RNA–Protein interactions for RNA: ENST00000586441.1

ERCC2-207, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 682 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-207ENST00000586441 LILRB1Q8NHL6 650 aaPredicted RBP10.86□□□□□ -0.67
ERCC2-207ENST00000586441 RNF217Q8TC41 542 aa10.86□□□□□ -0.67
ERCC2-207ENST00000586441 TMEM171Q8WVE6 324 aa10.86□□□□□ -0.67
ERCC2-207ENST00000586441 AKAP1Q92667 903 aaKnown RBP eCLIP10.86□□□□□ -0.67
ERCC2-207ENST00000586441 FBXW5Q969U6 566 aa10.86□□□□□ -0.67
ERCC2-207ENST00000586441 OXGR1Q96P68 337 aa10.86□□□□□ -0.67
ERCC2-207ENST00000586441 DCUN1D5Q9BTE7 237 aa10.86□□□□□ -0.67
ERCC2-207ENST00000586441 TMEM43Q9BTV4 400 aa10.86□□□□□ -0.67
ERCC2-207ENST00000586441 PTDSS2Q9BVG9 487 aa10.86□□□□□ -0.67
ERCC2-207ENST00000586441 LINC00470Q9BZP3 86 aa10.86□□□□□ -0.67
ERCC2-207ENST00000586441 SLCO5A1Q9H2Y9 848 aa10.86□□□□□ -0.67
ERCC2-207ENST00000586441 EGLN3Q9H6Z9 239 aa10.86□□□□□ -0.67
ERCC2-207ENST00000586441 SLC7A10Q9NS82 523 aa10.86□□□□□ -0.67
ERCC2-207ENST00000586441 MRPS18AQ9NVS2 196 aaKnown RBP10.86□□□□□ -0.67
ERCC2-207ENST00000586441 DNAJC27Q9NZQ0 273 aa10.86□□□□□ -0.67
ERCC2-207ENST00000586441 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.86□□□□□ -0.67
ERCC2-207ENST00000586441 BAIAP2Q9UQB8 552 aa10.86□□□□□ -0.67
ERCC2-207ENST00000586441 RCE1Q9Y256 329 aa10.86□□□□□ -0.67
ERCC2-207ENST00000586441 ERGIC3Q9Y282 383 aa10.86□□□□□ -0.67
ERCC2-207ENST00000586441 AMDHD2Q9Y303 409 aa10.86□□□□□ -0.67
ERCC2-207ENST00000586441 CORINQ9Y5Q5 1042 aa10.86□□□□□ -0.67
ERCC2-207ENST00000586441 SLC25A15Q9Y619 301 aa10.86□□□□□ -0.67
ERCC2-207ENST00000586441 PLCE1Q9P212 2302 aa10.86□□□□□ -0.67
ERCC2-207ENST00000586441 FLNAP21333 2647 aaKnown RBP10.86□□□□□ -0.67
ERCC2-207ENST00000586441 TRAV36DV7A0A075B6V5 113 aa10.85□□□□□ -0.67
ERCC2-207ENST00000586441 FAM171A2A8MVW0 826 aa10.85□□□□□ -0.67
ERCC2-207ENST00000586441 M0R129 80 aa10.85□□□□□ -0.67
ERCC2-207ENST00000586441 OVOL3O00110 214 aa10.85□□□□□ -0.67
ERCC2-207ENST00000586441 PRODHO43272 600 aa10.85□□□□□ -0.67
ERCC2-207ENST00000586441 PRKYO43930 277 aa10.85□□□□□ -0.67
ERCC2-207ENST00000586441 RAB36O95755 333 aa10.85□□□□□ -0.67
ERCC2-207ENST00000586441 LCKP06239 509 aa10.85□□□□□ -0.67
ERCC2-207ENST00000586441 ITGA5P08648 1049 aa10.85□□□□□ -0.67
ERCC2-207ENST00000586441 DANCRP0C864 163 aa10.85□□□□□ -0.67
ERCC2-207ENST00000586441 ADORA3P0DMS8 318 aa10.85□□□□□ -0.67
ERCC2-207ENST00000586441 IFI30P13284 250 aa10.85□□□□□ -0.67
ERCC2-207ENST00000586441 GRK5P34947 590 aa10.85□□□□□ -0.67
ERCC2-207ENST00000586441 GPR4P46093 362 aa10.85□□□□□ -0.67
ERCC2-207ENST00000586441 SERPINB10P48595 397 aa10.85□□□□□ -0.67
ERCC2-207ENST00000586441 C1DQ13901 141 aaKnown RBP10.85□□□□□ -0.67
ERCC2-207ENST00000586441 ETFDHQ16134 617 aa10.85□□□□□ -0.67
ERCC2-207ENST00000586441 CTF1Q16619 201 aa10.85□□□□□ -0.67
ERCC2-207ENST00000586441 PGGHGQ32M88 737 aa10.85□□□□□ -0.67
ERCC2-207ENST00000586441 ZNF672Q499Z4 452 aaPredicted RBP10.85□□□□□ -0.67
ERCC2-207ENST00000586441 TSPO2Q5TGU0 170 aa10.85□□□□□ -0.67
ERCC2-207ENST00000586441 LINC00114Q6XXX2 140 aa10.85□□□□□ -0.67
ERCC2-207ENST00000586441 H1FNTQ75WM6 255 aaPredicted RBP10.85□□□□□ -0.67
ERCC2-207ENST00000586441 IQCF1Q8N6M8 205 aa10.85□□□□□ -0.67
ERCC2-207ENST00000586441 SCAIQ8N9R8 606 aa10.85□□□□□ -0.67
ERCC2-207ENST00000586441 LRR1Q96L50 414 aa10.85□□□□□ -0.67
ERCC2-207ENST00000586441 ZNF582Q96NG8 517 aaPredicted RBP10.85□□□□□ -0.67
ERCC2-207ENST00000586441 MND1Q9BWT6 205 aa10.85□□□□□ -0.67
ERCC2-207ENST00000586441 FAIMQ9NVQ4 179 aa10.85□□□□□ -0.67
ERCC2-207ENST00000586441 CHCHD3Q9NX63 227 aaKnown RBP10.85□□□□□ -0.67
ERCC2-207ENST00000586441 DIMT1Q9UNQ2 313 aaKnown RBP10.85□□□□□ -0.67
ERCC2-207ENST00000586441 SETD2Q9BYW2 2564 aaPredicted RBP10.85□□□□□ -0.67
ERCC2-207ENST00000586441 USF3Q68DE3 2245 aa10.85□□□□□ -0.67
ERCC2-207ENST00000586441 EFCAB9A8MZ26 197 aa10.84□□□□□ -0.67
ERCC2-207ENST00000586441 RPL36A-HNRNPH2H7BZ11 118 aa10.84□□□□□ -0.67
ERCC2-207ENST00000586441 SURF4O15260 269 aa10.84□□□□□ -0.67
ERCC2-207ENST00000586441 PIP5K1CO60331 668 aa10.84□□□□□ -0.67
ERCC2-207ENST00000586441 RAD51DO75771 328 aa10.84□□□□□ -0.67
ERCC2-207ENST00000586441 PLAUP00749 431 aa10.84□□□□□ -0.67
ERCC2-207ENST00000586441 IGHV3-9P01782 118 aa10.84□□□□□ -0.67
ERCC2-207ENST00000586441 ZNF43P17038 809 aa10.84□□□□□ -0.67
ERCC2-207ENST00000586441 GTF2E2P29084 291 aaKnown RBP10.84□□□□□ -0.67
ERCC2-207ENST00000586441 RPS5P46782 204 aaKnown RBP10.84□□□□□ -0.67
ERCC2-207ENST00000586441 PRPS1P60891 318 aa10.84□□□□□ -0.67
ERCC2-207ENST00000586441 LSM11P83369 360 aaKnown RBP eCLIP10.84□□□□□ -0.67
ERCC2-207ENST00000586441 BSPH1Q075Z2 132 aa10.84□□□□□ -0.67
ERCC2-207ENST00000586441 RAB40BQ12829 278 aa10.84□□□□□ -0.67
ERCC2-207ENST00000586441 STK11Q15831 433 aa10.84□□□□□ -0.67
ERCC2-207ENST00000586441 DGUOKQ16854 277 aa10.84□□□□□ -0.67
ERCC2-207ENST00000586441 C3orf36Q3SXR2 165 aa10.84□□□□□ -0.67
ERCC2-207ENST00000586441 ARMCX4Q5H9R4 360 aa10.84□□□□□ -0.67
ERCC2-207ENST00000586441 SLC46A3Q7Z3Q1 461 aa10.84□□□□□ -0.67
ERCC2-207ENST00000586441 BIVMQ86UB2 503 aa10.84□□□□□ -0.67
ERCC2-207ENST00000586441 GPAT4Q86UL3 456 aa10.84□□□□□ -0.67
ERCC2-207ENST00000586441 GID4Q8IVV7 300 aa10.84□□□□□ -0.67
ERCC2-207ENST00000586441 FAM169BQ8N8A8 192 aa10.84□□□□□ -0.67
ERCC2-207ENST00000586441 WFDC11Q8NEX6 87 aa10.84□□□□□ -0.67
ERCC2-207ENST00000586441 PROKR2Q8NFJ6 384 aa10.84□□□□□ -0.67
ERCC2-207ENST00000586441 OR8D4Q8NGM9 314 aa10.84□□□□□ -0.67
ERCC2-207ENST00000586441 FANK1Q8TC84 345 aa10.84□□□□□ -0.67
ERCC2-207ENST00000586441 SMAP2Q8WU79 429 aaPredicted RBP10.84□□□□□ -0.67
ERCC2-207ENST00000586441 BPIFA2Q96DR5 249 aa10.84□□□□□ -0.67
ERCC2-207ENST00000586441 KTI12Q96EK9 354 aaPredicted RBP10.84□□□□□ -0.67
ERCC2-207ENST00000586441 C18orf12Q96KH6 178 aa10.84□□□□□ -0.67
ERCC2-207ENST00000586441 ZNF385AQ96PM9 386 aaKnown RBP10.84□□□□□ -0.67
ERCC2-207ENST00000586441 ZNF426Q9BUY5 554 aa10.84□□□□□ -0.67
ERCC2-207ENST00000586441 PLA2G12AQ9BZM1 189 aa10.84□□□□□ -0.67
ERCC2-207ENST00000586441 SLC19A3Q9BZV2 496 aa10.84□□□□□ -0.67
ERCC2-207ENST00000586441 FN3KQ9H479 309 aa10.84□□□□□ -0.67
ERCC2-207ENST00000586441 FGF20Q9NP95 211 aaPredicted RBP10.84□□□□□ -0.67
ERCC2-207ENST00000586441 SLC17A5Q9NRA2 495 aa10.84□□□□□ -0.67
ERCC2-207ENST00000586441 H2AFY2Q9P0M6 372 aaPredicted RBP10.84□□□□□ -0.67
ERCC2-207ENST00000586441 EXOSC1Q9Y3B2 195 aaKnown RBP10.84□□□□□ -0.67
ERCC2-207ENST00000586441 ALPK2Q86TB3 2170 aa10.84□□□□□ -0.67
ERCC2-207ENST00000586441 IGKV1D-42A0A075B6H8 117 aa10.83□□□□□ -0.68
ERCC2-207ENST00000586441 SHISA9B4DS77 424 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms