RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 IQCMA0A1B0GVH7 501 aa12.12□□□□□ -0.47
TRAF4-215ENST00000584944 TMCC2O75069 709 aa12.12□□□□□ -0.47
TRAF4-215ENST00000584944 PTHP01270 115 aa12.12□□□□□ -0.47
TRAF4-215ENST00000584944 HLA-HP01893 362 aa12.12□□□□□ -0.47
TRAF4-215ENST00000584944 ALPLP05186 524 aa12.12□□□□□ -0.47
TRAF4-215ENST00000584944 CTLA4P16410 223 aa12.12□□□□□ -0.47
TRAF4-215ENST00000584944 ZNF823P16415 610 aa12.12□□□□□ -0.47
TRAF4-215ENST00000584944 PTAFRP25105 342 aa12.12□□□□□ -0.47
TRAF4-215ENST00000584944 BLVRAP53004 296 aa12.12□□□□□ -0.47
TRAF4-215ENST00000584944 CRMP1Q14194 572 aa12.12□□□□□ -0.47
TRAF4-215ENST00000584944 DAZAP2Q15038 168 aaPredicted RBP12.12□□□□□ -0.47
TRAF4-215ENST00000584944 KLHL12Q53G59 568 aa12.12□□□□□ -0.47
TRAF4-215ENST00000584944 TMEM236Q5W0B7 351 aa12.12□□□□□ -0.47
TRAF4-215ENST00000584944 ALDH16A1Q8IZ83 802 aa12.12□□□□□ -0.47
TRAF4-215ENST00000584944 PIAS4Q8N2W9 510 aaPredicted RBP12.12□□□□□ -0.47
TRAF4-215ENST00000584944 GALNT4Q8N4A0 578 aa12.12□□□□□ -0.47
TRAF4-215ENST00000584944 SLC37A3Q8NCC5 494 aa12.12□□□□□ -0.47
TRAF4-215ENST00000584944 ZNF555Q8NEP9 628 aa12.12□□□□□ -0.47
TRAF4-215ENST00000584944 OR9Q1Q8NGQ5 310 aa12.12□□□□□ -0.47
TRAF4-215ENST00000584944 OR2AJ1Q8NGZ0 328 aa12.12□□□□□ -0.47
TRAF4-215ENST00000584944 PLPPR2Q96GM1 343 aa12.12□□□□□ -0.47
TRAF4-215ENST00000584944 RADILQ96JH8 1075 aa12.12□□□□□ -0.47
TRAF4-215ENST00000584944 FOXN4Q96NZ1 517 aa12.12□□□□□ -0.47
TRAF4-215ENST00000584944 VCX3BQ9H321 246 aa12.12□□□□□ -0.47
TRAF4-215ENST00000584944 FN3KQ9H479 309 aa12.12□□□□□ -0.47
TRAF4-215ENST00000584944 SLC25A19Q9HC21 320 aa12.12□□□□□ -0.47
TRAF4-215ENST00000584944 USE1Q9NZ43 259 aa12.12□□□□□ -0.47
TRAF4-215ENST00000584944 COA3Q9Y2R0 106 aaPredicted RBP12.12□□□□□ -0.47
TRAF4-215ENST00000584944 SLC25A15Q9Y619 301 aa12.12□□□□□ -0.47
TRAF4-215ENST00000584944 FKBP7Q9Y680 259 aa12.12□□□□□ -0.47
TRAF4-215ENST00000584944 ANKHD1Q8IWZ3 2542 aaKnown RBP12.11□□□□□ -0.47
TRAF4-215ENST00000584944 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.11□□□□□ -0.47
TRAF4-215ENST00000584944 OR6C68A6NDL8 312 aa12.11□□□□□ -0.47
TRAF4-215ENST00000584944 FAM171A2A8MVW0 826 aa12.11□□□□□ -0.47
TRAF4-215ENST00000584944 CRYAAP02489 173 aa12.11□□□□□ -0.47
TRAF4-215ENST00000584944 TP53P04637 393 aaPredicted RBP12.11□□□□□ -0.47
TRAF4-215ENST00000584944 THBDP07204 575 aa12.11□□□□□ -0.47
TRAF4-215ENST00000584944 FMO3P31513 532 aa12.11□□□□□ -0.47
TRAF4-215ENST00000584944 IDH3GP51553 393 aaPredicted RBP12.11□□□□□ -0.47
TRAF4-215ENST00000584944 RAB1AP62820 205 aa12.11□□□□□ -0.47
TRAF4-215ENST00000584944 CDK5Q00535 292 aa12.11□□□□□ -0.47
TRAF4-215ENST00000584944 SLC34A1Q06495 639 aa12.11□□□□□ -0.47
TRAF4-215ENST00000584944 ZIK1Q3SY52 487 aaPredicted RBP12.11□□□□□ -0.47
TRAF4-215ENST00000584944 FAM27BQ5VT28 67 aa12.11□□□□□ -0.47
TRAF4-215ENST00000584944 PLBD1Q6P4A8 553 aa12.11□□□□□ -0.47
TRAF4-215ENST00000584944 SLC22A25Q6T423 547 aa12.11□□□□□ -0.47
TRAF4-215ENST00000584944 ZNF627Q7L945 461 aa12.11□□□□□ -0.47
TRAF4-215ENST00000584944 MDP1Q86V88 176 aa12.11□□□□□ -0.47
TRAF4-215ENST00000584944 SKA3Q8IX90 412 aa12.11□□□□□ -0.47
TRAF4-215ENST00000584944 NPEPL1Q8NDH3 523 aa12.11□□□□□ -0.47
TRAF4-215ENST00000584944 HTRA1Q92743 480 aa12.11□□□□□ -0.47
TRAF4-215ENST00000584944 TSSK2Q96PF2 358 aa12.11□□□□□ -0.47
TRAF4-215ENST00000584944 GRIP2Q9C0E4 1043 aa12.11□□□□□ -0.47
TRAF4-215ENST00000584944 RACGAP1Q9H0H5 632 aa12.11□□□□□ -0.47
TRAF4-215ENST00000584944 OR51V1Q9H2C8 321 aa12.11□□□□□ -0.47
TRAF4-215ENST00000584944 CLEC4MQ9H2X3 399 aaPredicted RBP12.11□□□□□ -0.47
TRAF4-215ENST00000584944 B9D1Q9UPM9 204 aa12.11□□□□□ -0.47
TRAF4-215ENST00000584944 TIMM10BQ9Y5J6 103 aa12.11□□□□□ -0.47
TRAF4-215ENST00000584944 SURF4O15260 269 aa12.1□□□□□ -0.47
TRAF4-215ENST00000584944 CST2P09228 141 aa12.1□□□□□ -0.47
TRAF4-215ENST00000584944 CBR1P16152 277 aa12.1□□□□□ -0.47
TRAF4-215ENST00000584944 ZNF133P52736 654 aaPredicted RBP12.1□□□□□ -0.47
TRAF4-215ENST00000584944 GALK2Q01415 458 aa12.1□□□□□ -0.47
TRAF4-215ENST00000584944 BSPH1Q075Z2 132 aa12.1□□□□□ -0.47
TRAF4-215ENST00000584944 SCRN3Q0VDG4 424 aa12.1□□□□□ -0.47
TRAF4-215ENST00000584944 ETFDHQ16134 617 aa12.1□□□□□ -0.47
TRAF4-215ENST00000584944 LCN1P1Q5VSP4 162 aa12.1□□□□□ -0.47
TRAF4-215ENST00000584944 LPCAT4Q643R3 524 aa12.1□□□□□ -0.47
TRAF4-215ENST00000584944 ACSM5Q6NUN0 579 aa12.1□□□□□ -0.47
TRAF4-215ENST00000584944 CXXC5Q7LFL8 322 aaKnown RBP12.1□□□□□ -0.47
TRAF4-215ENST00000584944 OR6V1Q8N148 313 aa12.1□□□□□ -0.47
TRAF4-215ENST00000584944 PACRGLQ8N7B6 248 aa12.1□□□□□ -0.47
TRAF4-215ENST00000584944 WDR31Q8NA23 367 aa12.1□□□□□ -0.47
TRAF4-215ENST00000584944 IL17RDQ8NFM7 739 aa12.1□□□□□ -0.47
TRAF4-215ENST00000584944 OR1J2Q8NGS2 313 aa12.1□□□□□ -0.47
TRAF4-215ENST00000584944 NMD3Q96D46 503 aaKnown RBP12.1□□□□□ -0.47
TRAF4-215ENST00000584944 BOD1Q96IK1 185 aa12.1□□□□□ -0.47
TRAF4-215ENST00000584944 GABARAPL3Q9BY60 117 aa12.1□□□□□ -0.47
TRAF4-215ENST00000584944 C1orf198Q9H425 327 aa12.1□□□□□ -0.47
TRAF4-215ENST00000584944 RNPEPL1Q9HAU8 725 aa12.1□□□□□ -0.47
TRAF4-215ENST00000584944 EMC7Q9NPA0 242 aa12.1□□□□□ -0.47
TRAF4-215ENST00000584944 POLE4Q9NR33 117 aa12.1□□□□□ -0.47
TRAF4-215ENST00000584944 SMPD3Q9NY59 655 aaPredicted RBP12.1□□□□□ -0.47
TRAF4-215ENST00000584944 TMEFF2Q9UIK5 374 aaPredicted RBP12.1□□□□□ -0.47
TRAF4-215ENST00000584944 RNF115Q9Y4L5 304 aa12.1□□□□□ -0.47
TRAF4-215ENST00000584944 SPEF1Q9Y4P9 236 aa12.1□□□□□ -0.47
TRAF4-215ENST00000584944 UGT2A1Q9Y4X1 527 aa12.1□□□□□ -0.47
TRAF4-215ENST00000584944 FREM1Q5H8C1 2179 aa12.1□□□□□ -0.47
TRAF4-215ENST00000584944 IGKV1D-43A0A0B4J1Z2 117 aa12.09□□□□□ -0.47
TRAF4-215ENST00000584944 FAM183AA6NL82 134 aa12.09□□□□□ -0.47
TRAF4-215ENST00000584944 VSTM5A8MXK1 200 aa12.09□□□□□ -0.47
TRAF4-215ENST00000584944 ABCD4O14678 606 aa12.09□□□□□ -0.47
TRAF4-215ENST00000584944 TLX2O43763 284 aaPredicted RBP12.09□□□□□ -0.47
TRAF4-215ENST00000584944 GYPBP06028 91 aa12.09□□□□□ -0.47
TRAF4-215ENST00000584944 SPI1P17947 270 aa12.09□□□□□ -0.47
TRAF4-215ENST00000584944 PEX2P28328 305 aa12.09□□□□□ -0.47
TRAF4-215ENST00000584944 PYCR1P32322 319 aa12.09□□□□□ -0.47
TRAF4-215ENST00000584944 APLNRP35414 380 aa12.09□□□□□ -0.47
TRAF4-215ENST00000584944 SLC25A1P53007 311 aa12.09□□□□□ -0.47
TRAF4-215ENST00000584944 ADAM8P78325 824 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms