RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 SELENBP1Q13228 472 aa13.19□□□□□ -0.3
RETREG3-208ENST00000589797 BEST3Q8N1M1 668 aa13.19□□□□□ -0.3
RETREG3-208ENST00000589797 SPERTQ8NA61 448 aa13.19□□□□□ -0.3
RETREG3-208ENST00000589797 BHLHE23Q8NDY6 225 aa13.19□□□□□ -0.3
RETREG3-208ENST00000589797 ABHD6Q9BV23 337 aa13.19□□□□□ -0.3
RETREG3-208ENST00000589797 PLEKHB1Q9UF11 243 aaPredicted RBP13.19□□□□□ -0.3
RETREG3-208ENST00000589797 R4GN57 208 aa13.19□□□□□ -0.3
RETREG3-208ENST00000589797 MEGF11A6BM72 1044 aa13.19□□□□□ -0.3
RETREG3-208ENST00000589797 BHLHE40O14503 412 aa13.19□□□□□ -0.3
RETREG3-208ENST00000589797 TPD52L2O43399 206 aaKnown RBP13.19□□□□□ -0.3
RETREG3-208ENST00000589797 HOXB9P17482 250 aaPredicted RBP13.19□□□□□ -0.3
RETREG3-208ENST00000589797 ANXA7P20073 488 aaKnown RBP13.19□□□□□ -0.3
RETREG3-208ENST00000589797 CDK2P24941 298 aa13.19□□□□□ -0.3
RETREG3-208ENST00000589797 LCN10Q6JVE6 187 aa13.19□□□□□ -0.3
RETREG3-208ENST00000589797 ZNF615Q8N8J6 731 aa13.19□□□□□ -0.3
RETREG3-208ENST00000589797 ACKR4Q9NPB9 350 aa13.19□□□□□ -0.3
RETREG3-208ENST00000589797 ACAD8Q9UKU7 415 aa13.19□□□□□ -0.3
RETREG3-208ENST00000589797 HSPB6O14558 160 aa13.19□□□□□ -0.3
RETREG3-208ENST00000589797 PSMB1P20618 241 aaKnown RBP13.19□□□□□ -0.3
RETREG3-208ENST00000589797 TBXA2RP21731 343 aa13.19□□□□□ -0.3
RETREG3-208ENST00000589797 ACAA2P42765 397 aaKnown RBP13.19□□□□□ -0.3
RETREG3-208ENST00000589797 CSNK2A1P68400 391 aaPredicted RBP13.19□□□□□ -0.3
RETREG3-208ENST00000589797 TMEM201Q5SNT2 666 aa13.19□□□□□ -0.3
RETREG3-208ENST00000589797 PRR18Q8N4B5 295 aa13.19□□□□□ -0.3
RETREG3-208ENST00000589797 CSNK2A3Q8NEV1 391 aa13.19□□□□□ -0.3
RETREG3-208ENST00000589797 PIGCQ92535 297 aa13.19□□□□□ -0.3
RETREG3-208ENST00000589797 MESP1Q9BRJ9 268 aa13.19□□□□□ -0.3
RETREG3-208ENST00000589797 KCNK15Q9H427 330 aa13.19□□□□□ -0.3
RETREG3-208ENST00000589797 B4GALT7Q9UBV7 327 aa13.19□□□□□ -0.3
RETREG3-208ENST00000589797 WRBO00258 174 aa13.18□□□□□ -0.3
RETREG3-208ENST00000589797 EPXP11678 715 aa13.18□□□□□ -0.3
RETREG3-208ENST00000589797 ARG2P78540 354 aa13.18□□□□□ -0.3
RETREG3-208ENST00000589797 RSU1Q15404 277 aa13.18□□□□□ -0.3
RETREG3-208ENST00000589797 YIF1BQ5BJH7 314 aa13.18□□□□□ -0.3
RETREG3-208ENST00000589797 TMEM81Q6P7N7 255 aa13.18□□□□□ -0.3
RETREG3-208ENST00000589797 CD300LDQ6UXZ3 194 aa13.18□□□□□ -0.3
RETREG3-208ENST00000589797 OR56B4Q8NH76 319 aa13.18□□□□□ -0.3
RETREG3-208ENST00000589797 THAP6Q8TBB0 222 aa13.18□□□□□ -0.3
RETREG3-208ENST00000589797 FKRPQ9H9S5 495 aa13.18□□□□□ -0.3
RETREG3-208ENST00000589797 TP53BP1Q12888 1972 aaPredicted RBP13.18□□□□□ -0.3
RETREG3-208ENST00000589797 SCN8AQ9UQD0 1980 aa13.18□□□□□ -0.3
RETREG3-208ENST00000589797 CTLA4P16410 223 aa13.18□□□□□ -0.3
RETREG3-208ENST00000589797 SPINK2P20155 84 aa13.18□□□□□ -0.3
RETREG3-208ENST00000589797 RBMS1P29558 406 aaKnown RBP13.18□□□□□ -0.3
RETREG3-208ENST00000589797 AAED1Q7RTV5 226 aa13.18□□□□□ -0.3
RETREG3-208ENST00000589797 CLEC1AQ8NC01 280 aa13.18□□□□□ -0.3
RETREG3-208ENST00000589797 OR10AC1Q8NH08 325 aa13.18□□□□□ -0.3
RETREG3-208ENST00000589797 SLC7A6Q92536 515 aa13.18□□□□□ -0.3
RETREG3-208ENST00000589797 KCTD12Q96CX2 325 aaKnown RBP13.18□□□□□ -0.3
RETREG3-208ENST00000589797 PFDN2Q9UHV9 154 aa13.18□□□□□ -0.3
RETREG3-208ENST00000589797 HRH3Q9Y5N1 445 aa13.18□□□□□ -0.3
RETREG3-208ENST00000589797 LOC107986453A0A1B0GWG9 222 aa13.18□□□□□ -0.3
RETREG3-208ENST00000589797 TMEM235A6NFC5 223 aa13.18□□□□□ -0.3
RETREG3-208ENST00000589797 TSPAN4O14817 238 aa13.18□□□□□ -0.3
RETREG3-208ENST00000589797 GUSBP08236 651 aa13.18□□□□□ -0.3
RETREG3-208ENST00000589797 IL32P24001 234 aa13.18□□□□□ -0.3
RETREG3-208ENST00000589797 ANGPTL5Q86XS5 388 aa13.18□□□□□ -0.3
RETREG3-208ENST00000589797 IQCF2Q8IXL9 164 aa13.18□□□□□ -0.3
RETREG3-208ENST00000589797 BPIFB2Q8N4F0 458 aa13.18□□□□□ -0.3
RETREG3-208ENST00000589797 THOC3Q96J01 351 aaKnown RBP13.18□□□□□ -0.3
RETREG3-208ENST00000589797 HYLS1Q96M11 299 aa13.18□□□□□ -0.3
RETREG3-208ENST00000589797 IFITM5A6NNB3 132 aa13.17□□□□□ -0.3
RETREG3-208ENST00000589797 TMEM229AB2RXF0 380 aa13.17□□□□□ -0.3
RETREG3-208ENST00000589797 SPDEFO95238 335 aa13.17□□□□□ -0.3
RETREG3-208ENST00000589797 IFNA7P01567 189 aa13.17□□□□□ -0.3
RETREG3-208ENST00000589797 DCTDP32321 178 aa13.17□□□□□ -0.3
RETREG3-208ENST00000589797 CBX5P45973 191 aa13.17□□□□□ -0.3
RETREG3-208ENST00000589797 CARD18P57730 90 aa13.17□□□□□ -0.3
RETREG3-208ENST00000589797 GABREP78334 506 aa13.17□□□□□ -0.3
RETREG3-208ENST00000589797 STK11Q15831 433 aa13.17□□□□□ -0.3
RETREG3-208ENST00000589797 DHRS13Q6UX07 377 aa13.17□□□□□ -0.3
RETREG3-208ENST00000589797 STAC2Q6ZMT1 411 aa13.17□□□□□ -0.3
RETREG3-208ENST00000589797 THRSPQ92748 146 aa13.17□□□□□ -0.3
RETREG3-208ENST00000589797 ITPKCQ96DU7 683 aa13.17□□□□□ -0.3
RETREG3-208ENST00000589797 SH3BGRL2Q9UJC5 107 aa13.17□□□□□ -0.3
RETREG3-208ENST00000589797 SNRNP200O75643 2136 aaKnown RBP13.17□□□□□ -0.3
RETREG3-208ENST00000589797 MED13LQ71F56 2210 aa13.17□□□□□ -0.3
RETREG3-208ENST00000589797 MTCL1Q9Y4B5 1905 aaKnown RBP13.17□□□□□ -0.3
RETREG3-208ENST00000589797 A6NLC8 198 aa13.17□□□□□ -0.3
RETREG3-208ENST00000589797 F5H0A9 414 aaPredicted RBP13.17□□□□□ -0.3
RETREG3-208ENST00000589797 EDN3P14138 238 aa13.17□□□□□ -0.3
RETREG3-208ENST00000589797 DCBLD2Q96PD2 775 aa13.17□□□□□ -0.3
RETREG3-208ENST00000589797 ABHD1Q96SE0 405 aa13.17□□□□□ -0.3
RETREG3-208ENST00000589797 TMEM43Q9BTV4 400 aa13.17□□□□□ -0.3
RETREG3-208ENST00000589797 ACTR6Q9GZN1 396 aa13.17□□□□□ -0.3
RETREG3-208ENST00000589797 PCDHGA1Q9Y5H4 931 aa13.17□□□□□ -0.3
RETREG3-208ENST00000589797 A6NCN8 305 aa13.17□□□□□ -0.3
RETREG3-208ENST00000589797 THY1P04216 161 aa13.17□□□□□ -0.3
RETREG3-208ENST00000589797 NGFRP08138 427 aa13.17□□□□□ -0.3
RETREG3-208ENST00000589797 HLA-DOBP13765 273 aa13.17□□□□□ -0.3
RETREG3-208ENST00000589797 HTR5AP47898 357 aa13.17□□□□□ -0.3
RETREG3-208ENST00000589797 GUCA2AQ02747 115 aa13.17□□□□□ -0.3
RETREG3-208ENST00000589797 POU4F3Q15319 338 aa13.17□□□□□ -0.3
RETREG3-208ENST00000589797 AKIRIN1Q9H9L7 192 aaPredicted RBP13.17□□□□□ -0.3
RETREG3-208ENST00000589797 PLEKHJ1Q9NW61 149 aa13.17□□□□□ -0.3
RETREG3-208ENST00000589797 NUBP2Q9Y5Y2 271 aa13.17□□□□□ -0.3
RETREG3-208ENST00000589797 PKDREJQ9NTG1 2253 aa13.17□□□□□ -0.3
RETREG3-208ENST00000589797 GGT3PA6NGU5 568 aa13.16□□□□□ -0.3
RETREG3-208ENST00000589797 DCTN6O00399 190 aa13.16□□□□□ -0.3
RETREG3-208ENST00000589797 DDAH2O95865 285 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms