RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 TBRG1Q3YBR2 411 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 SLC25A53Q5H9E4 307 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 ALG10BQ5I7T1 473 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 C3orf33Q6P1S2 294 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 ZNF613Q6PF04 617 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 ULK3Q6PHR2 472 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 KLHL24Q6TFL4 600 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 CASP12Q6UXS9 341 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 OLIG3Q7RTU3 272 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 GRINAQ7Z429 371 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 VTCN1Q7Z7D3 282 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 CCDC103Q8IW40 242 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 LINC00471Q8N535 108 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 ADAMTS16Q8TE57 1224 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 SLC25A43Q8WUT9 341 aaPredicted RBP5.16□□□□□ -1.58
VPS25-204ENST00000589577 CANT1Q8WVQ1 401 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 CNOT9Q92600 299 aaKnown RBP5.16□□□□□ -1.58
VPS25-204ENST00000589577 SLC38A4Q969I6 547 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 PPP1R14AQ96A00 147 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 ZHX1-C8orf76Q96EF9 292 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 MPP4Q96JB8 637 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 CHID1Q9BWS9 393 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 VCX3BQ9H321 246 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 PRDM13Q9H4Q3 707 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 ANKRD19PQ9H560 264 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 DENND2DQ9H6A0 471 aaPredicted RBP5.16□□□□□ -1.58
VPS25-204ENST00000589577 DCLRE1BQ9H816 532 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 ZNF556Q9HAH1 456 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 IL1RAPQ9NPH3 570 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 OBP2BQ9NPH6 170 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 RLIMQ9NVW2 624 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 KIF17Q9P2E2 1029 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 ENOPH1Q9UHY7 261 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 PURGQ9UJV8 347 aaKnown RBP5.16□□□□□ -1.58
VPS25-204ENST00000589577 RRP15Q9Y3B9 282 aaKnown RBP5.16□□□□□ -1.58
VPS25-204ENST00000589577 WIPI2Q9Y4P8 454 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 ORC6Q9Y5N6 252 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 FRAS1Q86XX4 4008 aa5.15□□□□□ -1.58
VPS25-204ENST00000589577 ARPC4-TTLL3A0A0A6YYG9 625 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 HTR3EA5X5Y0 456 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 OR6C65A6NJZ3 312 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 CLDN24A6NM45 220 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 SRRM5B3KS81 715 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 TRAPPC2LH3BP13 241 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 TNFRSF11BO00300 401 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 GPR171O14626 319 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 TRAF3IP2O43734 574 aaPredicted RBP5.15□□□□□ -1.59
VPS25-204ENST00000589577 CHP2O43745 196 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 CDC14BO60729 498 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 AHSA1O95433 338 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 PLATP00750 562 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 TFPIP10646 304 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 MAGEB1P43366 347 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 EVX1P49640 407 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 ERFP50548 548 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 SESN3P58005 492 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 TGFBR3Q03167 851 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 ZNF154Q13106 437 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 SNTB2Q13425 540 aaKnown RBP5.15□□□□□ -1.59
VPS25-204ENST00000589577 MFSD13AQ14CX5 517 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 QPRTQ15274 297 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 OR1Q1Q15612 314 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 MAPK11Q15759 364 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 NPTX1Q15818 432 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 ENTPD8Q5MY95 495 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 OR2T5Q6IEZ7 315 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 TTC33Q6PID6 262 aaPredicted RBP5.15□□□□□ -1.59
VPS25-204ENST00000589577 ZNF730Q6ZMV8 503 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 TMPPEQ6ZT21 453 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 LINGO2Q7L985 606 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 PIWIL3Q7Z3Z3 882 aaKnown RBP5.15□□□□□ -1.59
VPS25-204ENST00000589577 LRP11Q86VZ4 500 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 ADGRG3Q86Y34 549 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 ZDHHC13Q8IUH4 622 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 ADGRG5Q8IZF4 528 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 OFCC1Q8IZS5 231 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 CLIP4Q8N3C7 705 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 C10orf53Q8N6V4 93 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 LSMEM1Q8N8F7 131 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 FAM71CQ8NEG0 241 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 OR6T1Q8NGN1 323 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 OR1K1Q8NGR3 316 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 OR2T29Q8NH02 315 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 GPR119Q8TDV5 335 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 PYDC1Q8WXC3 89 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 UTP4Q969X6 686 aaKnown RBP5.15□□□□□ -1.59
VPS25-204ENST00000589577 PHF21AQ96BD5 680 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 DDIT4LQ96D03 193 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 ZG16BQ96DA0 208 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 DNAJA3Q96EY1 480 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 SLC41A3Q96GZ6 507 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 ARHGDIGQ99819 225 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 SYT3Q9BQG1 590 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 TAPBPLQ9BX59 468 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 TEX12Q9BXU0 123 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 MS4A7Q9GZW8 240 aaPredicted RBP5.15□□□□□ -1.59
VPS25-204ENST00000589577 MARCH7Q9H992 704 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 FN3KRPQ9HA64 309 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 C12orf10Q9HB07 376 aa5.15□□□□□ -1.59
VPS25-204ENST00000589577 NOX3Q9HBY0 568 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms