RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 RAG2P55895 527 aa11.25□□□□□ -0.61
COPS3-218ENST00000584216 PPP1CBP62140 327 aa11.25□□□□□ -0.61
COPS3-218ENST00000584216 MRPS34P82930 218 aaKnown RBP11.25□□□□□ -0.61
COPS3-218ENST00000584216 PAX8Q06710 450 aa11.25□□□□□ -0.61
COPS3-218ENST00000584216 KRT71Q3SY84 523 aa11.25□□□□□ -0.61
COPS3-218ENST00000584216 MTX3Q5HYI7 312 aa11.25□□□□□ -0.61
COPS3-218ENST00000584216 LINC00114Q6XXX2 140 aa11.25□□□□□ -0.61
COPS3-218ENST00000584216 NANOGNBQ7Z5D8 188 aa11.25□□□□□ -0.61
COPS3-218ENST00000584216 ZNF283Q8N7M2 679 aa11.25□□□□□ -0.61
COPS3-218ENST00000584216 ABHD4Q8TB40 342 aa11.25□□□□□ -0.61
COPS3-218ENST00000584216 ZDHHC16Q969W1 377 aa11.25□□□□□ -0.61
COPS3-218ENST00000584216 POM121L2Q96KW2 1035 aa11.25□□□□□ -0.61
COPS3-218ENST00000584216 SAMD8Q96LT4 415 aa11.25□□□□□ -0.61
COPS3-218ENST00000584216 MCHR1Q99705 422 aa11.25□□□□□ -0.61
COPS3-218ENST00000584216 PKP2Q99959 881 aa11.25□□□□□ -0.61
COPS3-218ENST00000584216 SMURF2Q9HAU4 748 aa11.25□□□□□ -0.61
COPS3-218ENST00000584216 THAP1Q9NVV9 213 aa11.25□□□□□ -0.61
COPS3-218ENST00000584216 F5H0A9 414 aaPredicted RBP11.24□□□□□ -0.61
COPS3-218ENST00000584216 IFNL4K9M1U5 179 aa11.24□□□□□ -0.61
COPS3-218ENST00000584216 ICMTO60725 284 aa11.24□□□□□ -0.61
COPS3-218ENST00000584216 PLATP00750 562 aa11.24□□□□□ -0.61
COPS3-218ENST00000584216 GSTM3P21266 225 aa11.24□□□□□ -0.61
COPS3-218ENST00000584216 TUBG1P23258 451 aa11.24□□□□□ -0.61
COPS3-218ENST00000584216 WNT5AP41221 380 aa11.24□□□□□ -0.61
COPS3-218ENST00000584216 BPIFB3P59826 476 aa11.24□□□□□ -0.61
COPS3-218ENST00000584216 CDK5R2Q13319 367 aa11.24□□□□□ -0.61
COPS3-218ENST00000584216 SCARB2Q14108 478 aa11.24□□□□□ -0.61
COPS3-218ENST00000584216 PDCD1Q15116 288 aa11.24□□□□□ -0.61
COPS3-218ENST00000584216 TAF11Q15544 211 aa11.24□□□□□ -0.61
COPS3-218ENST00000584216 C10orf128Q5T292 105 aa11.24□□□□□ -0.61
COPS3-218ENST00000584216 OLFML2AQ68BL7 652 aa11.24□□□□□ -0.61
COPS3-218ENST00000584216 VANGL1Q8TAA9 524 aaPredicted RBP11.24□□□□□ -0.61
COPS3-218ENST00000584216 UPRTQ96BW1 309 aa11.24□□□□□ -0.61
COPS3-218ENST00000584216 PLEKHA8Q96JA3 519 aa11.24□□□□□ -0.61
COPS3-218ENST00000584216 MPP4Q96JB8 637 aa11.24□□□□□ -0.61
COPS3-218ENST00000584216 MAELQ96JY0 434 aaKnown RBP11.24□□□□□ -0.61
COPS3-218ENST00000584216 MAGEB18Q96M61 343 aa11.24□□□□□ -0.61
COPS3-218ENST00000584216 ZNF347Q96SE7 839 aa11.24□□□□□ -0.61
COPS3-218ENST00000584216 ARHGDIGQ99819 225 aa11.24□□□□□ -0.61
COPS3-218ENST00000584216 CITED1Q99966 193 aa11.24□□□□□ -0.61
COPS3-218ENST00000584216 PAIP2Q9BPZ3 127 aaKnown RBP11.24□□□□□ -0.61
COPS3-218ENST00000584216 SLC30A2Q9BRI3 323 aa11.24□□□□□ -0.61
COPS3-218ENST00000584216 SSBP3Q9BWW4 388 aaPredicted RBP11.24□□□□□ -0.61
COPS3-218ENST00000584216 MRPL13Q9BYD1 178 aaKnown RBP11.24□□□□□ -0.61
COPS3-218ENST00000584216 TMEM38AQ9H6F2 299 aa11.24□□□□□ -0.61
COPS3-218ENST00000584216 MSL2Q9HCI7 577 aa11.24□□□□□ -0.61
COPS3-218ENST00000584216 KCNK9Q9NPC2 374 aa11.24□□□□□ -0.61
COPS3-218ENST00000584216 TUBG2Q9NRH3 451 aa11.24□□□□□ -0.61
COPS3-218ENST00000584216 MAN2C1Q9NTJ4 1040 aa11.24□□□□□ -0.61
COPS3-218ENST00000584216 PDP1Q9P0J1 537 aaPredicted RBP11.24□□□□□ -0.61
COPS3-218ENST00000584216 KLHL21Q9UJP4 597 aa11.24□□□□□ -0.61
COPS3-218ENST00000584216 ANGPT4Q9Y264 503 aa11.24□□□□□ -0.61
COPS3-218ENST00000584216 TRAV40A0A0B4J280 105 aa11.23□□□□□ -0.61
COPS3-218ENST00000584216 FAM181BA6NEQ2 426 aa11.23□□□□□ -0.61
COPS3-218ENST00000584216 SRRM5B3KS81 715 aa11.23□□□□□ -0.61
COPS3-218ENST00000584216 BLOC1S5-TXNDC5H3BN57 136 aa11.23□□□□□ -0.61
COPS3-218ENST00000584216 HOXA3O43365 443 aaPredicted RBP11.23□□□□□ -0.61
COPS3-218ENST00000584216 TPST2O60704 377 aa11.23□□□□□ -0.61
COPS3-218ENST00000584216 NDUFA7O95182 113 aa11.23□□□□□ -0.61
COPS3-218ENST00000584216 NGFP01138 241 aa11.23□□□□□ -0.61
COPS3-218ENST00000584216 ASAH2BP0C7U1 165 aa11.23□□□□□ -0.61
COPS3-218ENST00000584216 IGHV4-38-2P0DP08 117 aa11.23□□□□□ -0.61
COPS3-218ENST00000584216 KITP10721 976 aa11.23□□□□□ -0.61
COPS3-218ENST00000584216 ACADSP16219 412 aa11.23□□□□□ -0.61
COPS3-218ENST00000584216 ZNF32P17041 273 aa11.23□□□□□ -0.61
COPS3-218ENST00000584216 GUCA1AP43080 201 aaPredicted RBP11.23□□□□□ -0.61
COPS3-218ENST00000584216 ZNF133P52736 654 aaPredicted RBP11.23□□□□□ -0.61
COPS3-218ENST00000584216 RPL15P61313 204 aaKnown RBP11.23□□□□□ -0.61
COPS3-218ENST00000584216 PCBD1P61457 104 aa11.23□□□□□ -0.61
COPS3-218ENST00000584216 SEC61A1P61619 476 aaKnown RBP11.23□□□□□ -0.61
COPS3-218ENST00000584216 ZMYND11Q15326 602 aa11.23□□□□□ -0.61
COPS3-218ENST00000584216 SLC2A7Q6PXP3 512 aa11.23□□□□□ -0.61
COPS3-218ENST00000584216 RFPL4BQ6ZWI9 263 aa11.23□□□□□ -0.61
COPS3-218ENST00000584216 KIR3DL3Q8N743 410 aa11.23□□□□□ -0.61
COPS3-218ENST00000584216 NPEPL1Q8NDH3 523 aa11.23□□□□□ -0.61
COPS3-218ENST00000584216 OR9I1Q8NGQ6 314 aa11.23□□□□□ -0.61
COPS3-218ENST00000584216 SEPHS2Q99611 448 aa11.23□□□□□ -0.61
COPS3-218ENST00000584216 RSPO3Q9BXY4 272 aaPredicted RBP11.23□□□□□ -0.61
COPS3-218ENST00000584216 NOX4Q9NPH5 578 aa11.23□□□□□ -0.61
COPS3-218ENST00000584216 IL19Q9UHD0 177 aa11.23□□□□□ -0.61
COPS3-218ENST00000584216 PPP1R3CQ9UQK1 317 aa11.23□□□□□ -0.61
COPS3-218ENST00000584216 LOC100509620A0A075B734 347 aa11.22□□□□□ -0.61
COPS3-218ENST00000584216 EVPLLA8MZ36 301 aa11.22□□□□□ -0.61
COPS3-218ENST00000584216 KPNA4O00629 521 aaPredicted RBP11.22□□□□□ -0.61
COPS3-218ENST00000584216 HOXB9P17482 250 aaPredicted RBP11.22□□□□□ -0.61
COPS3-218ENST00000584216 AQP1P29972 269 aa11.22□□□□□ -0.61
COPS3-218ENST00000584216 CD80P33681 288 aa11.22□□□□□ -0.61
COPS3-218ENST00000584216 STX1BP61266 288 aa11.22□□□□□ -0.61
COPS3-218ENST00000584216 SGCAQ16586 387 aa11.22□□□□□ -0.61
COPS3-218ENST00000584216 ENTPD8Q5MY95 495 aa11.22□□□□□ -0.61
COPS3-218ENST00000584216 LRIF1Q5T3J3 769 aa11.22□□□□□ -0.61
COPS3-218ENST00000584216 TMEM86BQ8N661 226 aa11.22□□□□□ -0.61
COPS3-218ENST00000584216 OR2Z1Q8NG97 314 aa11.22□□□□□ -0.61
COPS3-218ENST00000584216 AKR7LQ8NHP1 331 aa11.22□□□□□ -0.61
COPS3-218ENST00000584216 ADAMTS16Q8TE57 1224 aa11.22□□□□□ -0.61
COPS3-218ENST00000584216 C4orf45Q96LM5 186 aa11.22□□□□□ -0.61
COPS3-218ENST00000584216 PRDM13Q9H4Q3 707 aa11.22□□□□□ -0.61
COPS3-218ENST00000584216 KIF17Q9P2E2 1029 aa11.22□□□□□ -0.61
COPS3-218ENST00000584216 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.22□□□□□ -0.61
COPS3-218ENST00000584216 WNK2Q9Y3S1 2297 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms