RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 SMAP2Q8WU79 429 aaPredicted RBP17.52■□□□□ 0.4
DDX39A-207ENST00000588542 BDH2Q9BUT1 245 aa17.52■□□□□ 0.4
DDX39A-207ENST00000588542 RERGLQ9H628 205 aa17.52■□□□□ 0.4
DDX39A-207ENST00000588542 POU2F3Q9UKI9 436 aa17.52■□□□□ 0.4
DDX39A-207ENST00000588542 COA3Q9Y2R0 106 aaPredicted RBP17.52■□□□□ 0.4
DDX39A-207ENST00000588542 ATP23Q9Y6H3 246 aa17.52■□□□□ 0.4
DDX39A-207ENST00000588542 PRRC2AP48634 2157 aaKnown RBP17.52■□□□□ 0.39
DDX39A-207ENST00000588542 H3BNX3 289 aa17.51■□□□□ 0.39
DDX39A-207ENST00000588542 RENP00797 406 aa17.51■□□□□ 0.39
DDX39A-207ENST00000588542 SERPINA5P05154 406 aa17.51■□□□□ 0.39
DDX39A-207ENST00000588542 SOD3P08294 240 aa17.51■□□□□ 0.39
DDX39A-207ENST00000588542 CST2P09228 141 aa17.51■□□□□ 0.39
DDX39A-207ENST00000588542 ZNF32P17041 273 aa17.51■□□□□ 0.39
DDX39A-207ENST00000588542 MSR1P21757 451 aa17.51■□□□□ 0.39
DDX39A-207ENST00000588542 DAPP51397 102 aa17.51■□□□□ 0.39
DDX39A-207ENST00000588542 ARHGDIAP52565 204 aa17.51■□□□□ 0.39
DDX39A-207ENST00000588542 HGFACQ04756 655 aa17.51■□□□□ 0.39
DDX39A-207ENST00000588542 TMEM53Q6P2H8 277 aa17.51■□□□□ 0.39
DDX39A-207ENST00000588542 OR6V1Q8N148 313 aa17.51■□□□□ 0.39
DDX39A-207ENST00000588542 ATG16L2Q8NAA4 619 aa17.51■□□□□ 0.39
DDX39A-207ENST00000588542 OR2T33Q8NG76 320 aa17.51■□□□□ 0.39
DDX39A-207ENST00000588542 RAB3IPQ96QF0 476 aaPredicted RBP17.51■□□□□ 0.39
DDX39A-207ENST00000588542 CCL19Q99731 98 aa17.51■□□□□ 0.39
DDX39A-207ENST00000588542 ZNF416Q9BWM5 594 aa17.51■□□□□ 0.39
DDX39A-207ENST00000588542 FN3KQ9H479 309 aa17.51■□□□□ 0.39
DDX39A-207ENST00000588542 RNF121Q9H920 327 aa17.51■□□□□ 0.39
DDX39A-207ENST00000588542 ZNF556Q9HAH1 456 aa17.51■□□□□ 0.39
DDX39A-207ENST00000588542 SRA1Q9HD15 236 aaKnown RBP17.51■□□□□ 0.39
DDX39A-207ENST00000588542 EMC7Q9NPA0 242 aa17.51■□□□□ 0.39
DDX39A-207ENST00000588542 B9D1Q9UPM9 204 aa17.51■□□□□ 0.39
DDX39A-207ENST00000588542 BAIAP2Q9UQB8 552 aa17.51■□□□□ 0.39
DDX39A-207ENST00000588542 CELSR1Q9NYQ6 3014 aa17.5■□□□□ 0.39
DDX39A-207ENST00000588542 MPZL1O95297 269 aa17.5■□□□□ 0.39
DDX39A-207ENST00000588542 GPANK1O95872 356 aa17.5■□□□□ 0.39
DDX39A-207ENST00000588542 CD8AP01732 235 aa17.5■□□□□ 0.39
DDX39A-207ENST00000588542 ZNF35P13682 527 aa17.5■□□□□ 0.39
DDX39A-207ENST00000588542 OSMP13725 252 aa17.5■□□□□ 0.39
DDX39A-207ENST00000588542 CRABP1P29762 137 aa17.5■□□□□ 0.39
DDX39A-207ENST00000588542 GUCA1AP43080 201 aaPredicted RBP17.5■□□□□ 0.39
DDX39A-207ENST00000588542 DEFB113Q30KQ7 82 aa17.5■□□□□ 0.39
DDX39A-207ENST00000588542 ZBTB46Q86UZ6 589 aa17.5■□□□□ 0.39
DDX39A-207ENST00000588542 HIPK1Q86Z02 1210 aa17.5■□□□□ 0.39
DDX39A-207ENST00000588542 GLB1L2Q8IW92 636 aa17.5■□□□□ 0.39
DDX39A-207ENST00000588542 IQCF1Q8N6M8 205 aa17.5■□□□□ 0.39
DDX39A-207ENST00000588542 IL17RDQ8NFM7 739 aa17.5■□□□□ 0.39
DDX39A-207ENST00000588542 TEX47Q8TBZ9 253 aa17.5■□□□□ 0.39
DDX39A-207ENST00000588542 DHRS9Q9BPW9 319 aa17.5■□□□□ 0.39
DDX39A-207ENST00000588542 KCNS3Q9BQ31 491 aa17.5■□□□□ 0.39
DDX39A-207ENST00000588542 KCNN2Q9H2S1 579 aa17.5■□□□□ 0.39
DDX39A-207ENST00000588542 RPRD1BQ9NQG5 326 aaKnown RBP17.5■□□□□ 0.39
DDX39A-207ENST00000588542 ITGB1BP2Q9UKP3 347 aa17.5■□□□□ 0.39
DDX39A-207ENST00000588542 FBXL3Q9UKT7 428 aa17.5■□□□□ 0.39
DDX39A-207ENST00000588542 ARID1AO14497 2285 aa17.5■□□□□ 0.39
DDX39A-207ENST00000588542 G3V2T6 193 aa17.49■□□□□ 0.39
DDX39A-207ENST00000588542 H3BN98 237 aa17.49■□□□□ 0.39
DDX39A-207ENST00000588542 GAAP10253 952 aa17.49■□□□□ 0.39
DDX39A-207ENST00000588542 TESK1Q15569 626 aa17.49■□□□□ 0.39
DDX39A-207ENST00000588542 PABPC1L2AQ5JQF8 200 aa17.49■□□□□ 0.39
DDX39A-207ENST00000588542 OTPQ5XKR4 325 aa17.49■□□□□ 0.39
DDX39A-207ENST00000588542 DNM1P34Q6PK57 102 aa17.49■□□□□ 0.39
DDX39A-207ENST00000588542 DTX2Q86UW9 622 aa17.49■□□□□ 0.39
DDX39A-207ENST00000588542 CYB561A3Q8NBI2 242 aa17.49■□□□□ 0.39
DDX39A-207ENST00000588542 SLC37A3Q8NCC5 494 aa17.49■□□□□ 0.39
DDX39A-207ENST00000588542 CPEB3Q8NE35 698 aaKnown RBP17.49■□□□□ 0.39
DDX39A-207ENST00000588542 PIGTQ969N2 578 aa17.49■□□□□ 0.39
DDX39A-207ENST00000588542 CENPNQ96H22 339 aaPredicted RBP17.49■□□□□ 0.39
DDX39A-207ENST00000588542 RACGAP1Q9H0H5 632 aa17.49■□□□□ 0.39
DDX39A-207ENST00000588542 GABARAPL1Q9H0R8 117 aa17.49■□□□□ 0.39
DDX39A-207ENST00000588542 SEMA6AQ9H2E6 1030 aa17.49■□□□□ 0.39
DDX39A-207ENST00000588542 CCNB1IP1Q9NPC3 277 aa17.49■□□□□ 0.39
DDX39A-207ENST00000588542 LAMP3Q9UQV4 416 aa17.49■□□□□ 0.39
DDX39A-207ENST00000588542 FKBP7Q9Y680 259 aa17.49■□□□□ 0.39
DDX39A-207ENST00000588542 ARFGEF3Q5TH69 2177 aa17.49■□□□□ 0.39
DDX39A-207ENST00000588542 USF3Q68DE3 2245 aa17.48■□□□□ 0.39
DDX39A-207ENST00000588542 ZNF23P17027 643 aa17.48■□□□□ 0.39
DDX39A-207ENST00000588542 POU1F1P28069 291 aa17.48■□□□□ 0.39
DDX39A-207ENST00000588542 TTKP33981 857 aa17.48■□□□□ 0.39
DDX39A-207ENST00000588542 GRK5P34947 590 aa17.48■□□□□ 0.39
DDX39A-207ENST00000588542 PSG4Q00888 419 aa17.48■□□□□ 0.39
DDX39A-207ENST00000588542 GABPB1Q06547 395 aaPredicted RBP17.48■□□□□ 0.39
DDX39A-207ENST00000588542 KCNMB1Q16558 191 aa17.48■□□□□ 0.39
DDX39A-207ENST00000588542 ACSM5Q6NUN0 579 aa17.48■□□□□ 0.39
DDX39A-207ENST00000588542 ZFP1Q6P2D0 407 aa17.48■□□□□ 0.39
DDX39A-207ENST00000588542 SYT9Q86SS6 491 aa17.48■□□□□ 0.39
DDX39A-207ENST00000588542 OR4F15Q8NGB8 312 aa17.48■□□□□ 0.39
DDX39A-207ENST00000588542 DNAJC9Q8WXX5 260 aa17.48■□□□□ 0.39
DDX39A-207ENST00000588542 C11orf40Q8WZ69 217 aa17.48■□□□□ 0.39
DDX39A-207ENST00000588542 FOXC2Q99958 501 aa17.48■□□□□ 0.39
DDX39A-207ENST00000588542 PKP2Q99959 881 aa17.48■□□□□ 0.39
DDX39A-207ENST00000588542 TRAF4Q9BUZ4 470 aaPredicted RBP17.48■□□□□ 0.39
DDX39A-207ENST00000588542 RBM4Q9BWF3 364 aaKnown RBP17.48■□□□□ 0.39
DDX39A-207ENST00000588542 WNT5BQ9H1J7 359 aa17.48■□□□□ 0.39
DDX39A-207ENST00000588542 CXXC4Q9H2H0 198 aa17.48■□□□□ 0.39
DDX39A-207ENST00000588542 BEX4Q9NWD9 120 aaPredicted RBP17.48■□□□□ 0.39
DDX39A-207ENST00000588542 KIF17Q9P2E2 1029 aa17.48■□□□□ 0.39
DDX39A-207ENST00000588542 KLHL21Q9UJP4 597 aa17.48■□□□□ 0.39
DDX39A-207ENST00000588542 C12orf71A8MTZ7 269 aa17.47■□□□□ 0.39
DDX39A-207ENST00000588542 OVOL3O00110 214 aa17.47■□□□□ 0.39
DDX39A-207ENST00000588542 APEX1P27695 318 aaKnown RBP17.47■□□□□ 0.39
DDX39A-207ENST00000588542 FABP6P51161 128 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms