RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 BPESC1Q9GZL8 116 aa16.81■□□□□ 0.28
TPM4-208ENST00000588410 EIF3KQ9UBQ5 218 aaKnown RBP16.81■□□□□ 0.28
TPM4-208ENST00000588410 CD300AQ9UGN4 299 aa16.81■□□□□ 0.28
TPM4-208ENST00000588410 ADAM21Q9UKJ8 722 aa16.81■□□□□ 0.28
TPM4-208ENST00000588410 ADAM18Q9Y3Q7 739 aa16.81■□□□□ 0.28
TPM4-208ENST00000588410 UNC119BA6NIH7 251 aa16.8■□□□□ 0.28
TPM4-208ENST00000588410 ARPC2O15144 300 aa16.8■□□□□ 0.28
TPM4-208ENST00000588410 GADD45GO95257 159 aa16.8■□□□□ 0.28
TPM4-208ENST00000588410 CST2P09228 141 aa16.8■□□□□ 0.28
TPM4-208ENST00000588410 APEHP13798 732 aaKnown RBP16.8■□□□□ 0.28
TPM4-208ENST00000588410 MSR1P21757 451 aa16.8■□□□□ 0.28
TPM4-208ENST00000588410 GZMKP49863 264 aa16.8■□□□□ 0.28
TPM4-208ENST00000588410 GDI2P50395 445 aaKnown RBP16.8■□□□□ 0.28
TPM4-208ENST00000588410 SPIBQ01892 262 aa16.8■□□□□ 0.28
TPM4-208ENST00000588410 MAD2L1BPQ15013 274 aaPredicted RBP16.8■□□□□ 0.28
TPM4-208ENST00000588410 SPATS1Q496A3 300 aa16.8■□□□□ 0.28
TPM4-208ENST00000588410 C6orf52Q5T4I8 152 aa16.8■□□□□ 0.28
TPM4-208ENST00000588410 UNQ6126/PRO20091Q6UXV3 157 aa16.8■□□□□ 0.28
TPM4-208ENST00000588410 ZNF786Q8N393 782 aa16.8■□□□□ 0.28
TPM4-208ENST00000588410 CPEB3Q8NE35 698 aaKnown RBP16.8■□□□□ 0.28
TPM4-208ENST00000588410 AKR7LQ8NHP1 331 aa16.8■□□□□ 0.28
TPM4-208ENST00000588410 SYNPRQ8TBG9 265 aa16.8■□□□□ 0.28
TPM4-208ENST00000588410 TIMM10BQ9Y5J6 103 aa16.8■□□□□ 0.28
TPM4-208ENST00000588410 FN1P02751 2386 aaKnown RBP16.8■□□□□ 0.28
TPM4-208ENST00000588410 ALPK2Q86TB3 2170 aa16.79■□□□□ 0.28
TPM4-208ENST00000588410 HEATR1Q9H583 2144 aaKnown RBP16.79■□□□□ 0.28
TPM4-208ENST00000588410 C12orf71A8MTZ7 269 aa16.79■□□□□ 0.28
TPM4-208ENST00000588410 AHCYL1O43865 530 aa16.79■□□□□ 0.28
TPM4-208ENST00000588410 PTP4A3O75365 173 aa16.79■□□□□ 0.28
TPM4-208ENST00000588410 FABP3P05413 133 aa16.79■□□□□ 0.28
TPM4-208ENST00000588410 IGFBP1P08833 259 aaPredicted RBP16.79■□□□□ 0.28
TPM4-208ENST00000588410 IGHV4-31P0DP07 118 aa16.79■□□□□ 0.28
TPM4-208ENST00000588410 ZNF26P17031 533 aaPredicted RBP16.79■□□□□ 0.28
TPM4-208ENST00000588410 OMPP47874 163 aa16.79■□□□□ 0.28
TPM4-208ENST00000588410 LIMS1P48059 325 aa16.79■□□□□ 0.28
TPM4-208ENST00000588410 KLF3P57682 345 aaPredicted RBP16.79■□□□□ 0.28
TPM4-208ENST00000588410 PSG4Q00888 419 aa16.79■□□□□ 0.28
TPM4-208ENST00000588410 SEC23BQ15437 767 aa16.79■□□□□ 0.28
TPM4-208ENST00000588410 GPR139Q6DWJ6 353 aa16.79■□□□□ 0.28
TPM4-208ENST00000588410 FOXL2NBQ6ZUU3 175 aa16.79■□□□□ 0.28
TPM4-208ENST00000588410 SNX33Q8WV41 574 aa16.79■□□□□ 0.28
TPM4-208ENST00000588410 DHRS1Q96LJ7 313 aa16.79■□□□□ 0.28
TPM4-208ENST00000588410 CCT8L2Q96SF2 557 aa16.79■□□□□ 0.28
TPM4-208ENST00000588410 OR2H1Q9GZK4 316 aa16.79■□□□□ 0.28
TPM4-208ENST00000588410 SLCO1C1Q9NYB5 712 aa16.79■□□□□ 0.28
TPM4-208ENST00000588410 TAAR3PQ9P1P4 343 aa16.79■□□□□ 0.28
TPM4-208ENST00000588410 MYEF2Q9P2K5 600 aaKnown RBP16.79■□□□□ 0.28
TPM4-208ENST00000588410 SIGLEC7Q9Y286 467 aa16.79■□□□□ 0.28
TPM4-208ENST00000588410 NAV3Q8IVL0 2385 aa16.79■□□□□ 0.28
TPM4-208ENST00000588410 NSD1Q96L73 2696 aaPredicted RBP16.78■□□□□ 0.28
TPM4-208ENST00000588410 IGHV4-61A0A0C4DH41 118 aa16.78■□□□□ 0.28
TPM4-208ENST00000588410 TEX13CA0A0J9YWL9 993 aa16.78■□□□□ 0.28
TPM4-208ENST00000588410 PRSS37A4D1T9 235 aa16.78■□□□□ 0.28
TPM4-208ENST00000588410 C5orf49A4QMS7 147 aa16.78■□□□□ 0.28
TPM4-208ENST00000588410 ZNF16P17020 682 aaPredicted RBP16.78■□□□□ 0.28
TPM4-208ENST00000588410 GIFP27352 417 aa16.78■□□□□ 0.28
TPM4-208ENST00000588410 KRR1Q13601 381 aaKnown RBP16.78■□□□□ 0.28
TPM4-208ENST00000588410 MOGQ16653 247 aa16.78■□□□□ 0.28
TPM4-208ENST00000588410 ALKBH6Q3KRA9 238 aa16.78■□□□□ 0.28
TPM4-208ENST00000588410 MESTQ5EB52 335 aa16.78■□□□□ 0.28
TPM4-208ENST00000588410 PRIMA1Q86XR5 153 aa16.78■□□□□ 0.28
TPM4-208ENST00000588410 OR1J1Q8NGS3 322 aa16.78■□□□□ 0.28
TPM4-208ENST00000588410 RERGLQ9H628 205 aa16.78■□□□□ 0.28
TPM4-208ENST00000588410 POLE4Q9NR33 117 aa16.78■□□□□ 0.28
TPM4-208ENST00000588410 IL20RAQ9UHF4 553 aa16.78■□□□□ 0.28
TPM4-208ENST00000588410 TMCC3Q9ULS5 477 aa16.78■□□□□ 0.28
TPM4-208ENST00000588410 CLPTM1O96005 669 aa16.77■□□□□ 0.28
TPM4-208ENST00000588410 MT-ND5P03915 603 aa16.77■□□□□ 0.28
TPM4-208ENST00000588410 SEMG1P04279 462 aa16.77■□□□□ 0.28
TPM4-208ENST00000588410 NAT2P11245 290 aa16.77■□□□□ 0.28
TPM4-208ENST00000588410 ZNF250P15622 560 aa16.77■□□□□ 0.28
TPM4-208ENST00000588410 ZNF23P17027 643 aa16.77■□□□□ 0.28
TPM4-208ENST00000588410 SDHAP31040 664 aa16.77■□□□□ 0.28
TPM4-208ENST00000588410 IFNGR2P38484 337 aa16.77■□□□□ 0.28
TPM4-208ENST00000588410 RPS6KA3P51812 740 aa16.77■□□□□ 0.28
TPM4-208ENST00000588410 ERVS71-1P61550 626 aa16.77■□□□□ 0.28
TPM4-208ENST00000588410 CHRFAM7AQ494W8 412 aa16.77■□□□□ 0.28
TPM4-208ENST00000588410 TMEM154Q6P9G4 183 aa16.77■□□□□ 0.28
TPM4-208ENST00000588410 SMARCD3Q6STE5 483 aa16.77■□□□□ 0.28
TPM4-208ENST00000588410 DPY19L2P2Q6ZN68 376 aa16.77■□□□□ 0.28
TPM4-208ENST00000588410 FAM122BQ7Z309 247 aa16.77■□□□□ 0.28
TPM4-208ENST00000588410 HIPK1Q86Z02 1210 aa16.77■□□□□ 0.28
TPM4-208ENST00000588410 RASD2Q96D21 266 aa16.77■□□□□ 0.28
TPM4-208ENST00000588410 NSL1Q96IY1 281 aa16.77■□□□□ 0.28
TPM4-208ENST00000588410 POM121L2Q96KW2 1035 aa16.77■□□□□ 0.28
TPM4-208ENST00000588410 GPX7Q96SL4 187 aaPredicted RBP16.77■□□□□ 0.28
TPM4-208ENST00000588410 ZNF416Q9BWM5 594 aa16.77■□□□□ 0.28
TPM4-208ENST00000588410 WNT5BQ9H1J7 359 aa16.77■□□□□ 0.28
TPM4-208ENST00000588410 NRIP3Q9NQ35 241 aa16.77■□□□□ 0.28
TPM4-208ENST00000588410 HINT3Q9NQE9 182 aaKnown RBP16.77■□□□□ 0.28
TPM4-208ENST00000588410 IER3IP1Q9Y5U9 82 aa16.77■□□□□ 0.28
TPM4-208ENST00000588410 B2RBV5 119 aa16.76■□□□□ 0.27
TPM4-208ENST00000588410 LYNX1G3V0Z9 82 aa16.76■□□□□ 0.27
TPM4-208ENST00000588410 SOCS2O14508 198 aa16.76■□□□□ 0.27
TPM4-208ENST00000588410 DYNC1I1O14576 645 aa16.76■□□□□ 0.27
TPM4-208ENST00000588410 OR10H3O60404 316 aa16.76■□□□□ 0.27
TPM4-208ENST00000588410 SLC16A7O60669 478 aa16.76■□□□□ 0.27
TPM4-208ENST00000588410 KHDRBS3O75525 346 aaKnown RBP16.76■□□□□ 0.27
TPM4-208ENST00000588410 LYNX1P0DP58 116 aa16.76■□□□□ 0.27
TPM4-208ENST00000588410 GCH1P30793 250 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms