RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 MNTQ99583 582 aa13.15□□□□□ -0.3
NFIX-208ENST00000587260 ULBP2Q9BZM5 246 aa13.15□□□□□ -0.3
NFIX-208ENST00000587260 YIPF3Q9GZM5 350 aa13.15□□□□□ -0.3
NFIX-208ENST00000587260 OPN3Q9H1Y3 402 aaPredicted RBP13.15□□□□□ -0.3
NFIX-208ENST00000587260 ACOT13Q9NPJ3 140 aa13.15□□□□□ -0.3
NFIX-208ENST00000587260 SLC7A10Q9NS82 523 aa13.15□□□□□ -0.3
NFIX-208ENST00000587260 MRPL22Q9NWU5 206 aaKnown RBP13.15□□□□□ -0.3
NFIX-208ENST00000587260 A0A1B0GUH1 482 aa13.14□□□□□ -0.31
NFIX-208ENST00000587260 EEF1E1-BLOC1S5C9J1V9 151 aa13.14□□□□□ -0.31
NFIX-208ENST00000587260 RPL36A-HNRNPH2H7BZ11 118 aa13.14□□□□□ -0.31
NFIX-208ENST00000587260 DHHO43323 396 aa13.14□□□□□ -0.31
NFIX-208ENST00000587260 EEF1E1O43324 174 aaKnown RBP13.14□□□□□ -0.31
NFIX-208ENST00000587260 APOL3O95236 402 aa13.14□□□□□ -0.31
NFIX-208ENST00000587260 TFP02787 698 aa13.14□□□□□ -0.31
NFIX-208ENST00000587260 LIMS3P0CW19 117 aa13.14□□□□□ -0.31
NFIX-208ENST00000587260 LIMS4P0CW20 117 aa13.14□□□□□ -0.31
NFIX-208ENST00000587260 RPL5P46777 297 aaKnown RBP13.14□□□□□ -0.31
NFIX-208ENST00000587260 ADORA2A-AS1P86434 159 aa13.14□□□□□ -0.31
NFIX-208ENST00000587260 C9orf135Q5VTT2 229 aa13.14□□□□□ -0.31
NFIX-208ENST00000587260 KCTD8Q6ZWB6 473 aa13.14□□□□□ -0.31
NFIX-208ENST00000587260 LINGO2Q7L985 606 aa13.14□□□□□ -0.31
NFIX-208ENST00000587260 SHFQ7M4L6 423 aa13.14□□□□□ -0.31
NFIX-208ENST00000587260 EGFL6Q8IUX8 553 aa13.14□□□□□ -0.31
NFIX-208ENST00000587260 NANOGP1Q8N7R0 232 aa13.14□□□□□ -0.31
NFIX-208ENST00000587260 NSMAFQ92636 917 aa13.14□□□□□ -0.31
NFIX-208ENST00000587260 FOXN4Q96NZ1 517 aa13.14□□□□□ -0.31
NFIX-208ENST00000587260 INTS14Q96SY0 518 aa13.14□□□□□ -0.31
NFIX-208ENST00000587260 B3GAT2Q9NPZ5 323 aa13.14□□□□□ -0.31
NFIX-208ENST00000587260 ERVK13-1Q9NX77 482 aa13.14□□□□□ -0.31
NFIX-208ENST00000587260 UPB1Q9UBR1 384 aa13.14□□□□□ -0.31
NFIX-208ENST00000587260 ERGIC3Q9Y282 383 aa13.14□□□□□ -0.31
NFIX-208ENST00000587260 UGT2A1Q9Y4X1 527 aa13.14□□□□□ -0.31
NFIX-208ENST00000587260 ZNF462Q96JM2 2506 aa13.14□□□□□ -0.31
NFIX-208ENST00000587260 TMEM129A0AVI4 362 aa13.13□□□□□ -0.31
NFIX-208ENST00000587260 C12orf71A8MTZ7 269 aa13.13□□□□□ -0.31
NFIX-208ENST00000587260 SELENOFO60613 162 aa13.13□□□□□ -0.31
NFIX-208ENST00000587260 MRPL3P09001 348 aaKnown RBP13.13□□□□□ -0.31
NFIX-208ENST00000587260 MYL12AP19105 171 aa13.13□□□□□ -0.31
NFIX-208ENST00000587260 OPRM1P35372 400 aa13.13□□□□□ -0.31
NFIX-208ENST00000587260 ALDH3B2P48448 385 aa13.13□□□□□ -0.31
NFIX-208ENST00000587260 ETV1P50549 477 aa13.13□□□□□ -0.31
NFIX-208ENST00000587260 FAPQ12884 760 aa13.13□□□□□ -0.31
NFIX-208ENST00000587260 C4orf17Q53FE4 359 aa13.13□□□□□ -0.31
NFIX-208ENST00000587260 UBE2UQ5VVX9 321 aa13.13□□□□□ -0.31
NFIX-208ENST00000587260 LYPD4Q6UWN0 246 aa13.13□□□□□ -0.31
NFIX-208ENST00000587260 LUZP2Q86TE4 346 aa13.13□□□□□ -0.31
NFIX-208ENST00000587260 CDC20BQ86Y33 519 aa13.13□□□□□ -0.31
NFIX-208ENST00000587260 LIX1LQ8IVB5 337 aa13.13□□□□□ -0.31
NFIX-208ENST00000587260 SLC35F2Q8IXU6 374 aa13.13□□□□□ -0.31
NFIX-208ENST00000587260 RELL2Q8NC24 303 aaPredicted RBP13.13□□□□□ -0.31
NFIX-208ENST00000587260 FCGR1BQ92637 280 aa13.13□□□□□ -0.31
NFIX-208ENST00000587260 WDR76Q9H967 626 aa13.13□□□□□ -0.31
NFIX-208ENST00000587260 VCX3AQ9NNX9 186 aa13.13□□□□□ -0.31
NFIX-208ENST00000587260 CHCHD3Q9NX63 227 aaKnown RBP13.13□□□□□ -0.31
NFIX-208ENST00000587260 CLEC2DQ9UHP7 191 aa13.13□□□□□ -0.31
NFIX-208ENST00000587260 MYO7BQ6PIF6 2116 aa13.13□□□□□ -0.31
NFIX-208ENST00000587260 TVP23AA6NH52 213 aa13.13□□□□□ -0.31
NFIX-208ENST00000587260 ZNF587BE7ETH6 402 aa13.13□□□□□ -0.31
NFIX-208ENST00000587260 DVL2O14641 736 aa13.13□□□□□ -0.31
NFIX-208ENST00000587260 SEC14L2O76054 403 aa13.13□□□□□ -0.31
NFIX-208ENST00000587260 GPANK1O95872 356 aa13.13□□□□□ -0.31
NFIX-208ENST00000587260 CGAP01215 116 aa13.13□□□□□ -0.31
NFIX-208ENST00000587260 NAA10P41227 235 aaPredicted RBP13.13□□□□□ -0.31
NFIX-208ENST00000587260 MAP2K4P45985 399 aa13.13□□□□□ -0.31
NFIX-208ENST00000587260 ENTPD1P49961 510 aa13.13□□□□□ -0.31
NFIX-208ENST00000587260 MRPS34P82930 218 aaKnown RBP13.13□□□□□ -0.31
NFIX-208ENST00000587260 ROR2Q01974 943 aaKnown RBP13.13□□□□□ -0.31
NFIX-208ENST00000587260 GALEQ14376 348 aa13.13□□□□□ -0.31
NFIX-208ENST00000587260 NRN1LQ496H8 165 aa13.13□□□□□ -0.31
NFIX-208ENST00000587260 ERI1Q8IV48 349 aaKnown RBP13.13□□□□□ -0.31
NFIX-208ENST00000587260 ZNF610Q8N9Z0 462 aa13.13□□□□□ -0.31
NFIX-208ENST00000587260 ZNF485Q8NCK3 441 aa13.13□□□□□ -0.31
NFIX-208ENST00000587260 OR10H4Q8NGA5 316 aa13.13□□□□□ -0.31
NFIX-208ENST00000587260 OTOSQ8NHW6 89 aa13.13□□□□□ -0.31
NFIX-208ENST00000587260 HTRA1Q92743 480 aa13.13□□□□□ -0.31
NFIX-208ENST00000587260 ZNF837Q96EG3 531 aaPredicted RBP13.13□□□□□ -0.31
NFIX-208ENST00000587260 MND1Q9BWT6 205 aa13.13□□□□□ -0.31
NFIX-208ENST00000587260 CRLF2Q9HC73 371 aa13.13□□□□□ -0.31
NFIX-208ENST00000587260 GPR35Q9HC97 309 aa13.13□□□□□ -0.31
NFIX-208ENST00000587260 KCNG2Q9UJ96 466 aa13.13□□□□□ -0.31
NFIX-208ENST00000587260 LSM2Q9Y333 95 aaKnown RBP13.13□□□□□ -0.31
NFIX-208ENST00000587260 TMEM14AQ9Y6G1 99 aa13.13□□□□□ -0.31
NFIX-208ENST00000587260 NCOA6Q14686 2063 aaPredicted RBP13.13□□□□□ -0.31
NFIX-208ENST00000587260 A0A1W2PPL8 197 aa13.12□□□□□ -0.31
NFIX-208ENST00000587260 A0A1W2PQL4 384 aaPredicted RBP13.12□□□□□ -0.31
NFIX-208ENST00000587260 DAPL1A0PJW8 107 aa13.12□□□□□ -0.31
NFIX-208ENST00000587260 ZNF593O00488 134 aaPredicted RBP13.12□□□□□ -0.31
NFIX-208ENST00000587260 CNOT4O95628 575 aaKnown RBP13.12□□□□□ -0.31
NFIX-208ENST00000587260 HLA-DQA2P01906 255 aa13.12□□□□□ -0.31
NFIX-208ENST00000587260 CD8BP10966 210 aa13.12□□□□□ -0.31
NFIX-208ENST00000587260 ALOX5APP20292 161 aa13.12□□□□□ -0.31
NFIX-208ENST00000587260 ZNF84P51523 738 aa13.12□□□□□ -0.31
NFIX-208ENST00000587260 FOXG1P55316 489 aaPredicted RBP13.12□□□□□ -0.31
NFIX-208ENST00000587260 LSM6P62312 80 aaKnown RBP13.12□□□□□ -0.31
NFIX-208ENST00000587260 ZNF85Q03923 595 aa13.12□□□□□ -0.31
NFIX-208ENST00000587260 CEACAM16Q2WEN9 425 aa13.12□□□□□ -0.31
NFIX-208ENST00000587260 SYT6Q5T7P8 510 aaPredicted RBP13.12□□□□□ -0.31
NFIX-208ENST00000587260 FBXW9Q5XUX1 488 aa13.12□□□□□ -0.31
NFIX-208ENST00000587260 ZNF627Q7L945 461 aa13.12□□□□□ -0.31
NFIX-208ENST00000587260 LHFPL3Q86UP9 236 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms