RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 C16orf58Q96GQ5 468 aa5.68□□□□□ -1.5
SMAD4-212ENST00000591126 SMIM14Q96QK8 99 aa5.68□□□□□ -1.5
SMAD4-212ENST00000591126 PHB2Q99623 299 aa5.68□□□□□ -1.5
SMAD4-212ENST00000591126 ZNF701Q9NV72 531 aaPredicted RBP5.68□□□□□ -1.5
SMAD4-212ENST00000591126 IL19Q9UHD0 177 aa5.68□□□□□ -1.5
SMAD4-212ENST00000591126 UBE2J1Q9Y385 318 aaPredicted RBP5.68□□□□□ -1.5
SMAD4-212ENST00000591126 MCM3APO60318 1980 aa5.68□□□□□ -1.5
SMAD4-212ENST00000591126 NPIPA5A0A0B4J1W7 369 aa5.68□□□□□ -1.5
SMAD4-212ENST00000591126 ARRDC5A6NEK1 342 aa5.68□□□□□ -1.5
SMAD4-212ENST00000591126 TMEM210A6NLX4 147 aa5.68□□□□□ -1.5
SMAD4-212ENST00000591126 NPIPA7E9PJI5 369 aa5.68□□□□□ -1.5
SMAD4-212ENST00000591126 WBP4O75554 376 aaKnown RBP5.68□□□□□ -1.5
SMAD4-212ENST00000591126 NPIPA8P0DM63 369 aa5.68□□□□□ -1.5
SMAD4-212ENST00000591126 RBP2P50120 134 aa5.68□□□□□ -1.5
SMAD4-212ENST00000591126 ZNF83P51522 516 aa5.68□□□□□ -1.5
SMAD4-212ENST00000591126 MEF2DQ14814 521 aa5.68□□□□□ -1.5
SMAD4-212ENST00000591126 TESK1Q15569 626 aa5.68□□□□□ -1.5
SMAD4-212ENST00000591126 CEACAM16Q2WEN9 425 aa5.68□□□□□ -1.5
SMAD4-212ENST00000591126 KHDC1LQ5JSQ8 128 aa5.68□□□□□ -1.5
SMAD4-212ENST00000591126 NXNL2Q5VZ03 156 aa5.68□□□□□ -1.5
SMAD4-212ENST00000591126 SPNS3Q6ZMD2 512 aa5.68□□□□□ -1.5
SMAD4-212ENST00000591126 GABRG1Q8N1C3 465 aa5.68□□□□□ -1.5
SMAD4-212ENST00000591126 SUMF1Q8NBK3 374 aa5.68□□□□□ -1.5
SMAD4-212ENST00000591126 OR9I1Q8NGQ6 314 aa5.68□□□□□ -1.5
SMAD4-212ENST00000591126 SLC25A40Q8TBP6 338 aa5.68□□□□□ -1.5
SMAD4-212ENST00000591126 ARPC5LQ9BPX5 153 aa5.68□□□□□ -1.5
SMAD4-212ENST00000591126 INPP5KQ9BT40 448 aa5.68□□□□□ -1.5
SMAD4-212ENST00000591126 TRIM8Q9BZR9 551 aa5.68□□□□□ -1.5
SMAD4-212ENST00000591126 OR2B2Q9GZK3 357 aa5.68□□□□□ -1.5
SMAD4-212ENST00000591126 ADAM19Q9H013 955 aa5.68□□□□□ -1.5
SMAD4-212ENST00000591126 SLC6A15Q9H2J7 730 aa5.68□□□□□ -1.5
SMAD4-212ENST00000591126 HINT3Q9NQE9 182 aaKnown RBP5.68□□□□□ -1.5
SMAD4-212ENST00000591126 KLK13Q9UKR3 277 aa5.68□□□□□ -1.5
SMAD4-212ENST00000591126 TDRD15B5MCY1 1934 aaKnown RBP5.68□□□□□ -1.5
SMAD4-212ENST00000591126 LRRN3E7EW58 273 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 NPIPB8E9PQR5 432 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 M0R135 149 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 SERPINE2P07093 398 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 CHRM2P08172 466 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 ERGP11308 486 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 CD36P16671 472 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 MDH2P40926 338 aaKnown RBP5.67□□□□□ -1.5
SMAD4-212ENST00000591126 AQP2P41181 271 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 MAGEA5P43359 124 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 TMEM267Q0VDI3 215 aaPredicted RBP5.67□□□□□ -1.5
SMAD4-212ENST00000591126 SNTB2Q13425 540 aaKnown RBP5.67□□□□□ -1.5
SMAD4-212ENST00000591126 PIN1Q13526 163 aaPredicted RBP5.67□□□□□ -1.5
SMAD4-212ENST00000591126 KHDC1Q4VXA5 237 aaKnown RBP5.67□□□□□ -1.5
SMAD4-212ENST00000591126 KIRREL2Q6UWL6 708 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 DOLPP1Q86YN1 238 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 SLC22A24Q8N4F4 322 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 COQ8AQ8NI60 647 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 ZNF799Q96GE5 643 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 PAIP1Q9H074 479 aaKnown RBP5.67□□□□□ -1.5
SMAD4-212ENST00000591126 ARMC1Q9NVT9 282 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 LUZP4Q9P127 313 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 A0A075B6Q4 140 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 BHLHE40O14503 412 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 GPR137BO60478 399 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 RAF1P04049 648 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 GTF2F2P13984 249 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 GABRB3P28472 473 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 BDKRB2P30411 391 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 MRPL19P49406 292 aaKnown RBP5.67□□□□□ -1.5
SMAD4-212ENST00000591126 METAP1P53582 386 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 GNG3P63215 75 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 PRKCDQ05655 676 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 ZNF782Q6ZMW2 699 aaPredicted RBP5.67□□□□□ -1.5
SMAD4-212ENST00000591126 VN1R4Q7Z5H5 301 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 FAM185AQ8N0U4 392 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 OR1F12Q8NHA8 337 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 PP6455Q8WZ26 134 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 DCUN1D4Q92564 292 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 EMG1Q92979 244 aaKnown RBP5.67□□□□□ -1.5
SMAD4-212ENST00000591126 ADGRG7Q96K78 797 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 TMEM68Q96MH6 324 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 QRSL1Q9H0R6 528 aaKnown RBP5.67□□□□□ -1.5
SMAD4-212ENST00000591126 OCEL1Q9H607 264 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 LPAR2Q9HBW0 351 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 VNN3Q9NY84 501 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 DNAJC27Q9NZQ0 273 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 RHCGQ9UBD6 479 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 BRCA1P38398 1863 aaKnown RBP5.67□□□□□ -1.5
SMAD4-212ENST00000591126 C5orf49A4QMS7 147 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 GABARAPH6UMI1 98 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 CRTAPO75718 401 aaPredicted RBP5.67□□□□□ -1.5
SMAD4-212ENST00000591126 GABARAPO95166 117 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 SOX14O95416 240 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 CST2P09228 141 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 KCNJ3P48549 501 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 RAB7AP51149 207 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 LSM6P62312 80 aaKnown RBP5.67□□□□□ -1.5
SMAD4-212ENST00000591126 FZD5Q13467 585 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 PCOLCEQ15113 449 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 RPS26P11Q5JNZ5 115 aaPredicted RBP5.67□□□□□ -1.5
SMAD4-212ENST00000591126 HACD4Q5VWC8 232 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 LIPKQ5VXJ0 399 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 PLET1Q6UQ28 207 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 CPOQ8IVL8 374 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 LINC01555Q8NAE3 123 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms