□□□ -0.3
PKN1-215	ENST00000592960	OR9K2	Q8NGE7	335 aa		13.19	□□□□□ -0.3
PKN1-215	ENST00000592960	OR9Q1	Q8NGQ5	310 aa		13.19	□□□□□ -0.3
PKN1-215	ENST00000592960	ROBO4	Q8WZ75	1007 aa		13.19	□□□□□ -0.3
PKN1-215	ENST00000592960	GGH	Q92820	318 aa		13.19	□□□□□ -0.3
PKN1-215	ENST00000592960	TXNDC15	Q96J42	360 aa		13.19	□□□□□ -0.3
PKN1-215	ENST00000592960	SF3B5	Q9BWJ5	86 aa	Known RBP	13.19	□□□□□ -0.3
PKN1-215	ENST00000592960	PRRG4	Q9BZD6	226 aa		13.19	□□□□□ -0.3
PKN1-215	ENST00000592960	OR51V1	Q9H2C8	321 aa		13.19	□□□□□ -0.3
PKN1-215	ENST00000592960	GLRX2	Q9NS18	164 aa		13.19	□□□□□ -0.3
PKN1-215	ENST00000592960	MED29	Q9NX70	200 aa		13.19	□□□□□ -0.3
PKN1-215	ENST00000592960	PSORS1C1	Q9UIG5	152 aa		13.19	□□□□□ -0.3
PKN1-215	ENST00000592960		A0A087WXM4	84 aa		13.18	□□□□□ -0.3
PKN1-215	ENST00000592960	IRGM	A1A4Y4	181 aa		13.18	□□□□□ -0.3
PKN1-215	ENST00000592960	PRSS37	A4D1T9	235 aa		13.18	□□□□□ -0.3
PKN1-215	ENST00000592960	OR6C68	A6NDL8	312 aa		13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms