RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 SYT14Q8NB59 555 aa11.86□□□□□ -0.51
VMP1-209ENST00000588915 OR4D11Q8NGI4 311 aa11.86□□□□□ -0.51
VMP1-209ENST00000588915 FNDC8Q8TC99 324 aa11.86□□□□□ -0.51
VMP1-209ENST00000588915 KLF14Q8TD94 323 aaPredicted RBP11.86□□□□□ -0.51
VMP1-209ENST00000588915 SLC26A7Q8TE54 656 aa11.86□□□□□ -0.51
VMP1-209ENST00000588915 CGREF1Q99674 301 aa11.86□□□□□ -0.51
VMP1-209ENST00000588915 KAT8Q9H7Z6 458 aaKnown RBP11.86□□□□□ -0.51
VMP1-209ENST00000588915 MEPEQ9NQ76 525 aaPredicted RBP11.86□□□□□ -0.51
VMP1-209ENST00000588915 INIPQ9NRY2 104 aa11.86□□□□□ -0.51
VMP1-209ENST00000588915 CACNG2Q9Y698 323 aa11.86□□□□□ -0.51
VMP1-209ENST00000588915 HTR3EA5X5Y0 456 aa11.85□□□□□ -0.51
VMP1-209ENST00000588915 KPNA4O00629 521 aaPredicted RBP11.85□□□□□ -0.51
VMP1-209ENST00000588915 ZNF32P17041 273 aa11.85□□□□□ -0.51
VMP1-209ENST00000588915 MAKP20794 623 aa11.85□□□□□ -0.51
VMP1-209ENST00000588915 CCNOP22674 350 aa11.85□□□□□ -0.51
VMP1-209ENST00000588915 TUBG1P23258 451 aa11.85□□□□□ -0.51
VMP1-209ENST00000588915 PCGF2P35227 344 aa11.85□□□□□ -0.51
VMP1-209ENST00000588915 WNT5AP41221 380 aa11.85□□□□□ -0.51
VMP1-209ENST00000588915 GDI2P50395 445 aaKnown RBP11.85□□□□□ -0.51
VMP1-209ENST00000588915 ARMC4Q5T2S8 1044 aa11.85□□□□□ -0.51
VMP1-209ENST00000588915 CCDC80Q76M96 950 aa11.85□□□□□ -0.51
VMP1-209ENST00000588915 DOK3Q7L591 496 aa11.85□□□□□ -0.51
VMP1-209ENST00000588915 ZER1Q7Z7L7 766 aa11.85□□□□□ -0.51
VMP1-209ENST00000588915 DHDDSQ86SQ9 333 aa11.85□□□□□ -0.51
VMP1-209ENST00000588915 TSPYL5Q86VY4 417 aaPredicted RBP11.85□□□□□ -0.51
VMP1-209ENST00000588915 ZNF101Q8IZC7 436 aa11.85□□□□□ -0.51
VMP1-209ENST00000588915 VANGL1Q8TAA9 524 aaPredicted RBP11.85□□□□□ -0.51
VMP1-209ENST00000588915 SLC25A40Q8TBP6 338 aa11.85□□□□□ -0.51
VMP1-209ENST00000588915 LRRC8CQ8TDW0 803 aa11.85□□□□□ -0.51
VMP1-209ENST00000588915 IPCEF1Q8WWN9 437 aaPredicted RBP11.85□□□□□ -0.51
VMP1-209ENST00000588915 NABP1Q96AH0 204 aa11.85□□□□□ -0.51
VMP1-209ENST00000588915 NMD3Q96D46 503 aaKnown RBP11.85□□□□□ -0.51
VMP1-209ENST00000588915 NANOGQ9H9S0 305 aa11.85□□□□□ -0.51
VMP1-209ENST00000588915 ELOVL3Q9HB03 270 aa11.85□□□□□ -0.51
VMP1-209ENST00000588915 TUBG2Q9NRH3 451 aa11.85□□□□□ -0.51
VMP1-209ENST00000588915 NPTNQ9Y639 398 aa11.85□□□□□ -0.51
VMP1-209ENST00000588915 MEGF8Q7Z7M0 2845 aa11.85□□□□□ -0.51
VMP1-209ENST00000588915 LOC100509620A0A075B734 347 aa11.84□□□□□ -0.51
VMP1-209ENST00000588915 C5orf49A4QMS7 147 aa11.84□□□□□ -0.51
VMP1-209ENST00000588915 ANGPT2O15123 496 aa11.84□□□□□ -0.51
VMP1-209ENST00000588915 TMPRSS2O15393 492 aa11.84□□□□□ -0.51
VMP1-209ENST00000588915 SPRY3O43610 288 aa11.84□□□□□ -0.51
VMP1-209ENST00000588915 OR7A10O76100 309 aa11.84□□□□□ -0.51
VMP1-209ENST00000588915 F13BP05160 661 aa11.84□□□□□ -0.51
VMP1-209ENST00000588915 THRBP10828 461 aa11.84□□□□□ -0.51
VMP1-209ENST00000588915 CPT2P23786 658 aa11.84□□□□□ -0.51
VMP1-209ENST00000588915 PRTN3P24158 256 aa11.84□□□□□ -0.51
VMP1-209ENST00000588915 GUCA1AP43080 201 aaPredicted RBP11.84□□□□□ -0.51
VMP1-209ENST00000588915 PCBD1P61457 104 aa11.84□□□□□ -0.51
VMP1-209ENST00000588915 PSG4Q00888 419 aa11.84□□□□□ -0.51
VMP1-209ENST00000588915 ARL9Q6T311 187 aa11.84□□□□□ -0.51
VMP1-209ENST00000588915 GTF3AQ92664 365 aaKnown RBP11.84□□□□□ -0.51
VMP1-209ENST00000588915 TAMM41Q96BW9 452 aa11.84□□□□□ -0.51
VMP1-209ENST00000588915 SGTBQ96EQ0 304 aa11.84□□□□□ -0.51
VMP1-209ENST00000588915 WACQ9BTA9 647 aa11.84□□□□□ -0.51
VMP1-209ENST00000588915 ALG12Q9BV10 488 aa11.84□□□□□ -0.51
VMP1-209ENST00000588915 OR2J1Q9GZK6 312 aa11.84□□□□□ -0.51
VMP1-209ENST00000588915 TXNIPQ9H3M7 391 aa11.84□□□□□ -0.51
VMP1-209ENST00000588915 UGT2A1Q9Y4X1 527 aa11.84□□□□□ -0.51
VMP1-209ENST00000588915 TIMM10BQ9Y5J6 103 aa11.84□□□□□ -0.51
VMP1-209ENST00000588915 ISPDA4D126 451 aa11.83□□□□□ -0.52
VMP1-209ENST00000588915 ZSCAN5BA6NJL1 495 aa11.83□□□□□ -0.52
VMP1-209ENST00000588915 OR5F1O95221 314 aa11.83□□□□□ -0.52
VMP1-209ENST00000588915 CST2P09228 141 aa11.83□□□□□ -0.52
VMP1-209ENST00000588915 MPV17P39210 176 aa11.83□□□□□ -0.52
VMP1-209ENST00000588915 AQP2P41181 271 aa11.83□□□□□ -0.52
VMP1-209ENST00000588915 ARHGDIAP52565 204 aa11.83□□□□□ -0.52
VMP1-209ENST00000588915 MTPNP58546 118 aa11.83□□□□□ -0.52
VMP1-209ENST00000588915 PPP1CBP62140 327 aa11.83□□□□□ -0.52
VMP1-209ENST00000588915 LCN2P80188 198 aa11.83□□□□□ -0.52
VMP1-209ENST00000588915 GLO1Q04760 184 aa11.83□□□□□ -0.52
VMP1-209ENST00000588915 CDK5R2Q13319 367 aa11.83□□□□□ -0.52
VMP1-209ENST00000588915 SGCAQ16586 387 aa11.83□□□□□ -0.52
VMP1-209ENST00000588915 TMEM155Q4W5P6 130 aa11.83□□□□□ -0.52
VMP1-209ENST00000588915 AGBL2Q5U5Z8 902 aa11.83□□□□□ -0.52
VMP1-209ENST00000588915 SLC25A47Q6Q0C1 308 aa11.83□□□□□ -0.52
VMP1-209ENST00000588915 SYT9Q86SS6 491 aa11.83□□□□□ -0.52
VMP1-209ENST00000588915 SPICQ8N5J4 248 aa11.83□□□□□ -0.52
VMP1-209ENST00000588915 DEFB108BQ8NET1 73 aa11.83□□□□□ -0.52
VMP1-209ENST00000588915 LRRC58Q96CX6 371 aa11.83□□□□□ -0.52
VMP1-209ENST00000588915 SAMD8Q96LT4 415 aa11.83□□□□□ -0.52
VMP1-209ENST00000588915 RBP7Q96R05 134 aa11.83□□□□□ -0.52
VMP1-209ENST00000588915 PLEK2Q9NYT0 353 aa11.83□□□□□ -0.52
VMP1-209ENST00000588915 UBAP1Q9NZ09 502 aa11.83□□□□□ -0.52
VMP1-209ENST00000588915 PURGQ9UJV8 347 aaKnown RBP11.83□□□□□ -0.52
VMP1-209ENST00000588915 NUP50Q9UKX7 468 aa11.83□□□□□ -0.52
VMP1-209ENST00000588915 BAG5Q9UL15 447 aa11.83□□□□□ -0.52
VMP1-209ENST00000588915 PCDHGB1Q9Y5G3 927 aa11.83□□□□□ -0.52
VMP1-209ENST00000588915 ARHGAP32A7KAX9 2087 aa11.82□□□□□ -0.52
VMP1-209ENST00000588915 POM121CA8CG34 1229 aa11.82□□□□□ -0.52
VMP1-209ENST00000588915 SLC2A10O95528 541 aa11.82□□□□□ -0.52
VMP1-209ENST00000588915 IGHV2-70P01814 119 aa11.82□□□□□ -0.52
VMP1-209ENST00000588915 COX5BP10606 129 aa11.82□□□□□ -0.52
VMP1-209ENST00000588915 TNFRSF1AP19438 455 aa11.82□□□□□ -0.52
VMP1-209ENST00000588915 CDAP32320 146 aa11.82□□□□□ -0.52
VMP1-209ENST00000588915 CD47Q08722 323 aa11.82□□□□□ -0.52
VMP1-209ENST00000588915 SELPLGQ14242 412 aa11.82□□□□□ -0.52
VMP1-209ENST00000588915 VMACQ2NL98 169 aa11.82□□□□□ -0.52
VMP1-209ENST00000588915 MTX3Q5HYI7 312 aa11.82□□□□□ -0.52
VMP1-209ENST00000588915 TMEM255AQ5JRV8 349 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms